Protein–RNA interactions for Protein: P01903

HLA-DRA, HLA class II histocompatibility antigen, DR alpha chain, humanhuman

Predictions only

Length 254 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HLA-DRAP01903 EYA2-210ENST00000611592 2612 ntTSL 5 BASIC21■□□□□ 0.95
HLA-DRAP01903 FENDRR-203ENST00000595886 3095 ntTSL 2 BASIC21■□□□□ 0.95
HLA-DRAP01903 BACE1-203ENST00000428381 1333 ntTSL 1 (best) BASIC21■□□□□ 0.95
HLA-DRAP01903 GMPPA-213ENST00000622191 1473 ntTSL 5 BASIC21■□□□□ 0.95
HLA-DRAP01903 TOM1L1-202ENST00000445275 2228 ntTSL 2 BASIC21■□□□□ 0.95
HLA-DRAP01903 KLC2-204ENST00000394067 2898 ntAPPRIS P1 TSL 1 (best) BASIC20.99■□□□□ 0.95
HLA-DRAP01903 STIM2-211ENST00000639195 2265 ntAPPRIS ALT2 TSL 1 (best) BASIC20.99■□□□□ 0.95
HLA-DRAP01903 POC1A-202ENST00000394970 1999 ntTSL 1 (best) BASIC20.99■□□□□ 0.95
HLA-DRAP01903 L2HGDH-203ENST00000421284 1958 ntAPPRIS P1 TSL 2 BASIC20.99■□□□□ 0.95
HLA-DRAP01903 PUF60-202ENST00000349157 1821 ntAPPRIS ALT2 TSL 1 (best) BASIC20.99■□□□□ 0.95
HLA-DRAP01903 MED25-201ENST00000312865 2332 ntAPPRIS P1 TSL 1 (best) BASIC20.99■□□□□ 0.95
HLA-DRAP01903 MFSD10-201ENST00000329687 2173 ntAPPRIS P1 TSL 1 (best) BASIC20.99■□□□□ 0.95
HLA-DRAP01903 SAE1-201ENST00000270225 2049 ntAPPRIS P1 TSL 1 (best) BASIC20.99■□□□□ 0.95
HLA-DRAP01903 ACTL6A-201ENST00000392662 1899 ntTSL 2 BASIC20.99■□□□□ 0.95
HLA-DRAP01903 TMSB4X-203ENST00000380636 1702 ntAPPRIS P1 TSL 1 (best) BASIC20.99■□□□□ 0.95
HLA-DRAP01903 RORA-204ENST00000449337 1701 ntAPPRIS ALT2 TSL 1 (best) BASIC20.99■□□□□ 0.95
HLA-DRAP01903 NLRP6-201ENST00000312165 2679 ntAPPRIS P3 TSL 1 (best) BASIC20.99■□□□□ 0.95
HLA-DRAP01903 AC008060.1-201ENST00000401499 1551 ntTSL 1 (best) BASIC20.99■□□□□ 0.95
HLA-DRAP01903 SKP2-208ENST00000546211 1589 ntTSL 5 BASIC20.99■□□□□ 0.95
HLA-DRAP01903 FAM76B-204ENST00000536839 2546 ntAPPRIS ALT1 TSL 5 BASIC20.99■□□□□ 0.95
HLA-DRAP01903 MAP1LC3A-203ENST00000397709 698 ntAPPRIS P1 TSL 3 BASIC20.99■□□□□ 0.95
HLA-DRAP01903 GCSHP5-201ENST00000443090 522 ntBASIC20.99■□□□□ 0.95
HLA-DRAP01903 LMCD1-AS1-204ENST00000446281 932 ntTSL 5 BASIC20.99■□□□□ 0.95
HLA-DRAP01903 NME1-207ENST00000480143 964 ntTSL 2 BASIC20.99■□□□□ 0.95
HLA-DRAP01903 TK2-204ENST00000525974 1178 ntTSL 2 BASIC20.99■□□□□ 0.95
HLA-DRAP01903 AC142381.4-202ENST00000563973 229 ntBASIC20.99■□□□□ 0.95
HLA-DRAP01903 AL353593.2-202ENST00000602947 550 ntTSL 4 BASIC20.99■□□□□ 0.95
HLA-DRAP01903 REST-211ENST00000640168 1268 ntTSL 1 (best) BASIC20.99■□□□□ 0.95
HLA-DRAP01903 DBNL-217ENST00000468694 2068 ntAPPRIS ALT2 TSL 2 BASIC20.99■□□□□ 0.95
HLA-DRAP01903 AC005906.2-203ENST00000640962 2091 ntTSL 5 BASIC20.99■□□□□ 0.95
HLA-DRAP01903 LSM4-203ENST00000593829 1908 ntAPPRIS P1 TSL 1 (best) BASIC20.99■□□□□ 0.95
HLA-DRAP01903 MTX1-202ENST00000368376 1632 ntTSL 1 (best) BASIC20.99■□□□□ 0.95
