Protein–RNA interactions for Protein: P05423

POLR3D, DNA-directed RNA polymerase III subunit RPC4, humanhuman

Predicted RBP Predictions only

Length 398 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
POLR3DP05423 HIC1-207ENST00000619757 6711 ntTSL 1 (best) BASIC23.34■■□□□ 1.33
POLR3DP05423 ATPAF2-206ENST00000474627 1564 ntAPPRIS P1 TSL 1 (best) BASIC23.34■■□□□ 1.33
POLR3DP05423 ARHGAP11A-205ENST00000563864 2279 ntTSL 5 BASIC23.34■■□□□ 1.33
POLR3DP05423 GALNS-201ENST00000268695 2363 ntAPPRIS P1 TSL 1 (best) BASIC23.34■■□□□ 1.33
POLR3DP05423 CNTNAP3B-202ENST00000341990 2666 ntTSL 2 BASIC23.34■■□□□ 1.33
POLR3DP05423 TWF2-203ENST00000499914 1440 ntTSL 5 BASIC23.33■■□□□ 1.33
POLR3DP05423 SMARCB1-204ENST00000407422 1643 ntAPPRIS ALT1 TSL 1 (best) BASIC23.33■■□□□ 1.33
POLR3DP05423 PMPCB-202ENST00000428154 1714 ntTSL 1 (best) BASIC23.33■■□□□ 1.33
POLR3DP05423 NFKBIE-204ENST00000619360 2327 ntAPPRIS P1 TSL 1 (best) BASIC23.33■■□□□ 1.33
POLR3DP05423 SOX12-201ENST00000342665 4630 ntAPPRIS P1 BASIC23.33■■□□□ 1.33
POLR3DP05423 SUSD1-202ENST00000374263 2973 ntAPPRIS ALT2 TSL 2 BASIC23.33■■□□□ 1.33
POLR3DP05423 SCUBE1-201ENST00000290460 2258 ntTSL 1 (best) BASIC23.33■■□□□ 1.33
POLR3DP05423 COQ10A-201ENST00000308197 1652 ntAPPRIS P3 TSL 1 (best) BASIC23.33■■□□□ 1.33
POLR3DP05423 FUOM-203ENST00000368552 762 ntTSL 1 (best) BASIC23.33■■□□□ 1.33
POLR3DP05423 MIXL1-202ENST00000542034 839 ntTSL 1 (best) BASIC23.33■■□□□ 1.33
POLR3DP05423 AC003005.1-201ENST00000601674 582 ntAPPRIS P5 TSL 2 BASIC23.33■■□□□ 1.33
POLR3DP05423 AC004816.2-201ENST00000622856 284 ntTSL 5 BASIC23.33■■□□□ 1.33
POLR3DP05423 GPR50-AS1-201ENST00000454196 1620 ntTSL 2 BASIC23.33■■□□□ 1.32
POLR3DP05423 CAV2-201ENST00000222693 3301 ntAPPRIS P1 TSL 1 (best) BASIC23.33■■□□□ 1.32
POLR3DP05423 MUS81-201ENST00000308110 2392 ntAPPRIS P1 TSL 1 (best) BASIC23.33■■□□□ 1.32
POLR3DP05423 MAP3K15-201ENST00000338883 4012 ntAPPRIS P1 TSL 5 BASIC23.32■■□□□ 1.32
POLR3DP05423 MTUS2-202ENST00000380808 1793 ntAPPRIS P3 TSL 1 (best) BASIC23.32■■□□□ 1.32
POLR3DP05423 CRLF3-201ENST00000324238 2957 ntAPPRIS P1 TSL 1 (best) BASIC23.32■■□□□ 1.32
POLR3DP05423 ASB16-201ENST00000293414 2139 ntAPPRIS P1 TSL 1 (best) BASIC23.32■■□□□ 1.32
POLR3DP05423 MTFR1L-203ENST00000374303 2004 ntAPPRIS P1 TSL 1 (best) BASIC23.32■■□□□ 1.32
POLR3DP05423 UBAP1-204ENST00000625521 2029 ntTSL 2 BASIC23.32■■□□□ 1.32
POLR3DP05423 TMEM8A-204ENST00000431232 3691 ntAPPRIS P2 TSL 1 (best) BASIC23.32■■□□□ 1.32
POLR3DP05423 RAMP1-204ENST00000409726 734 ntTSL 3 BASIC23.32■■□□□ 1.32
POLR3DP05423 AC016582.3-201ENST00000589653 561 ntTSL 4 BASIC23.32■■□□□ 1.32
POLR3DP05423 ZNF852-201ENST00000436261 1968 ntAPPRIS P1 TSL 2 BASIC23.32■■□□□ 1.32
POLR3DP05423 PSMD6-201ENST00000295901 1430 ntAPPRIS P1 TSL 1 (best) BASIC23.32■■□□□ 1.32
