Protein–RNA interactions for Protein: P43003

SLC1A3, Excitatory amino acid transporter 1, humanhuman

Predictions only

Length 542 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SLC1A3P43003 NAT16-204ENST00000455377 1492 ntAPPRIS P2 TSL 1 (best) BASIC17.93■□□□□ 0.46
SLC1A3P43003 RIMBP3B-201ENST00000620804 6105 ntAPPRIS P1 BASIC17.93■□□□□ 0.46
SLC1A3P43003 PRAF2-202ENST00000553851 1334 ntAPPRIS P1 TSL 1 (best) BASIC17.93■□□□□ 0.46
SLC1A3P43003 INTS11-209ENST00000450926 1839 ntTSL 5 BASIC17.93■□□□□ 0.46
SLC1A3P43003 EARS2-206ENST00000563232 1709 ntTSL 1 (best) BASIC17.92■□□□□ 0.46
SLC1A3P43003 ADORA2A-214ENST00000611543 2412 ntAPPRIS P1 TSL 5 BASIC17.92■□□□□ 0.46
SLC1A3P43003 WT1-205ENST00000452863 2768 ntAPPRIS ALT2 TSL 1 (best) BASIC17.92■□□□□ 0.46
SLC1A3P43003 LPCAT3-201ENST00000261407 2268 ntAPPRIS P1 TSL 1 (best) BASIC17.92■□□□□ 0.46
SLC1A3P43003 RAB5C-202ENST00000393860 1912 ntAPPRIS P1 TSL 1 (best) BASIC17.92■□□□□ 0.46
SLC1A3P43003 THAP7-AS1-203ENST00000452284 2298 ntTSL 2 BASIC17.92■□□□□ 0.46
SLC1A3P43003 RPUSD2-202ENST00000559271 1558 ntAPPRIS ALT2 TSL 2 BASIC17.92■□□□□ 0.46
SLC1A3P43003 KLHL21-206ENST00000610898 1945 ntTSL 1 (best) BASIC17.92■□□□□ 0.46
SLC1A3P43003 FBLN7-202ENST00000331203 2301 ntAPPRIS P1 TSL 1 (best) BASIC17.92■□□□□ 0.46
SLC1A3P43003 FOXD4-201ENST00000382500 1974 ntAPPRIS P1 BASIC17.92■□□□□ 0.46
SLC1A3P43003 FHL1-219ENST00000618438 2178 ntTSL 3 BASIC17.92■□□□□ 0.46
SLC1A3P43003 MRAP-201ENST00000303645 935 ntAPPRIS P4 TSL 1 (best) BASIC17.92■□□□□ 0.46
SLC1A3P43003 SULT1A1-202ENST00000350842 1282 ntTSL 3 BASIC17.92■□□□□ 0.46
SLC1A3P43003 MRPS26-201ENST00000380325 1127 ntAPPRIS P1 TSL 1 (best) BASIC17.92■□□□□ 0.46
SLC1A3P43003 ZNF295-AS1-201ENST00000412906 952 ntTSL 1 (best) BASIC17.92■□□□□ 0.46
SLC1A3P43003 AC092849.2-201ENST00000492523 333 ntTSL 3 BASIC17.92■□□□□ 0.46
SLC1A3P43003 AC008667.2-201ENST00000504413 469 ntTSL 3 BASIC17.92■□□□□ 0.46
SLC1A3P43003 SEC23A-AS1-201ENST00000557350 500 ntTSL 3 BASIC17.92■□□□□ 0.46
SLC1A3P43003 AC113189.1-201ENST00000570444 327 ntTSL 3 BASIC17.92■□□□□ 0.46
SLC1A3P43003 SEPT2-203ENST00000391971 3315 ntAPPRIS P1 TSL 1 (best) BASIC17.92■□□□□ 0.46
SLC1A3P43003 SLC35B1-201ENST00000240333 1850 ntAPPRIS P1 TSL 1 (best) BASIC17.92■□□□□ 0.46
SLC1A3P43003 CCM2-202ENST00000381112 1881 ntAPPRIS ALT2 TSL 2 BASIC17.92■□□□□ 0.46
SLC1A3P43003 MRPL23-AS1-201ENST00000419080 1876 ntTSL 3 BASIC17.92■□□□□ 0.46
SLC1A3P43003 KATNAL2-208ENST00000592005 1348 ntTSL 1 (best) BASIC17.92■□□□□ 0.46
SLC1A3P43003 LSR-214ENST00000621372 2274 ntAPPRIS P4 TSL 1 (best) BASIC17.92■□□□□ 0.46
SLC1A3P43003 BSCL2-207ENST00000407022 1516 ntAPPRIS P3 TSL 1 (best) BASIC17.92■□□□□ 0.46
SLC1A3P43003 TMEM91-203ENST00000392002 1389 ntAPPRIS P1 TSL 2 BASIC17.91■□□□□ 0.46
