Protein–RNA interactions for Protein: P35398

RORA, Nuclear receptor ROR-alpha, humanhuman

Predictions only

Length 523 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RORAP35398 MIXL1-202ENST00000542034 839 ntTSL 1 (best) BASIC18.54■□□□□ 0.56
RORAP35398 FAM181A-203ENST00000556222 1162 ntAPPRIS P1 TSL 1 (best) BASIC18.54■□□□□ 0.56
RORAP35398 AC100839.1-201ENST00000559589 577 ntTSL 4 BASIC18.54■□□□□ 0.56
RORAP35398 AC026271.3-201ENST00000571884 352 ntBASIC18.54■□□□□ 0.56
RORAP35398 AL158152.2-201ENST00000602703 235 ntTSL 3 BASIC18.54■□□□□ 0.56
RORAP35398 CROCCP4-202ENST00000633627 573 ntTSL 3 BASIC18.54■□□□□ 0.56
RORAP35398 AL031985.4-201ENST00000642138 673 ntBASIC18.54■□□□□ 0.56
RORAP35398 RNF224-201ENST00000445101 1798 ntAPPRIS P1 TSL 3 BASIC18.54■□□□□ 0.56
RORAP35398 LINC01123-202ENST00000419296 2436 ntTSL 2 BASIC18.54■□□□□ 0.56
RORAP35398 EED-201ENST00000263360 2223 ntAPPRIS P1 TSL 1 (best) BASIC18.54■□□□□ 0.56
RORAP35398 SORCS2-203ENST00000507866 6152 ntAPPRIS P2 TSL 1 (best) BASIC18.54■□□□□ 0.56
RORAP35398 WNT10A-201ENST00000258411 2547 ntAPPRIS P1 TSL 1 (best) BASIC18.54■□□□□ 0.56
RORAP35398 NEU4-202ENST00000391969 2526 ntAPPRIS P1 TSL 2 BASIC18.54■□□□□ 0.56
RORAP35398 PMS1-222ENST00000639501 2506 ntTSL 5 BASIC18.54■□□□□ 0.56
RORAP35398 TPSB2-203ENST00000612142 1352 ntAPPRIS P5 TSL 1 (best) BASIC18.54■□□□□ 0.56
RORAP35398 ALKBH6-213ENST00000486389 1525 ntTSL 3 BASIC18.54■□□□□ 0.56
RORAP35398 NSUN2-206ENST00000506139 2619 ntAPPRIS ALT2 TSL 2 BASIC18.53■□□□□ 0.56
RORAP35398 PLCD1-201ENST00000334661 2769 ntAPPRIS P3 TSL 1 (best) BASIC18.53■□□□□ 0.56
RORAP35398 LSM11-201ENST00000286307 6584 ntAPPRIS P1 TSL 1 (best) BASIC18.53■□□□□ 0.56
RORAP35398 TRPV6-209ENST00000638686 2298 ntAPPRIS P2 TSL 1 (best) BASIC18.53■□□□□ 0.56
RORAP35398 REM2-201ENST00000267396 1923 ntAPPRIS P1 TSL 1 (best) BASIC18.53■□□□□ 0.56
RORAP35398 BRICD5-201ENST00000328540 1913 ntAPPRIS P1 TSL 1 (best) BASIC18.53■□□□□ 0.56
RORAP35398 SLC44A3-203ENST00000446120 2094 ntTSL 2 BASIC18.53■□□□□ 0.56
RORAP35398 PPTC7-201ENST00000354300 4996 ntAPPRIS P1 TSL 1 (best) BASIC18.53■□□□□ 0.56
RORAP35398 GUCY1A3-210ENST00000513574 2656 ntAPPRIS P1 TSL 1 (best) BASIC18.53■□□□□ 0.56
RORAP35398 PSMD6-201ENST00000295901 1430 ntAPPRIS P1 TSL 1 (best) BASIC18.53■□□□□ 0.56
RORAP35398 SMTN-204ENST00000404574 1735 ntTSL 2 BASIC18.53■□□□□ 0.56
RORAP35398 AOC1-202ENST00000416793 2453 ntTSL 1 (best) BASIC18.53■□□□□ 0.56
RORAP35398 CEBPA-201ENST00000498907 2631 ntAPPRIS P1 BASIC18.53■□□□□ 0.56
RORAP35398 TGIF1-222ENST00000577543 729 ntTSL 3 BASIC18.53■□□□□ 0.56
RORAP35398 ABBA01031674.1-201ENST00000635145 728 ntBASIC18.53■□□□□ 0.56
RORAP35398 GLDC-219ENST00000640208 420 ntTSL 2 BASIC18.53■□□□□ 0.56