HLA-DRAP01903 BIN2-210ENST00000615107 2255 ntAPPRIS P1 TSL 1 (best) BASIC20.99■□□□□ 0.95
HLA-DRAP01903 DISC1-215ENST00000602281 2761 ntAPPRIS ALT2 TSL 1 (best) BASIC20.99■□□□□ 0.95
HLA-DRAP01903 IKBKG-207ENST00000611071 2103 ntAPPRIS P3 TSL 1 (best) BASIC20.99■□□□□ 0.95
HLA-DRAP01903 LINC02361-201ENST00000538731 1484 ntTSL 2 BASIC20.99■□□□□ 0.95
HLA-DRAP01903 CYB561-213ENST00000581573 2344 ntAPPRIS P1 TSL 1 (best) BASIC20.99■□□□□ 0.95
HLA-DRAP01903 CTBP2-205ENST00000411419 2036 ntAPPRIS P1 TSL 1 (best) BASIC20.99■□□□□ 0.95
HLA-DRAP01903 PTGER2-201ENST00000245457 2383 ntAPPRIS P1 TSL 1 (best) BASIC20.99■□□□□ 0.95
HLA-DRAP01903 CNNM1-201ENST00000356713 5959 ntAPPRIS P1 TSL 1 (best) BASIC20.98■□□□□ 0.95
HLA-DRAP01903 HIC1-207ENST00000619757 6711 ntTSL 1 (best) BASIC20.98■□□□□ 0.95
HLA-DRAP01903 WBP2-213ENST00000590221 1745 ntAPPRIS ALT1 TSL 3 BASIC20.98■□□□□ 0.95
HLA-DRAP01903 GPR31-201ENST00000366834 2059 ntAPPRIS P1 BASIC20.98■□□□□ 0.95
HLA-DRAP01903 CHTOP-204ENST00000368694 2096 ntAPPRIS P3 TSL 1 (best) BASIC20.98■□□□□ 0.95
HLA-DRAP01903 TP73-202ENST00000354437 2140 ntTSL 5 BASIC20.98■□□□□ 0.95
HLA-DRAP01903 RPP25L-201ENST00000297613 1092 ntAPPRIS P1 TSL 2 BASIC20.98■□□□□ 0.95
HLA-DRAP01903 MCAT-202ENST00000327555 1134 ntTSL 1 (best) BASIC20.98■□□□□ 0.95
HLA-DRAP01903 BOLA1-203ENST00000369153 1096 ntAPPRIS P1 TSL 3 BASIC20.98■□□□□ 0.95
HLA-DRAP01903 AC022509.3-202ENST00000545819 566 ntTSL 3 BASIC20.98■□□□□ 0.95
HLA-DRAP01903 RNASEK-202ENST00000548577 810 ntTSL 1 (best) BASIC20.98■□□□□ 0.95
HLA-DRAP01903 AC140479.4-201ENST00000561715 463 ntTSL 4 BASIC20.98■□□□□ 0.95
HLA-DRAP01903 AC100835.1-201ENST00000565737 498 ntTSL 5 BASIC20.98■□□□□ 0.95
HLA-DRAP01903 C1QL1P1-201ENST00000568105 661 ntBASIC20.98■□□□□ 0.95
HLA-DRAP01903 AC007493.2-201ENST00000568427 478 ntTSL 3 BASIC20.98■□□□□ 0.95
HLA-DRAP01903 AC004771.5-201ENST00000575985 542 ntTSL 4 BASIC20.98■□□□□ 0.95
HLA-DRAP01903 JOSD2-202ENST00000595669 733 ntTSL 2 BASIC20.98■□□□□ 0.95
HLA-DRAP01903 FAM197Y4-202ENST00000622692 608 ntBASIC20.98■□□□□ 0.95
HLA-DRAP01903 RAVER2-201ENST00000294428 4398 ntAPPRIS ALT2 TSL 5 BASIC20.98■□□□□ 0.95
HLA-DRAP01903 KLHDC4-203ENST00000347925 1821 ntTSL 1 (best) BASIC20.98■□□□□ 0.95
HLA-DRAP01903 SLC16A5-206ENST00000580123 2019 ntAPPRIS P2 TSL 2 BASIC20.98■□□□□ 0.95
HLA-DRAP01903 THOP1-202ENST00000395212 1877 ntTSL 2 BASIC20.98■□□□□ 0.95
HLA-DRAP01903 ILF3-217ENST00000589998 2622 ntTSL 2 BASIC20.98■□□□□ 0.95
HLA-DRAP01903 FBXO28-202ENST00000424254 1334 ntTSL 1 (best) BASIC20.98■□□□□ 0.95
HLA-DRAP01903 DOK7-206ENST00000515886 2263 ntTSL 2 BASIC20.98■□□□□ 0.95
HLA-DRAP01903 HS3ST4-201ENST00000331351 3203 ntAPPRIS P1 TSL 1 (best) BASIC20.98■□□□□ 0.95
HLA-DRAP01903 ZNF12-201ENST00000342651 2921 ntAPPRIS ALT2 TSL 2 BASIC20.98■□□□□ 0.95