SLC1A3P43003 HOXB2-201ENST00000330070 1562 ntAPPRIS P1 TSL 1 (best) BASIC17.91■□□□□ 0.46
SLC1A3P43003 RAB34-203ENST00000395243 1597 ntTSL 1 (best) BASIC17.91■□□□□ 0.46
SLC1A3P43003 TBX6-201ENST00000279386 1796 ntAPPRIS P1 TSL 1 (best) BASIC17.91■□□□□ 0.46
SLC1A3P43003 TBX6-205ENST00000627355 1796 ntTSL 5 BASIC17.91■□□□□ 0.46
SLC1A3P43003 SREBF2-209ENST00000612482 5365 ntTSL 5 BASIC17.91■□□□□ 0.46
SLC1A3P43003 CD2AP-201ENST00000359314 5412 ntAPPRIS P1 TSL 1 (best) BASIC17.91■□□□□ 0.46
SLC1A3P43003 PCBP3-206ENST00000400314 2202 ntAPPRIS P2 TSL 5 BASIC17.91■□□□□ 0.46
SLC1A3P43003 DBNL-207ENST00000440166 1415 ntTSL 2 BASIC17.91■□□□□ 0.46
SLC1A3P43003 FAM160A2-201ENST00000265978 3481 ntAPPRIS P3 TSL 1 (best) BASIC17.91■□□□□ 0.46
SLC1A3P43003 CADPS-201ENST00000283269 4591 ntAPPRIS P4 TSL 1 (best) BASIC17.91■□□□□ 0.46
SLC1A3P43003 CAMKV-205ENST00000467248 1688 ntTSL 2 BASIC17.91■□□□□ 0.46
SLC1A3P43003 CYB561-204ENST00000448884 1496 ntTSL 2 BASIC17.91■□□□□ 0.46
SLC1A3P43003 SDHC-201ENST00000342751 1127 ntTSL 1 (best) BASIC17.91■□□□□ 0.46
SLC1A3P43003 DGCR6L-202ENST00000405465 962 ntTSL 3 BASIC17.91■□□□□ 0.46
SLC1A3P43003 STPG4-207ENST00000445927 891 ntAPPRIS P1 TSL 5 BASIC17.91■□□□□ 0.46
SLC1A3P43003 TNIK-208ENST00000465393 750 ntTSL 1 (best) BASIC17.91■□□□□ 0.46
SLC1A3P43003 SOX15-202ENST00000538513 1050 ntAPPRIS P1 TSL 1 (best) BASIC17.91■□□□□ 0.46
SLC1A3P43003 KLF13-207ENST00000560473 489 ntTSL 3 BASIC17.91■□□□□ 0.46
SLC1A3P43003 SOX15-203ENST00000570788 1093 ntBASIC17.91■□□□□ 0.46
SLC1A3P43003 TIMM50-213ENST00000599794 786 ntTSL 2 BASIC17.91■□□□□ 0.46
SLC1A3P43003 AC120498.8-201ENST00000614275 531 ntBASIC17.91■□□□□ 0.46
SLC1A3P43003 HSD17B12-213ENST00000637401 866 ntTSL 4 BASIC17.91■□□□□ 0.46
SLC1A3P43003 MARK1-205ENST00000611084 5321 ntAPPRIS ALT1 TSL 1 (best) BASIC17.91■□□□□ 0.46
SLC1A3P43003 SMARCD1-201ENST00000381513 3237 ntTSL 1 (best) BASIC17.91■□□□□ 0.46
SLC1A3P43003 CYGB-201ENST00000293230 2158 ntAPPRIS P1 TSL 1 (best) BASIC17.91■□□□□ 0.46
SLC1A3P43003 REEP2-202ENST00000378339 2170 ntAPPRIS ALT1 TSL 1 (best) BASIC17.91■□□□□ 0.46
SLC1A3P43003 PGAP1-204ENST00000409475 2443 ntTSL 2 BASIC17.91■□□□□ 0.46
SLC1A3P43003 ZNF346-209ENST00000512315 1575 ntTSL 2 BASIC17.91■□□□□ 0.46
SLC1A3P43003 RELB-207ENST00000625761 2279 ntAPPRIS ALT2 TSL 5 BASIC17.91■□□□□ 0.46
SLC1A3P43003 PUF60-202ENST00000349157 1821 ntAPPRIS ALT2 TSL 1 (best) BASIC17.91■□□□□ 0.46
SLC1A3P43003 AC124283.5-201ENST00000624661 1809 ntBASIC17.91■□□□□ 0.46
SLC1A3P43003 PRMT2-206ENST00000397638 2131 ntAPPRIS P1 TSL 1 (best) BASIC17.9■□□□□ 0.46
SLC1A3P43003 PIGQ-209ENST00000470411 2112 ntTSL 1 (best) BASIC17.9■□□□□ 0.46
SLC1A3P43003 ANKRD13D-216ENST00000514166 2138 ntTSL 2 BASIC17.9■□□□□ 0.46
SLC1A3P43003 KCNK4-201ENST00000394525 1673 ntAPPRIS P1 TSL 1 (best) BASIC17.9■□□□□ 0.46
