Protein–RNA interactions for Protein: P54829

PTPN5, Tyrosine-protein phosphatase non-receptor type 5, humanhuman

Predictions only

Length 565 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PTPN5P54829 PRMT1-201ENST00000391851 1393 ntAPPRIS P1 TSL 1 (best) BASIC20.17■□□□□ 0.82
PTPN5P54829 HABP4-201ENST00000375249 2615 ntAPPRIS P1 TSL 1 (best) BASIC20.17■□□□□ 0.82
PTPN5P54829 SP3-208ENST00000640958 2142 ntAPPRIS ALT2 TSL 1 (best) BASIC20.17■□□□□ 0.82
PTPN5P54829 UBE2L6-202ENST00000340573 1573 ntTSL 1 (best) BASIC20.17■□□□□ 0.82
PTPN5P54829 ZNF668-207ENST00000535577 2396 ntAPPRIS P1 TSL 5 BASIC20.16■□□□□ 0.82
PTPN5P54829 MAP2K5-203ENST00000354498 1783 ntTSL 2 BASIC20.16■□□□□ 0.82
PTPN5P54829 E2F1-201ENST00000343380 2503 ntAPPRIS P1 TSL 1 (best) BASIC20.16■□□□□ 0.82
PTPN5P54829 XBP1-203ENST00000403532 1824 ntAPPRIS ALT1 TSL 3 BASIC20.16■□□□□ 0.82
PTPN5P54829 SNUPN-205ENST00000564644 1931 ntAPPRIS P1 TSL 2 BASIC20.16■□□□□ 0.82
PTPN5P54829 FAM129C-207ENST00000599124 1918 ntAPPRIS ALT2 TSL 1 (best) BASIC20.16■□□□□ 0.82
PTPN5P54829 SDHA-220ENST00000617470 1952 ntTSL 5 BASIC20.16■□□□□ 0.82
PTPN5P54829 PKMYT1-204ENST00000440027 2061 ntTSL 2 BASIC20.16■□□□□ 0.82
PTPN5P54829 DCAKD-208ENST00000614054 2054 ntAPPRIS P1 TSL 2 BASIC20.16■□□□□ 0.82
PTPN5P54829 INS-201ENST00000250971 503 ntAPPRIS P1 TSL 1 (best) BASIC20.16■□□□□ 0.82
PTPN5P54829 GPR32-201ENST00000270590 1269 ntAPPRIS P1 BASIC20.16■□□□□ 0.82
PTPN5P54829 MRPL43-205ENST00000370234 798 ntTSL 1 (best) BASIC20.16■□□□□ 0.82
PTPN5P54829 GNG5-202ENST00000370645 790 ntAPPRIS P1 TSL 2 BASIC20.16■□□□□ 0.82
PTPN5P54829 AC008878.4-201ENST00000602083 293 ntTSL 5 BASIC20.16■□□□□ 0.82
PTPN5P54829 AL138966.2-201ENST00000621997 464 ntBASIC20.16■□□□□ 0.82
PTPN5P54829 FP475955.1-201ENST00000624937 553 ntTSL 4 BASIC20.16■□□□□ 0.82
PTPN5P54829 CD8B-203ENST00000390655 1417 ntAPPRIS P2 TSL 1 (best) BASIC20.16■□□□□ 0.82
PTPN5P54829 SAAL1-204ENST00000529318 1503 ntAPPRIS ALT1 TSL 5 BASIC20.16■□□□□ 0.82
PTPN5P54829 SNX7-205ENST00000529992 1589 ntTSL 2 BASIC20.16■□□□□ 0.82
PTPN5P54829 CD55-203ENST00000367063 1691 ntAPPRIS ALT2 TSL 1 (best) BASIC20.16■□□□□ 0.82
PTPN5P54829 LSM4-203ENST00000593829 1908 ntAPPRIS P1 TSL 1 (best) BASIC20.15■□□□□ 0.82
PTPN5P54829 INTS12-206ENST00000451321 1975 ntTSL 1 (best) BASIC20.15■□□□□ 0.82
PTPN5P54829 ARSE-205ENST00000540563 1990 ntTSL 2 BASIC20.15■□□□□ 0.82
PTPN5P54829 TMC7-205ENST00000569532 2738 ntTSL 2 BASIC20.15■□□□□ 0.82
PTPN5P54829 KRT17P2-202ENST00000326333 1174 ntTSL 2 BASIC20.15■□□□□ 0.82
PTPN5P54829 TCEAL2-201ENST00000329035 1080 ntAPPRIS P1 TSL 5 BASIC20.15■□□□□ 0.82
PTPN5P54829 DYNLT3-203ENST00000432389 719 ntTSL 5 BASIC20.15■□□□□ 0.82
PTPN5P54829 MCRIP1-201ENST00000455127 1209 ntAPPRIS P1 TSL 1 (best) BASIC20.15■□□□□ 0.82