HLA-DRAP01903 PVRIG-201ENST00000317271 1583 ntAPPRIS P1 TSL 1 (best) BASIC20.97■□□□□ 0.95
HLA-DRAP01903 WDR41-208ENST00000507029 1553 ntTSL 2 BASIC20.97■□□□□ 0.95
HLA-DRAP01903 EPOR-201ENST00000222139 2411 ntAPPRIS P1 TSL 1 (best) BASIC20.97■□□□□ 0.95
HLA-DRAP01903 C19orf66-209ENST00000591813 1481 ntAPPRIS ALT2 TSL 1 (best) BASIC20.97■□□□□ 0.95
HLA-DRAP01903 SIVA1-201ENST00000329967 802 ntAPPRIS P2 TSL 1 (best) BASIC20.97■□□□□ 0.95
HLA-DRAP01903 PEX7-202ENST00000367756 680 ntTSL 3 BASIC20.97■□□□□ 0.95
HLA-DRAP01903 AL158047.1-201ENST00000445918 881 ntBASIC20.97■□□□□ 0.95
HLA-DRAP01903 CDH18-AS1-201ENST00000513573 424 ntTSL 2 BASIC20.97■□□□□ 0.95
HLA-DRAP01903 COX6C-208ENST00000522940 694 ntAPPRIS P1 TSL 3 BASIC20.97■□□□□ 0.95
HLA-DRAP01903 MTFP1-206ENST00000629597 482 ntTSL 5 BASIC20.97■□□□□ 0.95
HLA-DRAP01903 TMEM191A-211ENST00000637163 1067 ntBASIC20.97■□□□□ 0.95
HLA-DRAP01903 DOK1-201ENST00000233668 2555 ntAPPRIS P1 TSL 1 (best) BASIC20.97■□□□□ 0.95
HLA-DRAP01903 RNASEH2C-203ENST00000528220 1337 ntTSL 2 BASIC20.97■□□□□ 0.95
HLA-DRAP01903 KRT78-201ENST00000304620 1778 ntAPPRIS P3 TSL 1 (best) BASIC20.97■□□□□ 0.95
HLA-DRAP01903 AC004982.2-201ENST00000609497 1578 ntTSL 2 BASIC20.97■□□□□ 0.95
HLA-DRAP01903 NYX-202ENST00000378220 2297 ntAPPRIS P1 TSL 1 (best) BASIC20.97■□□□□ 0.95
HLA-DRAP01903 PRKAR2A-206ENST00000454963 1849 ntAPPRIS P1 TSL 2 BASIC20.97■□□□□ 0.95
HLA-DRAP01903 FAM3A-203ENST00000369641 1359 ntTSL 5 BASIC20.97■□□□□ 0.95
HLA-DRAP01903 MAG-203ENST00000537831 2341 ntTSL 1 (best) BASIC20.96■□□□□ 0.95
HLA-DRAP01903 Z82202.1-201ENST00000623446 1880 ntBASIC20.96■□□□□ 0.95
HLA-DRAP01903 GPR3-201ENST00000374024 2115 ntAPPRIS P1 TSL 1 (best) BASIC20.96■□□□□ 0.95
HLA-DRAP01903 CDH5-204ENST00000563425 1932 ntTSL 5 BASIC20.96■□□□□ 0.95
HLA-DRAP01903 CXorf49-202ENST00000535490 1715 ntAPPRIS P1 TSL 5 BASIC20.96■□□□□ 0.95
HLA-DRAP01903 CXorf49B-202ENST00000542739 1715 ntAPPRIS P1 TSL 5 BASIC20.96■□□□□ 0.95
HLA-DRAP01903 ZIM2-208ENST00000629319 2253 ntAPPRIS P1 TSL 5 BASIC20.96■□□□□ 0.95
HLA-DRAP01903 SNAPC2-201ENST00000221573 1542 ntAPPRIS P1 TSL 1 (best) BASIC20.96■□□□□ 0.95
HLA-DRAP01903 B4GALT1-202ENST00000535206 1535 ntTSL 1 (best) BASIC20.96■□□□□ 0.95
HLA-DRAP01903 TSPY8-201ENST00000287721 1161 ntAPPRIS P5 TSL 1 (best) BASIC20.96■□□□□ 0.95
HLA-DRAP01903 GLI4-202ENST00000344692 1012 ntTSL 2 BASIC20.96■□□□□ 0.95
HLA-DRAP01903 TSPY10-201ENST00000428845 1161 ntAPPRIS P5 TSL 1 (best) BASIC20.96■□□□□ 0.95
HLA-DRAP01903 DYNLT3-203ENST00000432389 719 ntTSL 5 BASIC20.96■□□□□ 0.95
HLA-DRAP01903 AC073050.1-201ENST00000442316 462 ntTSL 3 BASIC20.96■□□□□ 0.95
HLA-DRAP01903 TSPY3-203ENST00000457222 1161 ntAPPRIS P5 TSL 1 (best) BASIC20.96■□□□□ 0.95
HLA-DRAP01903 AC091564.5-201ENST00000526456 820 ntTSL 4 BASIC20.96■□□□□ 0.95
Retrieved 100 of 98,524 protein–RNA pairs in 52.5 ms