Protein–RNA interactions for Protein: P49458

SRP9, Signal recognition particle 9 kDa protein, humanhuman

Known RBP Predictions only

Length 86 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SRP9P49458 COA6-202ENST00000366613 641 ntTSL 1 (best) BASIC17.27■□□□□ 0.36
SRP9P49458 SMNDC1-201ENST00000369592 1110 ntAPPRIS P1 TSL 3 BASIC17.27■□□□□ 0.36
SRP9P49458 C20orf196-202ENST00000378979 585 ntTSL 2 BASIC17.27■□□□□ 0.36
SRP9P49458 GUSBP6-202ENST00000438529 1198 ntBASIC17.27■□□□□ 0.36
SRP9P49458 DNAJA4-210ENST00000489435 947 ntTSL 3 BASIC17.27■□□□□ 0.36
SRP9P49458 FBXL8-203ENST00000518148 1054 ntTSL 2 BASIC17.27■□□□□ 0.36
SRP9P49458 BEAN1-AS1-201ENST00000564618 533 ntTSL 4 BASIC17.27■□□□□ 0.36
SRP9P49458 AC138028.5-201ENST00000566114 558 ntTSL 5 BASIC17.27■□□□□ 0.36
SRP9P49458 MAGIX-202ENST00000595224 1238 ntAPPRIS P2 TSL 5 BASIC17.27■□□□□ 0.36
SRP9P49458 ST3GAL5-202ENST00000377332 2165 ntTSL 5 BASIC17.27■□□□□ 0.36
SRP9P49458 ANKRD65-204ENST00000520296 1632 ntTSL 1 (best) BASIC17.27■□□□□ 0.36
SRP9P49458 KMT5B-206ENST00000405515 2869 ntTSL 5 BASIC17.27■□□□□ 0.36
SRP9P49458 SMARCC2-203ENST00000394023 4271 ntAPPRIS ALT2 TSL 1 (best) BASIC17.27■□□□□ 0.35
SRP9P49458 CDK18-217ENST00000506784 2143 ntTSL 1 (best) BASIC17.27■□□□□ 0.35
SRP9P49458 NBL1-212ENST00000621723 2133 ntAPPRIS P3 TSL 2 BASIC17.27■□□□□ 0.35
SRP9P49458 ADAP1-205ENST00000449296 2093 ntTSL 2 BASIC17.27■□□□□ 0.35
SRP9P49458 CCDC17-202ENST00000421127 2216 ntAPPRIS ALT2 TSL 2 BASIC17.27■□□□□ 0.35
SRP9P49458 RAB28-201ENST00000288723 1810 ntAPPRIS P3 TSL 1 (best) BASIC17.26■□□□□ 0.35
SRP9P49458 MYH7B-201ENST00000262873 6293 ntAPPRIS P2 TSL 1 (best) BASIC17.26■□□□□ 0.35
SRP9P49458 CNRIP1-201ENST00000263655 1953 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
SRP9P49458 CD8A-202ENST00000352580 1977 ntAPPRIS ALT2 TSL 2 BASIC17.26■□□□□ 0.35
SRP9P49458 ACAT1-201ENST00000265838 1761 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
SRP9P49458 EXTL3-213ENST00000523149 1779 ntTSL 5 BASIC17.26■□□□□ 0.35
SRP9P49458 MAPK8IP3-202ENST00000356010 4456 ntTSL 5 BASIC17.26■□□□□ 0.35
SRP9P49458 SNAI3-AS1-202ENST00000563475 2081 ntTSL 1 (best) BASIC17.26■□□□□ 0.35
SRP9P49458 SENP6-202ENST00000370010 4644 ntAPPRIS P3 TSL 1 (best) BASIC17.26■□□□□ 0.35
SRP9P49458 CLDN3-201ENST00000395145 1274 ntAPPRIS P1 BASIC17.26■□□□□ 0.35
SRP9P49458 ALKBH6-212ENST00000485128 959 ntTSL 5 BASIC17.26■□□□□ 0.35
SRP9P49458 TP53I11-215ENST00000531928 1078 ntTSL 3 BASIC17.26■□□□□ 0.35
SRP9P49458 ANAPC11-208ENST00000572851 686 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
SRP9P49458 PAQR4-205ENST00000576565 842 ntTSL 2 BASIC17.26■□□□□ 0.35
SRP9P49458 AC092118.2-201ENST00000613495 667 ntBASIC17.26■□□□□ 0.35
SRP9P49458 AC000035.1-201ENST00000634116 343 ntTSL 5 BASIC17.26■□□□□ 0.35