PTPN5P54829 AC106771.1-201ENST00000502209 372 ntTSL 2 BASIC20.15■□□□□ 0.82
PTPN5P54829 C17orf49-208ENST00000552402 760 ntTSL 2 BASIC20.15■□□□□ 0.82
PTPN5P54829 TXNDC12-205ENST00000610127 806 ntTSL 2 BASIC20.15■□□□□ 0.82
PTPN5P54829 mascRNA-menRNA.2-201ENST00000616984 58 ntBASIC20.15■□□□□ 0.82
PTPN5P54829 AC116407.4-201ENST00000623319 1061 ntBASIC20.15■□□□□ 0.82
PTPN5P54829 AC012313.10-201ENST00000623509 926 ntBASIC20.15■□□□□ 0.82
PTPN5P54829 LRRC23-207ENST00000433346 1387 ntTSL 5 BASIC20.15■□□□□ 0.82
PTPN5P54829 LINC02381-201ENST00000508564 1369 ntTSL 1 (best) BASIC20.15■□□□□ 0.82
PTPN5P54829 PDLIM2-221ENST00000622702 1490 ntTSL 5 BASIC20.15■□□□□ 0.82
PTPN5P54829 SETD6-201ENST00000219315 1553 ntAPPRIS ALT2 TSL 1 (best) BASIC20.15■□□□□ 0.82
PTPN5P54829 GCSH-201ENST00000315467 1597 ntAPPRIS P1 TSL 1 (best) BASIC20.15■□□□□ 0.82
PTPN5P54829 RHNO1-204ENST00000489288 1870 ntAPPRIS P3 TSL 1 (best) BASIC20.15■□□□□ 0.82
PTPN5P54829 GAS2-202ENST00000454584 2286 ntAPPRIS P1 TSL 1 (best) BASIC20.15■□□□□ 0.82
PTPN5P54829 MAP7-206ENST00000611373 2317 ntAPPRIS ALT2 TSL 5 BASIC20.15■□□□□ 0.82
PTPN5P54829 FAM171A2-201ENST00000293443 3160 ntAPPRIS P1 TSL 1 (best) BASIC20.15■□□□□ 0.82
PTPN5P54829 MTURN-201ENST00000324453 5937 ntAPPRIS P1 TSL 1 (best) BASIC20.14■□□□□ 0.82
PTPN5P54829 BSN-AS2-201ENST00000421598 2603 ntTSL 2 BASIC20.14■□□□□ 0.82
PTPN5P54829 TTC39C-202ENST00000317571 2442 ntAPPRIS ALT2 TSL 1 (best) BASIC20.14■□□□□ 0.82
PTPN5P54829 DBNL-220ENST00000494774 2117 ntAPPRIS P4 TSL 1 (best) BASIC20.14■□□□□ 0.81
PTPN5P54829 MFSD10-206ENST00000508221 1639 ntTSL 5 BASIC20.14■□□□□ 0.81
PTPN5P54829 MAZ-214ENST00000568544 1464 ntTSL 2 BASIC20.14■□□□□ 0.81
PTPN5P54829 AL445686.2-201ENST00000577528 1445 ntTSL 3 BASIC20.14■□□□□ 0.81
PTPN5P54829 TMEM243-201ENST00000257637 1063 ntAPPRIS P1 TSL 1 (best) BASIC20.14■□□□□ 0.81
PTPN5P54829 AP2S1-202ENST00000352203 793 ntTSL 2 BASIC20.14■□□□□ 0.81
PTPN5P54829 MCFD2-203ENST00000409147 671 ntTSL 2 BASIC20.14■□□□□ 0.81
PTPN5P54829 AL139246.2-201ENST00000456687 1297 ntTSL 5 BASIC20.14■□□□□ 0.81
PTPN5P54829 LIME1-205ENST00000480139 819 ntAPPRIS ALT2 TSL 3 BASIC20.14■□□□□ 0.81
PTPN5P54829 ELAC2-212ENST00000578071 579 ntTSL 4 BASIC20.14■□□□□ 0.81
PTPN5P54829 RNF165-206ENST00000590330 1049 ntTSL 2 BASIC20.14■□□□□ 0.81
PTPN5P54829 AP2S1-204ENST00000597020 707 ntTSL 1 (best) BASIC20.14■□□□□ 0.81
PTPN5P54829 AC004816.2-201ENST00000622856 284 ntTSL 5 BASIC20.14■□□□□ 0.81
PTPN5P54829 IRX2-201ENST00000302057 2456 ntAPPRIS P1 TSL 1 (best) BASIC20.14■□□□□ 0.81
PTPN5P54829 KCNS3-201ENST00000304101 2333 ntAPPRIS P1 TSL 1 (best) BASIC20.14■□□□□ 0.81
PTPN5P54829 ZNF331-202ENST00000411977 2248 ntAPPRIS P1 TSL 1 (best) BASIC20.14■□□□□ 0.81
PTPN5P54829 AC073314.1-201ENST00000568729 2216 ntBASIC20.14■□□□□ 0.81