POLR3DP05423 MSLN-205ENST00000563941 2109 ntAPPRIS ALT2 TSL 1 (best) BASIC23.32■■□□□ 1.32
POLR3DP05423 LINC01558-202ENST00000495520 1652 ntTSL 2 BASIC23.32■■□□□ 1.32
POLR3DP05423 NGEF-202ENST00000373552 2286 ntAPPRIS P1 TSL 2 BASIC23.31■■□□□ 1.32
POLR3DP05423 ST7-OT4-201ENST00000397750 1576 ntTSL 1 (best) BASIC23.31■■□□□ 1.32
POLR3DP05423 CBWD3-201ENST00000360171 2165 ntAPPRIS P2 TSL 1 (best) BASIC23.31■■□□□ 1.32
POLR3DP05423 DMWD-202ENST00000377735 3292 ntAPPRIS ALT2 TSL 5 BASIC23.31■■□□□ 1.32
POLR3DP05423 MAG-203ENST00000537831 2341 ntTSL 1 (best) BASIC23.31■■□□□ 1.32
POLR3DP05423 RENBP-202ENST00000393700 1388 ntAPPRIS P1 TSL 1 (best) BASIC23.31■■□□□ 1.32
POLR3DP05423 ARNTL2-204ENST00000395901 1954 ntAPPRIS ALT2 TSL 1 (best) BASIC23.31■■□□□ 1.32
POLR3DP05423 BX005266.2-202ENST00000446626 2245 ntTSL 1 (best) BASIC23.31■■□□□ 1.32
POLR3DP05423 VKORC1-202ENST00000319788 1077 ntTSL 1 (best) BASIC23.31■■□□□ 1.32
POLR3DP05423 SLC39A13-212ENST00000531974 856 ntTSL 2 BASIC23.31■■□□□ 1.32
POLR3DP05423 AC018521.5-202ENST00000577279 374 ntTSL 3 BASIC23.31■■□□□ 1.32
POLR3DP05423 CDKN2A-213ENST00000579122 666 ntTSL 3 BASIC23.31■■□□□ 1.32
POLR3DP05423 AC018521.5-201ENST00000582787 496 ntTSL 2 BASIC23.31■■□□□ 1.32
POLR3DP05423 REXO1L10P-201ENST00000615707 1290 ntBASIC23.31■■□□□ 1.32
POLR3DP05423 AL590094.1-202ENST00000634619 1131 ntTSL 5 BASIC23.31■■□□□ 1.32
POLR3DP05423 FAM189B-201ENST00000350210 2379 ntTSL 1 (best) BASIC23.31■■□□□ 1.32
POLR3DP05423 SEMA6B-202ENST00000586965 2034 ntAPPRIS ALT2 TSL 1 (best) BASIC23.31■■□□□ 1.32
POLR3DP05423 TTC12-202ENST00000393020 2541 ntTSL 5 BASIC23.31■■□□□ 1.32
POLR3DP05423 HMOX2-218ENST00000619913 1908 ntAPPRIS P1 TSL 5 BASIC23.31■■□□□ 1.32
POLR3DP05423 PODNL1-203ENST00000538371 1826 ntAPPRIS ALT2 TSL 2 BASIC23.31■■□□□ 1.32
POLR3DP05423 AP001271.2-201ENST00000624018 1556 ntBASIC23.31■■□□□ 1.32
POLR3DP05423 DHRS11-210ENST00000611337 1341 ntTSL 5 BASIC23.31■■□□□ 1.32
POLR3DP05423 KLHDC4-201ENST00000270583 1886 ntAPPRIS P3 TSL 1 (best) BASIC23.3■■□□□ 1.32
POLR3DP05423 MARK2-204ENST00000402010 4728 ntAPPRIS ALT2 TSL 1 (best) BASIC23.3■■□□□ 1.32
POLR3DP05423 GOLGA2P11-201ENST00000562660 1621 ntBASIC23.3■■□□□ 1.32
POLR3DP05423 GTF3A-201ENST00000381140 1383 ntAPPRIS ALT2 TSL 1 (best) BASIC23.3■■□□□ 1.32
POLR3DP05423 RNF224-201ENST00000445101 1798 ntAPPRIS P1 TSL 3 BASIC23.3■■□□□ 1.32
POLR3DP05423 WIPF1-203ENST00000392546 2180 ntAPPRIS P2 TSL 5 BASIC23.3■■□□□ 1.32
POLR3DP05423 SNAP91-211ENST00000520213 2168 ntTSL 1 (best) BASIC23.3■■□□□ 1.32
POLR3DP05423 NEURL4-203ENST00000570460 4890 ntAPPRIS ALT2 TSL 5 BASIC23.3■■□□□ 1.32
POLR3DP05423 HPF1-201ENST00000393381 1230 ntAPPRIS P1 TSL 1 (best) BASIC23.3■■□□□ 1.32
POLR3DP05423 AC087499.1-201ENST00000418141 1075 ntBASIC23.3■■□□□ 1.32
