Protein–RNA interactions for Protein: P0C0E4

RAB40AL, Ras-related protein Rab-40A-like, humanhuman

Predictions only

Length 278 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RAB40ALP0C0E4 CACNA1A-257ENST00000638009 8665 ntAPPRIS ALT2 TSL 1 (best) BASIC18.4■□□□□ 0.54
RAB40ALP0C0E4 STARD10-201ENST00000334805 1963 ntAPPRIS P1 TSL 1 (best) BASIC18.4■□□□□ 0.54
RAB40ALP0C0E4 PEX6-201ENST00000244546 2696 ntTSL 1 (best) BASIC18.4■□□□□ 0.54
RAB40ALP0C0E4 DIAPH1-203ENST00000389057 5762 ntAPPRIS ALT2 TSL 5 BASIC18.4■□□□□ 0.54
RAB40ALP0C0E4 RPUSD1-202ENST00000561734 2159 ntAPPRIS P1 TSL 1 (best) BASIC18.4■□□□□ 0.54
RAB40ALP0C0E4 CLN8-208ENST00000635751 1807 ntAPPRIS P1 TSL 5 BASIC18.39■□□□□ 0.54
RAB40ALP0C0E4 MAP2K2-202ENST00000394867 1471 ntTSL 5 BASIC18.39■□□□□ 0.54
RAB40ALP0C0E4 RTP5-201ENST00000343216 2296 ntAPPRIS P1 TSL 1 (best) BASIC18.39■□□□□ 0.54
RAB40ALP0C0E4 RGS3-232ENST00000620489 1503 ntTSL 1 (best) BASIC18.39■□□□□ 0.54
RAB40ALP0C0E4 SNUPN-205ENST00000564644 1931 ntAPPRIS P1 TSL 2 BASIC18.39■□□□□ 0.53
RAB40ALP0C0E4 IZUMO2-201ENST00000293405 728 ntAPPRIS P2 TSL 1 (best) BASIC18.39■□□□□ 0.53
RAB40ALP0C0E4 DGCR6-201ENST00000331444 1214 ntAPPRIS P1 TSL 1 (best) BASIC18.39■□□□□ 0.53
RAB40ALP0C0E4 C9orf129-201ENST00000375419 1154 ntAPPRIS P1 TSL 5 BASIC18.39■□□□□ 0.53
RAB40ALP0C0E4 CRAT-202ENST00000393384 973 ntTSL 2 BASIC18.39■□□□□ 0.53
RAB40ALP0C0E4 AL390955.1-201ENST00000428694 934 ntBASIC18.39■□□□□ 0.53
RAB40ALP0C0E4 ZNF534-203ENST00000432303 956 ntTSL 2 BASIC18.39■□□□□ 0.53
RAB40ALP0C0E4 FBXO32-202ENST00000443022 1227 ntTSL 1 (best) BASIC18.39■□□□□ 0.53
RAB40ALP0C0E4 UNC5B-AS1-201ENST00000447119 647 ntTSL 2 BASIC18.39■□□□□ 0.53
RAB40ALP0C0E4 AC098829.1-201ENST00000502344 630 ntTSL 3 BASIC18.39■□□□□ 0.53
RAB40ALP0C0E4 TARBP2-220ENST00000552857 916 ntTSL 5 BASIC18.39■□□□□ 0.53
RAB40ALP0C0E4 P4HB-223ENST00000576390 439 ntTSL 4 BASIC18.39■□□□□ 0.53
RAB40ALP0C0E4 DEDD2-209ENST00000598727 1037 ntTSL 1 (best) BASIC18.39■□□□□ 0.53
RAB40ALP0C0E4 AC010947.1-201ENST00000623454 693 ntBASIC18.39■□□□□ 0.53
RAB40ALP0C0E4 AC008735.6-201ENST00000635964 1292 ntAPPRIS P1 TSL 2 BASIC18.39■□□□□ 0.53
