Protein–RNA interactions for Protein: P48443

RXRG, Retinoic acid receptor RXR-gamma, humanhuman

Predictions only

Length 463 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RXRGP48443 METRN-204ENST00000568223 3325 ntAPPRIS P2 TSL 1 (best) BASIC19.51■□□□□ 0.71
RXRGP48443 PRDM1-202ENST00000369091 2612 ntTSL 1 (best) BASIC19.51■□□□□ 0.71
RXRGP48443 ADORA2A-214ENST00000611543 2412 ntAPPRIS P1 TSL 5 BASIC19.51■□□□□ 0.71
RXRGP48443 ME2-216ENST00000639850 2331 ntTSL 5 BASIC19.51■□□□□ 0.71
RXRGP48443 ZNF821-211ENST00000564134 1748 ntTSL 5 BASIC19.51■□□□□ 0.71
RXRGP48443 FAM99A-201ENST00000382167 1432 ntTSL 1 (best) BASIC19.51■□□□□ 0.71
RXRGP48443 C16orf70-201ENST00000219139 2865 ntAPPRIS P1 TSL 1 (best) BASIC19.5■□□□□ 0.71
RXRGP48443 DCAKD-208ENST00000614054 2054 ntAPPRIS P1 TSL 2 BASIC19.5■□□□□ 0.71
RXRGP48443 SLC25A46-202ENST00000447245 1575 ntTSL 2 BASIC19.5■□□□□ 0.71
RXRGP48443 GJC2-201ENST00000366714 2243 ntAPPRIS P1 TSL 1 (best) BASIC19.5■□□□□ 0.71
RXRGP48443 VCY1B-201ENST00000250823 550 ntAPPRIS P1 TSL 1 (best) BASIC19.5■□□□□ 0.71
RXRGP48443 VCY-201ENST00000250825 550 ntAPPRIS P1 TSL 1 (best) BASIC19.5■□□□□ 0.71
RXRGP48443 CLDND2-201ENST00000291715 974 ntAPPRIS P1 TSL 1 (best) BASIC19.5■□□□□ 0.71
RXRGP48443 SNAPIN-201ENST00000368685 1030 ntAPPRIS P1 TSL 1 (best) BASIC19.5■□□□□ 0.71
RXRGP48443 DAB1-202ENST00000371230 1150 ntTSL 5 BASIC19.5■□□□□ 0.71
RXRGP48443 VSIG2-202ENST00000403470 1191 ntTSL 2 BASIC19.5■□□□□ 0.71
RXRGP48443 NIFKP9-201ENST00000419265 221 ntBASIC19.5■□□□□ 0.71
RXRGP48443 TMPOP1-202ENST00000424642 1267 ntBASIC19.5■□□□□ 0.71
RXRGP48443 Z98884.1-201ENST00000451646 830 ntTSL 3 BASIC19.5■□□□□ 0.71
RXRGP48443 SIVA1-207ENST00000556195 674 ntTSL 3 BASIC19.5■□□□□ 0.71
RXRGP48443 ZNF561-AS1-202ENST00000586614 568 ntTSL 5 BASIC19.5■□□□□ 0.71
RXRGP48443 KCTD15-202ENST00000430256 2555 ntAPPRIS P1 TSL 2 BASIC19.5■□□□□ 0.71
RXRGP48443 DUSP15-201ENST00000278979 1732 ntTSL 2 BASIC19.5■□□□□ 0.71
RXRGP48443 FADS6-203ENST00000612771 2154 ntAPPRIS P2 TSL 1 (best) BASIC19.5■□□□□ 0.71
RXRGP48443 KRT8P17-201ENST00000453110 1448 ntBASIC19.5■□□□□ 0.71
RXRGP48443 NFYC-204ENST00000372653 1862 ntTSL 2 BASIC19.5■□□□□ 0.71
RXRGP48443 FGF7P6-201ENST00000377614 1890 ntTSL 1 (best) BASIC19.5■□□□□ 0.71
RXRGP48443 AC005224.2-201ENST00000571192 1885 ntTSL 2 BASIC19.5■□□□□ 0.71
RXRGP48443 BX664615.2-202ENST00000639056 1888 ntTSL 1 (best) BASIC19.5■□□□□ 0.71
RXRGP48443 MAPK9-208ENST00000455781 4336 ntAPPRIS ALT1 TSL 2 BASIC19.5■□□□□ 0.71
RXRGP48443 LAYN-204ENST00000525126 1763 ntTSL 5 BASIC19.49■□□□□ 0.71
RXRGP48443 BRD4-202ENST00000360016 3240 ntAPPRIS ALT2 TSL 1 (best) BASIC19.49■□□□□ 0.71