POLR3DP05423 DNAJC27-AS1-204ENST00000428614 780 ntTSL 3 BASIC23.3■■□□□ 1.32
POLR3DP05423 KRT8P12-201ENST00000468527 998 ntTSL 2 BASIC23.3■■□□□ 1.32
POLR3DP05423 AC093752.1-201ENST00000511950 605 ntTSL 4 BASIC23.3■■□□□ 1.32
POLR3DP05423 AC021087.1-201ENST00000512642 522 ntTSL 2 BASIC23.3■■□□□ 1.32
POLR3DP05423 FAU-207ENST00000529639 847 ntAPPRIS P1 TSL 1 (best) BASIC23.3■■□□□ 1.32
POLR3DP05423 AL158152.2-201ENST00000602703 235 ntTSL 3 BASIC23.3■■□□□ 1.32
POLR3DP05423 AC016737.2-201ENST00000609273 358 ntTSL 3 BASIC23.3■■□□□ 1.32
POLR3DP05423 CROCCP2-205ENST00000639481 1296 ntTSL 1 (best) BASIC23.3■■□□□ 1.32
POLR3DP05423 CXCL16-201ENST00000293778 2222 ntAPPRIS P2 TSL 1 (best) BASIC23.3■■□□□ 1.32
POLR3DP05423 TAF4-201ENST00000252996 4628 ntAPPRIS P1 TSL 1 (best) BASIC23.3■■□□□ 1.32
POLR3DP05423 CENPH-206ENST00000515001 1305 ntTSL 2 BASIC23.3■■□□□ 1.32
POLR3DP05423 BTBD9-205ENST00000419706 2034 ntTSL 1 (best) BASIC23.3■■□□□ 1.32
POLR3DP05423 CELF6-205ENST00000567083 1496 ntAPPRIS ALT2 TSL 2 BASIC23.3■■□□□ 1.32
POLR3DP05423 TMEM179-206ENST00000616017 1645 ntBASIC23.3■■□□□ 1.32
POLR3DP05423 COPS7A-222ENST00000626119 1768 ntTSL 3 BASIC23.29■■□□□ 1.32
POLR3DP05423 RTN4RL2-201ENST00000335099 2203 ntAPPRIS P1 TSL 1 (best) BASIC23.29■■□□□ 1.32
POLR3DP05423 ZDHHC17-201ENST00000426126 5259 ntAPPRIS P1 TSL 1 (best) BASIC23.29■■□□□ 1.32
POLR3DP05423 CSF1-203ENST00000369801 1364 ntTSL 1 (best) BASIC23.29■■□□□ 1.32
POLR3DP05423 FAM131C-201ENST00000375662 1695 ntAPPRIS P1 TSL 1 (best) BASIC23.29■■□□□ 1.32
POLR3DP05423 PYCR1-204ENST00000403172 1811 ntTSL 1 (best) BASIC23.29■■□□□ 1.32
POLR3DP05423 CSPG5-201ENST00000264723 4080 ntAPPRIS P3 TSL 1 (best) BASIC23.29■■□□□ 1.32
POLR3DP05423 METTL21A-201ENST00000272839 1210 ntTSL 5 BASIC23.29■■□□□ 1.32
POLR3DP05423 DAB1-202ENST00000371230 1150 ntTSL 5 BASIC23.29■■□□□ 1.32
POLR3DP05423 C1orf50-201ENST00000372525 996 ntAPPRIS P1 TSL 1 (best) BASIC23.29■■□□□ 1.32
POLR3DP05423 AL162231.1-203ENST00000416454 465 ntAPPRIS ALT2 TSL 2 BASIC23.29■■□□□ 1.32
POLR3DP05423 STXBP1-203ENST00000476182 566 ntTSL 5 BASIC23.29■■□□□ 1.32
POLR3DP05423 BAALC-AS1-207ENST00000522856 594 ntTSL 3 BASIC23.29■■□□□ 1.32
POLR3DP05423 SMAGP-204ENST00000603838 816 ntTSL 2 BASIC23.29■■□□□ 1.32
POLR3DP05423 DMPK-205ENST00000458663 2548 ntTSL 5 BASIC23.29■■□□□ 1.32
POLR3DP05423 RARA-201ENST00000254066 2414 ntAPPRIS P1 TSL 1 (best) BASIC23.29■■□□□ 1.32
POLR3DP05423 KANK4-202ENST00000354381 2103 ntTSL 2 BASIC23.29■■□□□ 1.32
POLR3DP05423 AL691432.2-201ENST00000607222 2038 ntBASIC23.28■■□□□ 1.32
POLR3DP05423 NARS2-201ENST00000281038 2519 ntAPPRIS P1 TSL 1 (best) BASIC23.28■■□□□ 1.32
POLR3DP05423 SETD7-202ENST00000404104 1590 ntTSL 2 BASIC23.28■■□□□ 1.32
POLR3DP05423 C17orf58-204ENST00000580729 2065 ntTSL 5 BASIC23.28■■□□□ 1.32
Retrieved 100 of 98,524 protein–RNA pairs in 19.5 ms