SLC1A3P43003 STX17-212ENST00000534052 2424 ntAPPRIS P1 TSL 1 (best) BASIC17.9■□□□□ 0.46
SLC1A3P43003 ACSS3-201ENST00000261206 2666 ntAPPRIS ALT1 TSL 1 (best) BASIC17.9■□□□□ 0.46
SLC1A3P43003 PAFAH1B2-202ENST00000419197 2517 ntTSL 2 BASIC17.9■□□□□ 0.46
SLC1A3P43003 C10orf76-201ENST00000311122 724 ntTSL 1 (best) BASIC17.9■□□□□ 0.46
SLC1A3P43003 APTR-205ENST00000447009 902 ntTSL 2 BASIC17.9■□□□□ 0.46
SLC1A3P43003 AC009065.4-203ENST00000562838 535 ntTSL 2 BASIC17.9■□□□□ 0.46
SLC1A3P43003 DCAKD-205ENST00000588499 990 ntAPPRIS P1 TSL 2 BASIC17.9■□□□□ 0.46
SLC1A3P43003 NAT14-204ENST00000591590 1011 ntTSL 1 (best) BASIC17.9■□□□□ 0.46
SLC1A3P43003 ANAPC11-223ENST00000612413 964 ntTSL 3 BASIC17.9■□□□□ 0.46
SLC1A3P43003 LDHD-201ENST00000300051 2067 ntAPPRIS P3 TSL 1 (best) BASIC17.9■□□□□ 0.46
SLC1A3P43003 AC138356.1-201ENST00000330539 2086 ntTSL 2 BASIC17.9■□□□□ 0.46
SLC1A3P43003 IP6K1-204ENST00000468463 1815 ntTSL 5 BASIC17.9■□□□□ 0.46
SLC1A3P43003 TMEM218-213ENST00000531909 1828 ntAPPRIS P1 TSL 1 (best) BASIC17.9■□□□□ 0.46
SLC1A3P43003 ATP6V0A2-201ENST00000330342 6542 ntAPPRIS P1 TSL 1 (best) BASIC17.9■□□□□ 0.46
SLC1A3P43003 VAV1-210ENST00000602142 2620 ntAPPRIS P1 TSL 1 (best) BASIC17.9■□□□□ 0.46
SLC1A3P43003 WIPF2-202ENST00000394103 2378 ntAPPRIS ALT2 TSL 5 BASIC17.9■□□□□ 0.46
SLC1A3P43003 AGFG2-201ENST00000300176 4796 ntAPPRIS P1 TSL 1 (best) BASIC17.9■□□□□ 0.46
SLC1A3P43003 KIF26A-202ENST00000423312 5649 ntAPPRIS P2 TSL 5 BASIC17.9■□□□□ 0.46
SLC1A3P43003 P2RY6-212ENST00000618468 2431 ntAPPRIS P1 TSL 3 BASIC17.9■□□□□ 0.46
SLC1A3P43003 FLT1-207ENST00000615840 6453 ntTSL 1 (best) BASIC17.9■□□□□ 0.46
SLC1A3P43003 GALNT16-204ENST00000553669 1629 ntTSL 1 (best) BASIC17.9■□□□□ 0.46
SLC1A3P43003 TCAIM-203ENST00000396078 2178 ntTSL 1 (best) BASIC17.9■□□□□ 0.46
SLC1A3P43003 HTRA3-201ENST00000307358 2541 ntAPPRIS P1 TSL 1 (best) BASIC17.9■□□□□ 0.46
SLC1A3P43003 FBXO24-201ENST00000241071 2276 ntAPPRIS P1 TSL 1 (best) BASIC17.89■□□□□ 0.46
SLC1A3P43003 ARHGAP28-203ENST00000383472 2295 ntAPPRIS ALT2 TSL 5 BASIC17.89■□□□□ 0.46
SLC1A3P43003 PWWP2AP1-201ENST00000429776 2273 ntBASIC17.89■□□□□ 0.46
SLC1A3P43003 AC007383.3-201ENST00000453039 1411 ntTSL 3 BASIC17.89■□□□□ 0.46
SLC1A3P43003 FAM110D-201ENST00000374268 2858 ntAPPRIS P1 TSL 1 (best) BASIC17.89■□□□□ 0.46
SLC1A3P43003 ZNF771-202ENST00000434417 1454 ntAPPRIS P1 TSL 2 BASIC17.89■□□□□ 0.45
SLC1A3P43003 GRB10-201ENST00000335866 5032 ntTSL 1 (best) BASIC17.89■□□□□ 0.45
SLC1A3P43003 LSM11-201ENST00000286307 6584 ntAPPRIS P1 TSL 1 (best) BASIC17.89■□□□□ 0.45
SLC1A3P43003 PPM1L-204ENST00000497343 1589 ntTSL 2 BASIC17.89■□□□□ 0.45
SLC1A3P43003 THAP7-201ENST00000215742 1213 ntAPPRIS P1 TSL 1 (best) BASIC17.89■□□□□ 0.45
SLC1A3P43003 AC068473.1-201ENST00000317008 1111 ntTSL 2 BASIC17.89■□□□□ 0.45
Retrieved 100 of 98,524 protein–RNA pairs in 18.4 ms