RXRGP48443 TRMU-202ENST00000381019 1381 ntTSL 1 (best) BASIC19.49■□□□□ 0.71
RXRGP48443 SOCS2-201ENST00000340600 2761 ntAPPRIS P1 TSL 1 (best) BASIC19.49■□□□□ 0.71
RXRGP48443 DYNLT3-203ENST00000432389 719 ntTSL 5 BASIC19.49■□□□□ 0.71
RXRGP48443 RNASEK-202ENST00000548577 810 ntTSL 1 (best) BASIC19.49■□□□□ 0.71
RXRGP48443 HLX-AS1-201ENST00000552026 563 ntTSL 4 BASIC19.49■□□□□ 0.71
RXRGP48443 GNB5-211ENST00000560116 918 ntTSL 1 (best) BASIC19.49■□□□□ 0.71
RXRGP48443 SMAD7-207ENST00000589634 1278 ntAPPRIS ALT1 TSL 4 BASIC19.49■□□□□ 0.71
RXRGP48443 FGF2-201ENST00000264498 6775 ntTSL 1 (best) BASIC19.49■□□□□ 0.71
RXRGP48443 ZDHHC18-202ENST00000374142 5020 ntAPPRIS P2 TSL 1 (best) BASIC19.49■□□□□ 0.71
RXRGP48443 KCNA3-201ENST00000369769 2569 ntAPPRIS P1 BASIC19.49■□□□□ 0.71
RXRGP48443 FBLN5-202ENST00000342058 2123 ntAPPRIS P1 TSL 1 (best) BASIC19.49■□□□□ 0.71
RXRGP48443 CYP2A6-201ENST00000301141 1764 ntAPPRIS P1 TSL 1 (best) BASIC19.49■□□□□ 0.71
RXRGP48443 KCNH2-201ENST00000262186 4286 ntAPPRIS P1 TSL 1 (best) BASIC19.49■□□□□ 0.71
RXRGP48443 ANKLE1-204ENST00000594072 2294 ntTSL 5 BASIC19.49■□□□□ 0.71
RXRGP48443 RGMA-210ENST00000557301 1929 ntAPPRIS ALT2 TSL 2 BASIC19.49■□□□□ 0.71
RXRGP48443 IL17RE-206ENST00000454190 2757 ntTSL 2 BASIC19.49■□□□□ 0.71
RXRGP48443 MARK1-205ENST00000611084 5321 ntAPPRIS ALT1 TSL 1 (best) BASIC19.49■□□□□ 0.71
RXRGP48443 NAGK-229ENST00000613852 1801 ntTSL 1 (best) BASIC19.48■□□□□ 0.71
RXRGP48443 BABAM1-208ENST00000598188 1470 ntAPPRIS P3 TSL 1 (best) BASIC19.48■□□□□ 0.71
RXRGP48443 SH2B1-202ENST00000337120 6043 ntAPPRIS P1 TSL 1 (best) BASIC19.48■□□□□ 0.71
RXRGP48443 CAPN1-226ENST00000533820 3083 ntAPPRIS P1 TSL 1 (best) BASIC19.48■□□□□ 0.71
RXRGP48443 PMPCB-202ENST00000428154 1714 ntTSL 1 (best) BASIC19.48■□□□□ 0.71
RXRGP48443 CDIPT-202ENST00000561555 1726 ntTSL 2 BASIC19.48■□□□□ 0.71
RXRGP48443 SYTL1-211ENST00000618673 1712 ntTSL 5 BASIC19.48■□□□□ 0.71
RXRGP48443 CALM3-202ENST00000391918 702 ntTSL 2 BASIC19.48■□□□□ 0.71
RXRGP48443 UBB-203ENST00000395839 1012 ntAPPRIS P1 TSL 2 BASIC19.48■□□□□ 0.71
RXRGP48443 RAMP1-204ENST00000409726 734 ntTSL 3 BASIC19.48■□□□□ 0.71
RXRGP48443 LINC00636-201ENST00000494231 1264 ntTSL 1 (best) BASIC19.48■□□□□ 0.71
RXRGP48443 ATP6V0E1-204ENST00000519911 718 ntTSL 2 BASIC19.48■□□□□ 0.71
RXRGP48443 AC117500.4-201ENST00000542797 617 ntTSL 3 BASIC19.48■□□□□ 0.71
RXRGP48443 RN7SL850P-201ENST00000579959 291 ntBASIC19.48■□□□□ 0.71
RXRGP48443 AC100793.2-201ENST00000593139 542 ntTSL 5 BASIC19.48■□□□□ 0.71
RXRGP48443 SMIM8-209ENST00000608868 815 ntAPPRIS P1 TSL 5 BASIC19.48■□□□□ 0.71
RXRGP48443 ANKRD54-211ENST00000609454 825 ntTSL 3 BASIC19.48■□□□□ 0.71
RXRGP48443 KANK3-205ENST00000610351 1191 ntTSL 5 BASIC19.48■□□□□ 0.71