SRP9P49458 KRT8P36-201ENST00000489121 1440 ntBASIC17.26■□□□□ 0.35
SRP9P49458 CCS-208ENST00000533244 1430 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
SRP9P49458 EPS8L1-209ENST00000588359 1407 ntTSL 5 BASIC17.26■□□□□ 0.35
SRP9P49458 AMZ1-202ENST00000407112 1862 ntTSL 2 BASIC17.26■□□□□ 0.35
SRP9P49458 MMP9-201ENST00000372330 2336 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
SRP9P49458 SBNO2-201ENST00000361757 4923 ntAPPRIS P4 TSL 1 (best) BASIC17.25■□□□□ 0.35
SRP9P49458 GPR31-201ENST00000366834 2059 ntAPPRIS P1 BASIC17.25■□□□□ 0.35
SRP9P49458 MARC2-201ENST00000359316 1335 ntTSL 1 (best) BASIC17.25■□□□□ 0.35
SRP9P49458 PAQR4-202ENST00000318782 2793 ntAPPRIS P1 TSL 1 (best) BASIC17.25■□□□□ 0.35
SRP9P49458 TWF1-201ENST00000395510 3045 ntAPPRIS P1 TSL 1 (best) BASIC17.25■□□□□ 0.35
SRP9P49458 ARHGAP8-204ENST00000389774 1725 ntAPPRIS ALT2 TSL 2 BASIC17.25■□□□□ 0.35
SRP9P49458 AC138932.1-201ENST00000534164 6830 ntBASIC17.25■□□□□ 0.35
SRP9P49458 ETHE1-201ENST00000292147 963 ntAPPRIS P1 TSL 1 (best) BASIC17.25■□□□□ 0.35
SRP9P49458 FAM72A-203ENST00000367129 676 ntTSL 3 BASIC17.25■□□□□ 0.35
SRP9P49458 NOXO1-203ENST00000397280 1147 ntAPPRIS ALT2 TSL 1 (best) BASIC17.25■□□□□ 0.35
SRP9P49458 AC092171.1-201ENST00000455866 753 ntTSL 2 BASIC17.25■□□□□ 0.35
SRP9P49458 FAM72A-205ENST00000468509 629 ntTSL 5 BASIC17.25■□□□□ 0.35
SRP9P49458 CTBP1-AS2-203ENST00000507044 739 ntTSL 3 BASIC17.25■□□□□ 0.35
SRP9P49458 ATP6V0E2-211ENST00000606024 893 ntTSL 1 (best) BASIC17.25■□□□□ 0.35
SRP9P49458 SEPT8-201ENST00000296873 4394 ntAPPRIS P2 TSL 1 (best) BASIC17.25■□□□□ 0.35
SRP9P49458 GRM5-201ENST00000305432 4475 ntAPPRIS P3 TSL 1 (best) BASIC17.25■□□□□ 0.35
SRP9P49458 BANP-223ENST00000538234 2372 ntAPPRIS P1 TSL 1 (best) BASIC17.25■□□□□ 0.35
SRP9P49458 PHC1-212ENST00000543824 4292 ntAPPRIS P1 TSL 1 (best) BASIC17.25■□□□□ 0.35
SRP9P49458 SEPT8-216ENST00000620483 4335 ntTSL 5 BASIC17.25■□□□□ 0.35
SRP9P49458 NXN-202ENST00000537628 1340 ntTSL 3 BASIC17.24■□□□□ 0.35
SRP9P49458 HNRNPUL1-203ENST00000378215 2864 ntTSL 2 BASIC17.24■□□□□ 0.35
SRP9P49458 TLE3-201ENST00000317509 5207 ntTSL 1 (best) BASIC17.24■□□□□ 0.35
SRP9P49458 XYLT1-201ENST00000261381 9891 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
SRP9P49458 ATG101-201ENST00000336854 1439 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
SRP9P49458 AC074212.1-201ENST00000559756 1402 ntTSL 3 BASIC17.24■□□□□ 0.35
SRP9P49458 RAB4A-201ENST00000366690 2966 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
SRP9P49458 KRT81-201ENST00000327741 1929 ntAPPRIS P2 TSL 1 (best) BASIC17.24■□□□□ 0.35
SRP9P49458 SBK2-201ENST00000344158 1056 ntAPPRIS P1 TSL 2 BASIC17.24■□□□□ 0.35
SRP9P49458 AL355802.2-201ENST00000402069 882 ntBASIC17.24■□□□□ 0.35