RAB40ALP0C0E4 NRG2-204ENST00000358522 2559 ntAPPRIS P5 TSL 1 (best) BASIC18.39■□□□□ 0.53
RAB40ALP0C0E4 CBWD3-201ENST00000360171 2165 ntAPPRIS P2 TSL 1 (best) BASIC18.39■□□□□ 0.53
RAB40ALP0C0E4 CENPH-206ENST00000515001 1305 ntTSL 2 BASIC18.39■□□□□ 0.53
RAB40ALP0C0E4 CDX1-202ENST00000616154 1343 ntTSL 1 (best) BASIC18.39■□□□□ 0.53
RAB40ALP0C0E4 BRSK2-215ENST00000544817 1842 ntTSL 1 (best) BASIC18.39■□□□□ 0.53
RAB40ALP0C0E4 CECR2-202ENST00000342247 6178 ntAPPRIS ALT2 TSL 5 BASIC18.39■□□□□ 0.53
RAB40ALP0C0E4 NSDHL-201ENST00000370274 1929 ntAPPRIS P2 TSL 1 (best) BASIC18.39■□□□□ 0.53
RAB40ALP0C0E4 CYP2D8P-201ENST00000433633 1490 ntBASIC18.39■□□□□ 0.53
RAB40ALP0C0E4 IRF7-201ENST00000330243 1992 ntAPPRIS P4 TSL 5 BASIC18.39■□□□□ 0.53
RAB40ALP0C0E4 HOXD11-201ENST00000249504 1533 ntAPPRIS P1 TSL 3 BASIC18.39■□□□□ 0.53
RAB40ALP0C0E4 GLT8D1-213ENST00000491606 1577 ntAPPRIS P1 TSL 5 BASIC18.38■□□□□ 0.53
RAB40ALP0C0E4 NEURL4-203ENST00000570460 4890 ntAPPRIS ALT2 TSL 5 BASIC18.38■□□□□ 0.53
RAB40ALP0C0E4 SMYD2-201ENST00000366957 1671 ntAPPRIS P1 TSL 1 (best) BASIC18.38■□□□□ 0.53
RAB40ALP0C0E4 CD37-204ENST00000535669 1674 ntTSL 2 BASIC18.38■□□□□ 0.53
RAB40ALP0C0E4 IL11RA-201ENST00000318041 1728 ntAPPRIS P1 TSL 1 (best) BASIC18.38■□□□□ 0.53
RAB40ALP0C0E4 ARMC9-201ENST00000349938 2300 ntAPPRIS P1 TSL 1 (best) BASIC18.38■□□□□ 0.53
RAB40ALP0C0E4 KRT83-201ENST00000293670 1875 ntAPPRIS P1 TSL 1 (best) BASIC18.38■□□□□ 0.53
RAB40ALP0C0E4 NR6A1-202ENST00000373584 1890 ntAPPRIS ALT2 TSL 1 (best) BASIC18.38■□□□□ 0.53
RAB40ALP0C0E4 ING1-202ENST00000338450 1189 ntTSL 1 (best) BASIC18.38■□□□□ 0.53
RAB40ALP0C0E4 AL731557.1-201ENST00000425264 744 ntTSL 3 BASIC18.38■□□□□ 0.53
RAB40ALP0C0E4 FAM86C1-203ENST00000426628 952 ntAPPRIS ALT2 TSL 2 BASIC18.38■□□□□ 0.53
RAB40ALP0C0E4 AL031600.3-201ENST00000566287 1124 ntTSL 5 BASIC18.38■□□□□ 0.53
RAB40ALP0C0E4 AC126696.3-202ENST00000570159 553 ntTSL 5 BASIC18.38■□□□□ 0.53
RAB40ALP0C0E4 CIRBP-217ENST00000588230 1013 ntTSL 5 BASIC18.38■□□□□ 0.53
RAB40ALP0C0E4 ADRA1B-201ENST00000306675 2047 ntAPPRIS P1 TSL 1 (best) BASIC18.38■□□□□ 0.53