RORAP35398 RPS6KL1-216ENST00000557413 2425 ntAPPRIS P1 TSL 5 BASIC18.53■□□□□ 0.56
RORAP35398 PRMT5-201ENST00000216350 2271 ntTSL 2 BASIC18.53■□□□□ 0.56
RORAP35398 ACBD4-203ENST00000398322 1986 ntAPPRIS P1 TSL 1 (best) BASIC18.53■□□□□ 0.56
RORAP35398 GLT8D1-206ENST00000478968 1826 ntAPPRIS P1 TSL 1 (best) BASIC18.53■□□□□ 0.56
RORAP35398 BRSK2-208ENST00000528841 3586 ntAPPRIS ALT2 TSL 1 (best) BASIC18.53■□□□□ 0.56
RORAP35398 PPM1D-204ENST00000629650 1525 ntTSL 5 BASIC18.53■□□□□ 0.56
RORAP35398 GTF3A-201ENST00000381140 1383 ntAPPRIS ALT2 TSL 1 (best) BASIC18.53■□□□□ 0.56
RORAP35398 SPHK1-203ENST00000545180 2238 ntAPPRIS P3 TSL 2 BASIC18.53■□□□□ 0.56
RORAP35398 TDRP-202ENST00000427263 2465 ntTSL 1 (best) BASIC18.52■□□□□ 0.56
RORAP35398 CRB2-202ENST00000373631 5550 ntAPPRIS P1 TSL 1 (best) BASIC18.52■□□□□ 0.56
RORAP35398 PRRT4-207ENST00000535159 2897 ntAPPRIS P1 TSL 5 BASIC18.52■□□□□ 0.56
RORAP35398 HSPA8-202ENST00000453788 2004 ntTSL 1 (best) BASIC18.52■□□□□ 0.56
RORAP35398 IDH1-205ENST00000446179 2298 ntAPPRIS P1 TSL 1 (best) BASIC18.52■□□□□ 0.56
RORAP35398 MAP4K4-210ENST00000425019 4403 ntTSL 5 BASIC18.52■□□□□ 0.56
RORAP35398 SLC35E2-201ENST00000246421 1430 ntAPPRIS P3 TSL 1 (best) BASIC18.52■□□□□ 0.56
RORAP35398 KRT8P9-201ENST00000558927 1449 ntBASIC18.52■□□□□ 0.56
RORAP35398 SLX1A-201ENST00000251303 1091 ntAPPRIS P4 TSL 1 (best) BASIC18.52■□□□□ 0.56
RORAP35398 SLX1B-201ENST00000330181 1165 ntAPPRIS P4 TSL 1 (best) BASIC18.52■□□□□ 0.56
RORAP35398 MESTP1-201ENST00000404287 994 ntBASIC18.52■□□□□ 0.56
RORAP35398 AC009487.1-202ENST00000437683 402 ntTSL 2 BASIC18.52■□□□□ 0.56
RORAP35398 LINC01184-202ENST00000501173 949 ntTSL 5 BASIC18.52■□□□□ 0.56
RORAP35398 AC090970.2-201ENST00000561318 865 ntTSL 5 BASIC18.52■□□□□ 0.56
RORAP35398 SPINK2-206ENST00000618802 608 ntTSL 3 BASIC18.52■□□□□ 0.56
RORAP35398 AC097662.2-201ENST00000641359 267 ntAPPRIS P1 BASIC18.52■□□□□ 0.56
RORAP35398 ESR2-204ENST00000353772 2454 ntTSL 1 (best) BASIC18.52■□□□□ 0.56
RORAP35398 B4GALT1-202ENST00000535206 1535 ntTSL 1 (best) BASIC18.52■□□□□ 0.56
RORAP35398 BCL7A-201ENST00000261822 2581 ntAPPRIS P1 TSL 1 (best) BASIC18.52■□□□□ 0.56
RORAP35398 ZNF280B-203ENST00000626650 5721 ntAPPRIS P1 TSL 2 BASIC18.52■□□□□ 0.55
RORAP35398 FEZF1-202ENST00000427185 1368 ntTSL 1 (best) BASIC18.52■□□□□ 0.55
RORAP35398 LINC00482-201ENST00000332012 2023 ntTSL 1 (best) BASIC18.52■□□□□ 0.55
RORAP35398 UBAP1-204ENST00000625521 2029 ntTSL 2 BASIC18.52■□□□□ 0.55
RORAP35398 STX6-204ENST00000542060 4809 ntTSL 2 BASIC18.52■□□□□ 0.55
RORAP35398 GALNT13-201ENST00000392825 5536 ntAPPRIS P1 TSL 2 BASIC18.51■□□□□ 0.55
RORAP35398 PSKH2-201ENST00000276616 1322 ntAPPRIS P1 TSL 1 (best) BASIC18.51■□□□□ 0.55