RXRGP48443 MIR6786-201ENST00000616843 113 ntBASIC19.48■□□□□ 0.71
RXRGP48443 AC092865.7-201ENST00000641832 219 ntBASIC19.48■□□□□ 0.71
RXRGP48443 WISP2-201ENST00000190983 1403 ntAPPRIS P1 TSL 1 (best) BASIC19.48■□□□□ 0.71
RXRGP48443 GPRC5C-204ENST00000392629 1419 ntAPPRIS ALT2 TSL 1 (best) BASIC19.48■□□□□ 0.71
RXRGP48443 TMEM198-202ENST00000373883 2218 ntAPPRIS P1 TSL 1 (best) BASIC19.48■□□□□ 0.71
RXRGP48443 AP005212.1-201ENST00000581547 1997 ntBASIC19.48■□□□□ 0.71
RXRGP48443 MYH14-206ENST00000596571 5988 ntAPPRIS ALT2 TSL 5 BASIC19.48■□□□□ 0.71
RXRGP48443 RAB5A-201ENST00000273047 2536 ntAPPRIS P1 TSL 1 (best) BASIC19.48■□□□□ 0.71
RXRGP48443 PDLIM2-221ENST00000622702 1490 ntTSL 5 BASIC19.48■□□□□ 0.71
RXRGP48443 FAM129C-203ENST00000449408 2004 ntAPPRIS ALT2 TSL 2 BASIC19.47■□□□□ 0.71
RXRGP48443 ANKRD16-203ENST00000380094 2738 ntAPPRIS P1 TSL 2 BASIC19.47■□□□□ 0.71
RXRGP48443 PNMA8B-202ENST00000599531 5308 ntAPPRIS P1 BASIC19.47■□□□□ 0.71
RXRGP48443 PITX2-201ENST00000306732 2320 ntAPPRIS P4 TSL 1 (best) BASIC19.47■□□□□ 0.71
RXRGP48443 ADAMTS19-205ENST00000638972 5089 ntAPPRIS P1 TSL 1 (best) BASIC19.47■□□□□ 0.71
RXRGP48443 FAM3A-203ENST00000369641 1359 ntTSL 5 BASIC19.47■□□□□ 0.71
RXRGP48443 LTBP3-217ENST00000530785 2461 ntTSL 2 BASIC19.47■□□□□ 0.71
RXRGP48443 LARGE2-202ENST00000401752 2516 ntAPPRIS P3 TSL 1 (best) BASIC19.47■□□□□ 0.71
RXRGP48443 IFI6-201ENST00000339145 822 ntAPPRIS P4 TSL 2 BASIC19.47■□□□□ 0.71
RXRGP48443 ICAM4-201ENST00000340992 1176 ntAPPRIS ALT2 TSL 1 (best) BASIC19.47■□□□□ 0.71
RXRGP48443 SELENOF-203ENST00000401030 727 ntTSL 2 BASIC19.47■□□□□ 0.71
RXRGP48443 CACYBP-202ENST00000405362 1059 ntTSL 5 BASIC19.47■□□□□ 0.71
RXRGP48443 LINC01122-201ENST00000422723 675 ntTSL 3 BASIC19.47■□□□□ 0.71
RXRGP48443 AP000525.1-201ENST00000608286 694 ntBASIC19.47■□□□□ 0.71
RXRGP48443 CCDC28A-203ENST00000617445 1240 ntAPPRIS P1 TSL 1 (best) BASIC19.47■□□□□ 0.71
RXRGP48443 AC005363.2-201ENST00000618631 242 ntBASIC19.47■□□□□ 0.71
RXRGP48443 SPINK2-206ENST00000618802 608 ntTSL 3 BASIC19.47■□□□□ 0.71
RXRGP48443 CR392000.1-201ENST00000624770 1228 ntBASIC19.47■□□□□ 0.71
RXRGP48443 KRT16P1-201ENST00000399124 1418 ntBASIC19.47■□□□□ 0.71
RXRGP48443 AL161756.1-202ENST00000359491 1717 ntTSL 1 (best) BASIC19.47■□□□□ 0.71
RXRGP48443 TMEM163-201ENST00000281924 1892 ntAPPRIS P1 TSL 1 (best) BASIC19.47■□□□□ 0.71
RXRGP48443 AGER-207ENST00000375076 1492 ntAPPRIS P1 TSL 1 (best) BASIC19.47■□□□□ 0.71
RXRGP48443 MMP17-201ENST00000360564 2411 ntAPPRIS P2 TSL 1 (best) BASIC19.46■□□□□ 0.71
RXRGP48443 ERF-202ENST00000440177 2032 ntTSL 2 BASIC19.46■□□□□ 0.71
Retrieved 100 of 98,524 protein–RNA pairs in 40.4 ms