RAB40ALP0C0E4 PKM-215ENST00000565154 2004 ntAPPRIS ALT1 TSL 2 BASIC18.38■□□□□ 0.53
RAB40ALP0C0E4 IGFBP7-AS1-201ENST00000499667 1389 ntTSL 1 (best) BASIC18.38■□□□□ 0.53
RAB40ALP0C0E4 SMG8-203ENST00000578922 2178 ntBASIC18.38■□□□□ 0.53
RAB40ALP0C0E4 BX119927.1-201ENST00000636596 1552 ntBASIC18.38■□□□□ 0.53
RAB40ALP0C0E4 ALDOA-221ENST00000566897 2448 ntAPPRIS P2 TSL 2 BASIC18.38■□□□□ 0.53
RAB40ALP0C0E4 INTS11-202ENST00000411962 1832 ntTSL 5 BASIC18.37■□□□□ 0.53
RAB40ALP0C0E4 RDX-202ENST00000405097 2761 ntTSL 1 (best) BASIC18.37■□□□□ 0.53
RAB40ALP0C0E4 ADM-206ENST00000528655 1889 ntAPPRIS P1 TSL 1 (best) BASIC18.37■□□□□ 0.53
RAB40ALP0C0E4 NAP1L4-212ENST00000526115 1941 ntTSL 2 BASIC18.37■□□□□ 0.53
RAB40ALP0C0E4 HDAC2-201ENST00000368632 2084 ntTSL 2 BASIC18.37■□□□□ 0.53
RAB40ALP0C0E4 PCSK6-214ENST00000611716 4409 ntAPPRIS P4 TSL 1 (best) BASIC18.37■□□□□ 0.53
RAB40ALP0C0E4 DET1-201ENST00000268148 2267 ntAPPRIS P1 TSL 1 (best) BASIC18.37■□□□□ 0.53
RAB40ALP0C0E4 NUDT11-201ENST00000375992 2385 ntAPPRIS P1 TSL 1 (best) BASIC18.37■□□□□ 0.53
RAB40ALP0C0E4 SYNE4-202ENST00000340477 1004 ntAPPRIS ALT2 TSL 1 (best) BASIC18.37■□□□□ 0.53
RAB40ALP0C0E4 LCN8-201ENST00000371688 867 ntAPPRIS P2 TSL 1 (best) BASIC18.37■□□□□ 0.53
RAB40ALP0C0E4 CCDC74B-204ENST00000409234 871 ntAPPRIS ALT2 TSL 1 (best) BASIC18.37■□□□□ 0.53
RAB40ALP0C0E4 CHAC1-203ENST00000487220 853 ntTSL 3 BASIC18.37■□□□□ 0.53
RAB40ALP0C0E4 RN7SL850P-201ENST00000579959 291 ntBASIC18.37■□□□□ 0.53
RAB40ALP0C0E4 ARHGDIA-207ENST00000580685 1201 ntAPPRIS P1 TSL 1 (best) BASIC18.37■□□□□ 0.53
RAB40ALP0C0E4 AC008649.1-201ENST00000589557 516 ntTSL 2 BASIC18.37■□□□□ 0.53
RAB40ALP0C0E4 NRXN2-201ENST00000265459 6621 ntAPPRIS P3 TSL 5 BASIC18.37■□□□□ 0.53
RAB40ALP0C0E4 KLC2-207ENST00000421552 2721 ntTSL 5 BASIC18.37■□□□□ 0.53
RAB40ALP0C0E4 GPBAR1-202ENST00000519574 1382 ntAPPRIS P1 TSL 1 (best) BASIC18.37■□□□□ 0.53
RAB40ALP0C0E4 RTN4-207ENST00000402434 1456 ntTSL 5 BASIC18.37■□□□□ 0.53
RAB40ALP0C0E4 PPM1D-204ENST00000629650 1525 ntTSL 5 BASIC18.37■□□□□ 0.53
RAB40ALP0C0E4 AC007743.1-203ENST00000447423 1623 ntTSL 2 BASIC18.37■□□□□ 0.53