RORAP35398 TRABD2A-201ENST00000335459 1844 ntTSL 1 (best) BASIC18.51■□□□□ 0.55
RORAP35398 HYLS1-203ENST00000526028 1803 ntAPPRIS P1 TSL 5 BASIC18.51■□□□□ 0.55
RORAP35398 NCLN-205ENST00000590671 2070 ntTSL 2 BASIC18.51■□□□□ 0.55
RORAP35398 FAM131C-201ENST00000375662 1695 ntAPPRIS P1 TSL 1 (best) BASIC18.51■□□□□ 0.55
RORAP35398 AUP1-201ENST00000377526 1695 ntAPPRIS P1 TSL 1 (best) BASIC18.51■□□□□ 0.55
RORAP35398 AIRN-201ENST00000601203 4374 ntBASIC18.51■□□□□ 0.55
RORAP35398 TXNRD2-202ENST00000400518 2025 ntAPPRIS ALT2 TSL 1 (best) BASIC18.51■□□□□ 0.55
RORAP35398 COCH-201ENST00000216361 2397 ntAPPRIS P1 TSL 1 (best) BASIC18.51■□□□□ 0.55
RORAP35398 VCY1B-201ENST00000250823 550 ntAPPRIS P1 TSL 1 (best) BASIC18.51■□□□□ 0.55
RORAP35398 VCY-201ENST00000250825 550 ntAPPRIS P1 TSL 1 (best) BASIC18.51■□□□□ 0.55
RORAP35398 NSMF-201ENST00000265663 2981 ntAPPRIS P3 TSL 1 (best) BASIC18.51■□□□□ 0.55
RORAP35398 ANK1-206ENST00000348036 622 ntTSL 1 (best) BASIC18.51■□□□□ 0.55
RORAP35398 NSMF-206ENST00000371475 2987 ntAPPRIS ALT1 TSL 1 (best) BASIC18.51■□□□□ 0.55
RORAP35398 MIR1238-201ENST00000408483 83 ntBASIC18.51■□□□□ 0.55
RORAP35398 AC004980.1-204ENST00000429707 299 ntBASIC18.51■□□□□ 0.55
RORAP35398 LRRC75A-AS1-205ENST00000475953 1201 ntTSL 1 (best) BASIC18.51■□□□□ 0.55
RORAP35398 NEURL1B-202ENST00000520919 1089 ntTSL 1 (best) BASIC18.51■□□□□ 0.55
RORAP35398 FITM1-202ENST00000559294 800 ntBASIC18.51■□□□□ 0.55
RORAP35398 GCHFR-205ENST00000559932 695 ntTSL 2 BASIC18.51■□□□□ 0.55
RORAP35398 AC018521.5-202ENST00000577279 374 ntTSL 3 BASIC18.51■□□□□ 0.55
RORAP35398 AC018521.5-201ENST00000582787 496 ntTSL 2 BASIC18.51■□□□□ 0.55
RORAP35398 TMEM44-204ENST00000392432 2490 ntTSL 1 (best) BASIC18.51■□□□□ 0.55
RORAP35398 ZNF852-201ENST00000436261 1968 ntAPPRIS P1 TSL 2 BASIC18.51■□□□□ 0.55
RORAP35398 LPAR2-203ENST00000586703 1823 ntAPPRIS P1 TSL 1 (best) BASIC18.51■□□□□ 0.55
RORAP35398 UNKL-205ENST00000397464 2180 ntTSL 2 BASIC18.51■□□□□ 0.55
RORAP35398 ARFGAP3-201ENST00000263245 2857 ntAPPRIS P1 TSL 1 (best) BASIC18.51■□□□□ 0.55
RORAP35398 ADAP1-218ENST00000617043 1946 ntTSL 2 BASIC18.51■□□□□ 0.55
RORAP35398 AP001271.2-201ENST00000624018 1556 ntBASIC18.51■□□□□ 0.55
RORAP35398 PRKG2-207ENST00000628926 2623 ntTSL 2 BASIC18.51■□□□□ 0.55
RORAP35398 E4F1-204ENST00000564139 2493 ntTSL 1 (best) BASIC18.5■□□□□ 0.55
RORAP35398 APBB3-203ENST00000357560 2218 ntAPPRIS P3 TSL 5 BASIC18.5■□□□□ 0.55
RORAP35398 TMEM234-203ENST00000373593 1411 ntTSL 1 (best) BASIC18.5■□□□□ 0.55
RORAP35398 LINC01547-202ENST00000397841 2303 ntTSL 2 BASIC18.5■□□□□ 0.55
RORAP35398 DPP10-203ENST00000393147 2758 ntAPPRIS ALT2 TSL 1 (best) BASIC18.5■□□□□ 0.55
Retrieved 100 of 98,524 protein–RNA pairs in 47 ms