PTPN5P54829 TCP11-202ENST00000311875 2166 ntAPPRIS ALT2 TSL 1 (best) BASIC20.14■□□□□ 0.81
PTPN5P54829 CHRNA3-202ENST00000348639 2030 ntTSL 1 (best) BASIC20.14■□□□□ 0.81
PTPN5P54829 NECAB3-201ENST00000246190 1989 ntTSL 5 BASIC20.14■□□□□ 0.81
PTPN5P54829 PCSK6-217ENST00000618548 4269 ntAPPRIS ALT2 TSL 1 (best) BASIC20.13■□□□□ 0.81
PTPN5P54829 IKZF1-209ENST00000438033 1748 ntTSL 2 BASIC20.13■□□□□ 0.81
PTPN5P54829 ATF5-202ENST00000595125 1637 ntAPPRIS P1 TSL 2 BASIC20.13■□□□□ 0.81
PTPN5P54829 TNFAIP2-209ENST00000560869 4683 ntAPPRIS P1 TSL 5 BASIC20.13■□□□□ 0.81
PTPN5P54829 CYP1B1-207ENST00000614273 2174 ntAPPRIS P1 TSL 5 BASIC20.13■□□□□ 0.81
PTPN5P54829 MRPS15-201ENST00000373116 1006 ntAPPRIS P1 TSL 1 (best) BASIC20.13■□□□□ 0.81
PTPN5P54829 CCT7-202ENST00000398422 1234 ntTSL 2 BASIC20.13■□□□□ 0.81
PTPN5P54829 IL17RC-205ENST00000413608 2147 ntAPPRIS ALT2 TSL 1 (best) BASIC20.13■□□□□ 0.81
PTPN5P54829 HIGD1A-204ENST00000452906 585 ntTSL 2 BASIC20.13■□□□□ 0.81
PTPN5P54829 HOMER2P1-201ENST00000455653 964 ntBASIC20.13■□□□□ 0.81
PTPN5P54829 AL162258.2-202ENST00000469931 831 ntTSL 5 BASIC20.13■□□□□ 0.81
PTPN5P54829 NECTIN3-AS1-204ENST00000476301 568 ntTSL 4 BASIC20.13■□□□□ 0.81
PTPN5P54829 STK32A-AS1-201ENST00000504297 863 ntTSL 3 BASIC20.13■□□□□ 0.81
PTPN5P54829 TMEM218-206ENST00000527766 812 ntAPPRIS P1 TSL 3 BASIC20.13■□□□□ 0.81
PTPN5P54829 AC008738.3-201ENST00000589932 659 ntTSL 2 BASIC20.13■□□□□ 0.81
PTPN5P54829 C17orf67-201ENST00000397861 2013 ntAPPRIS P1 TSL 1 (best) BASIC20.13■□□□□ 0.81
PTPN5P54829 ARHGDIA-201ENST00000269321 1906 ntAPPRIS P1 TSL 1 (best) BASIC20.13■□□□□ 0.81
PTPN5P54829 RNH1-202ENST00000356187 1791 ntAPPRIS P1 TSL 1 (best) BASIC20.13■□□□□ 0.81
PTPN5P54829 JDP2-201ENST00000267569 1700 ntTSL 1 (best) BASIC20.13■□□□□ 0.81
PTPN5P54829 ZNF821-211ENST00000564134 1748 ntTSL 5 BASIC20.13■□□□□ 0.81
PTPN5P54829 MON1A-201ENST00000296473 2370 ntAPPRIS P3 TSL 1 (best) BASIC20.13■□□□□ 0.81
PTPN5P54829 ATPAF2-206ENST00000474627 1564 ntAPPRIS P1 TSL 1 (best) BASIC20.12■□□□□ 0.81
PTPN5P54829 CHRM4-201ENST00000433765 1511 ntAPPRIS P1 BASIC20.12■□□□□ 0.81
PTPN5P54829 BACE1-209ENST00000513780 1465 ntTSL 1 (best) BASIC20.12■□□□□ 0.81
PTPN5P54829 RFXANK-201ENST00000303088 1407 ntAPPRIS P1 TSL 1 (best) BASIC20.12■□□□□ 0.81
PTPN5P54829 FAM170B-201ENST00000311787 1401 ntAPPRIS P1 TSL 1 (best) BASIC20.12■□□□□ 0.81
PTPN5P54829 ACY1-206ENST00000476351 1409 ntTSL 3 BASIC20.12■□□□□ 0.81
PTPN5P54829 UPF1-207ENST00000599848 5311 ntTSL 1 (best) BASIC20.12■□□□□ 0.81
PTPN5P54829 CRELD2-201ENST00000328268 1357 ntAPPRIS P3 TSL 1 (best) BASIC20.12■□□□□ 0.81
PTPN5P54829 BUB3-201ENST00000368858 1361 ntAPPRIS ALT1 TSL 1 (best) BASIC20.12■□□□□ 0.81
Retrieved 100 of 98,524 protein–RNA pairs in 48.7 ms