RAB40ALP0C0E4 SNX32-201ENST00000308342 2003 ntAPPRIS P1 TSL 1 (best) BASIC18.37■□□□□ 0.53
RAB40ALP0C0E4 C17orf67-201ENST00000397861 2013 ntAPPRIS P1 TSL 1 (best) BASIC18.37■□□□□ 0.53
RAB40ALP0C0E4 ZNF821-202ENST00000425432 2000 ntAPPRIS P1 TSL 5 BASIC18.37■□□□□ 0.53
RAB40ALP0C0E4 RIPPLY3-201ENST00000329553 2235 ntAPPRIS P1 TSL 1 (best) BASIC18.37■□□□□ 0.53
RAB40ALP0C0E4 GRK4-203ENST00000398052 2202 ntAPPRIS P1 TSL 1 (best) BASIC18.37■□□□□ 0.53
RAB40ALP0C0E4 SOX11-201ENST00000322002 8719 ntAPPRIS P1 BASIC18.36■□□□□ 0.53
RAB40ALP0C0E4 PPP1R3F-201ENST00000055335 3421 ntAPPRIS P1 TSL 2 BASIC18.36■□□□□ 0.53
RAB40ALP0C0E4 SNX8-201ENST00000222990 4727 ntAPPRIS P1 TSL 1 (best) BASIC18.36■□□□□ 0.53
RAB40ALP0C0E4 MTMR12-203ENST00000382142 5187 ntAPPRIS P3 TSL 1 (best) BASIC18.36■□□□□ 0.53
RAB40ALP0C0E4 NT5C1A-201ENST00000235628 1107 ntAPPRIS P1 TSL 1 (best) BASIC18.36■□□□□ 0.53
RAB40ALP0C0E4 EMC6-201ENST00000248378 653 ntAPPRIS P1 TSL 1 (best) BASIC18.36■□□□□ 0.53
RAB40ALP0C0E4 SOX15-201ENST00000250055 1396 ntAPPRIS P1 TSL 1 (best) BASIC18.36■□□□□ 0.53
RAB40ALP0C0E4 TMEM8A-201ENST00000250930 2346 ntAPPRIS ALT2 TSL 2 BASIC18.36■□□□□ 0.53
RAB40ALP0C0E4 FBLN5-202ENST00000342058 2123 ntAPPRIS P1 TSL 1 (best) BASIC18.36■□□□□ 0.53
RAB40ALP0C0E4 FAM182B-202ENST00000376404 456 ntAPPRIS ALT2 BASIC18.36■□□□□ 0.53
RAB40ALP0C0E4 AUP1-201ENST00000377526 1695 ntAPPRIS P1 TSL 1 (best) BASIC18.36■□□□□ 0.53
RAB40ALP0C0E4 BCKDK-203ENST00000394950 1997 ntTSL 2 BASIC18.36■□□□□ 0.53
RAB40ALP0C0E4 AC113347.1-201ENST00000413321 391 ntBASIC18.36■□□□□ 0.53
RAB40ALP0C0E4 FEZF1-202ENST00000427185 1368 ntTSL 1 (best) BASIC18.36■□□□□ 0.53
RAB40ALP0C0E4 NME6-209ENST00000442597 757 ntAPPRIS P1 TSL 1 (best) BASIC18.36■□□□□ 0.53
RAB40ALP0C0E4 AL365259.1-203ENST00000451660 707 ntTSL 3 BASIC18.36■□□□□ 0.53
RAB40ALP0C0E4 ADAM9-203ENST00000466936 2053 ntTSL 2 BASIC18.36■□□□□ 0.53
RAB40ALP0C0E4 AC011506.1-201ENST00000474329 610 ntBASIC18.36■□□□□ 0.53
RAB40ALP0C0E4 ALKAL1-202ENST00000523939 536 ntAPPRIS ALT2 TSL 1 (best) BASIC18.36■□□□□ 0.53
RAB40ALP0C0E4 SIGLEC15-202ENST00000546268 1054 ntTSL 2 BASIC18.36■□□□□ 0.53
Retrieved 100 of 98,524 protein–RNA pairs in 66.3 ms