SRP9P49458 SBK2-202ENST00000413299 1085 ntAPPRIS P1 TSL 5 BASIC17.24■□□□□ 0.35
SRP9P49458 AL138781.1-201ENST00000566567 1274 ntBASIC17.24■□□□□ 0.35
SRP9P49458 PLK5-204ENST00000588430 900 ntAPPRIS ALT2 TSL 5 BASIC17.24■□□□□ 0.35
SRP9P49458 AC133041.1-202ENST00000642053 222 ntBASIC17.24■□□□□ 0.35
SRP9P49458 ZSWIM4-201ENST00000254323 4339 ntAPPRIS P1 TSL 2 BASIC17.24■□□□□ 0.35
SRP9P49458 KRT17P1-201ENST00000399211 1546 ntBASIC17.24■□□□□ 0.35
SRP9P49458 VMAC-201ENST00000339485 2254 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
SRP9P49458 AL445433.2-201ENST00000425113 2544 ntTSL 2 BASIC17.24■□□□□ 0.35
SRP9P49458 MSLN-201ENST00000382862 2116 ntAPPRIS P3 TSL 5 BASIC17.24■□□□□ 0.35
SRP9P49458 RDH13-203ENST00000415061 1871 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
SRP9P49458 GABRD-213ENST00000640067 1632 ntAPPRIS ALT2 TSL 5 BASIC17.24■□□□□ 0.35
SRP9P49458 RAB7A-201ENST00000265062 2244 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
SRP9P49458 SLC37A2-203ENST00000403796 2910 ntAPPRIS ALT1 TSL 2 BASIC17.24■□□□□ 0.35
SRP9P49458 SMPD3-201ENST00000219334 5453 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
SRP9P49458 BCKDK-202ENST00000287507 1907 ntTSL 1 (best) BASIC17.23■□□□□ 0.35
SRP9P49458 CARMIL2-201ENST00000334583 4687 ntAPPRIS P3 TSL 1 (best) BASIC17.23■□□□□ 0.35
SRP9P49458 KIF16B-206ENST00000636835 5109 ntAPPRIS ALT2 TSL 1 (best) BASIC17.23■□□□□ 0.35
SRP9P49458 PLEKHG5-206ENST00000377748 5221 ntAPPRIS ALT2 TSL 2 BASIC17.23■□□□□ 0.35
SRP9P49458 DYNLT3-201ENST00000378578 2217 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
SRP9P49458 LONP1-215ENST00000593119 2918 ntTSL 2 BASIC17.23■□□□□ 0.35
SRP9P49458 FDXR-204ENST00000442102 1967 ntTSL 2 BASIC17.23■□□□□ 0.35
SRP9P49458 SLC35A3-222ENST00000640715 1989 ntTSL 5 BASIC17.23■□□□□ 0.35
SRP9P49458 NT5C-201ENST00000245552 954 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
SRP9P49458 C16orf74-201ENST00000284245 906 ntAPPRIS P2 TSL 1 (best) BASIC17.23■□□□□ 0.35
SRP9P49458 CUEDC2-201ENST00000369937 1191 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
SRP9P49458 KRTAP5-8-201ENST00000398534 1183 ntAPPRIS P1 BASIC17.23■□□□□ 0.35
SRP9P49458 CD24-202ENST00000610952 802 ntAPPRIS P3 TSL 2 BASIC17.23■□□□□ 0.35
SRP9P49458 IGFBP3-211ENST00000615754 792 ntTSL 5 BASIC17.23■□□□□ 0.35
SRP9P49458 EMX2-203ENST00000553456 2897 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
SRP9P49458 MATK-215ENST00000619596 1740 ntAPPRIS P4 TSL 2 BASIC17.23■□□□□ 0.35
SRP9P49458 ARHGAP23-222ENST00000622683 5964 ntAPPRIS P2 TSL 5 BASIC17.23■□□□□ 0.35
SRP9P49458 MTFP1-201ENST00000266263 1370 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
SRP9P49458 DTD1-201ENST00000377452 1387 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
Retrieved 100 of 98,524 protein–RNA pairs in 29.7 ms