Protein–RNA interactions for Protein: O76070

SNCG, Gamma-synuclein, humanhuman

Predictions only

Length 127 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SNCGO76070 TRIM15-210ENST00000619857 2217 ntTSL 5 BASIC13.15□□□□□ -0.3
SNCGO76070 AP2A2-201ENST00000332231 4656 ntAPPRIS ALT1 TSL 1 (best) BASIC13.15□□□□□ -0.3
SNCGO76070 ITSN1-212ENST00000399367 5722 ntAPPRIS ALT1 TSL 1 (best) BASIC13.15□□□□□ -0.3
SNCGO76070 ANKS3-201ENST00000304283 2662 ntAPPRIS P1 TSL 2 BASIC13.15□□□□□ -0.3
SNCGO76070 FOXI1-201ENST00000306268 1990 ntAPPRIS P1 TSL 1 (best) BASIC13.15□□□□□ -0.3
SNCGO76070 SREBF1-201ENST00000261646 4178 ntAPPRIS P3 TSL 1 (best) BASIC13.15□□□□□ -0.3
SNCGO76070 RAB33A-201ENST00000257017 1258 ntAPPRIS P1 TSL 1 (best) BASIC13.15□□□□□ -0.3
SNCGO76070 MMP25-AS1-209ENST00000576250 779 ntTSL 5 BASIC13.15□□□□□ -0.3
SNCGO76070 FAM222B-205ENST00000577682 549 ntTSL 4 BASIC13.15□□□□□ -0.3
SNCGO76070 EHD3-201ENST00000322054 4636 ntAPPRIS P1 TSL 1 (best) BASIC13.15□□□□□ -0.3
SNCGO76070 MAPK11-201ENST00000330651 2431 ntAPPRIS P1 TSL 1 (best) BASIC13.15□□□□□ -0.3
SNCGO76070 SLC16A3-201ENST00000392339 2074 ntAPPRIS P1 TSL 5 BASIC13.15□□□□□ -0.3
SNCGO76070 SLC16A3-202ENST00000392341 2086 ntAPPRIS P1 TSL 5 BASIC13.15□□□□□ -0.3
SNCGO76070 CMPK2-201ENST00000256722 2884 ntAPPRIS P3 TSL 1 (best) BASIC13.15□□□□□ -0.3
SNCGO76070 CFAP46-202ENST00000368586 8278 ntAPPRIS P2 TSL 5 BASIC13.15□□□□□ -0.3
SNCGO76070 PITPNM2-201ENST00000280562 6785 ntAPPRIS ALT2 TSL 5 BASIC13.15□□□□□ -0.3
SNCGO76070 BNIP2-213ENST00000612191 2515 ntTSL 1 (best) BASIC13.15□□□□□ -0.3
SNCGO76070 TINAGL1-201ENST00000271064 2187 ntAPPRIS P3 TSL 1 (best) BASIC13.15□□□□□ -0.3
SNCGO76070 PDE4C-207ENST00000594617 4655 ntAPPRIS P3 TSL 1 (best) BASIC13.15□□□□□ -0.3
SNCGO76070 DMRT2-204ENST00000382251 2292 ntAPPRIS P1 TSL 5 BASIC13.15□□□□□ -0.3
SNCGO76070 AC124067.4-201ENST00000519691 2379 ntBASIC13.15□□□□□ -0.3
SNCGO76070 EIF2B1-201ENST00000424014 2477 ntAPPRIS P1 TSL 1 (best) BASIC13.15□□□□□ -0.3
SNCGO76070 HNRNPUL2-BSCL2-201ENST00000403734 4001 ntAPPRIS P1 TSL 2 BASIC13.15□□□□□ -0.3
SNCGO76070 SLC35E2B-203ENST00000611123 5948 ntAPPRIS P1 TSL 2 BASIC13.15□□□□□ -0.3
SNCGO76070 PUS1-203ENST00000443358 1664 ntAPPRIS ALT2 TSL 1 (best) BASIC13.15□□□□□ -0.31
SNCGO76070 CASR-202ENST00000498619 5009 ntTSL 1 (best) BASIC13.15□□□□□ -0.31
SNCGO76070 UBAP1L-203ENST00000559089 1694 ntAPPRIS P1 TSL 1 (best) BASIC13.15□□□□□ -0.31
SNCGO76070 PCDHA1-202ENST00000394633 2204 ntTSL 1 (best) BASIC13.15□□□□□ -0.31
SNCGO76070 PDCD2-203ENST00000443345 1897 ntTSL 1 (best) BASIC13.14□□□□□ -0.31
SNCGO76070 ARNTL2-209ENST00000546179 1861 ntAPPRIS ALT2 TSL 2 BASIC13.14□□□□□ -0.31
SNCGO76070 MAPK15-201ENST00000338033 1961 ntAPPRIS P1 TSL 1 (best) BASIC13.14□□□□□ -0.31
SNCGO76070 PKMYT1-204ENST00000440027 2061 ntTSL 2 BASIC13.14□□□□□ -0.31
SNCGO76070 LINC01089-202ENST00000429892 1521 ntTSL 1 (best) BASIC13.14□□□□□ -0.31
SNCGO76070 MADCAM1-205ENST00000613880 1509 ntAPPRIS ALT2 TSL 5 BASIC13.14□□□□□ -0.31
SNCGO76070 NFKB2-201ENST00000189444 3011 ntAPPRIS ALT1 TSL 1 (best) BASIC13.14□□□□□ -0.31
SNCGO76070 ICA1-206ENST00000402384 2458 ntAPPRIS P3 TSL 2 BASIC13.14□□□□□ -0.31
SNCGO76070 LTF-203ENST00000426532 2494 ntTSL 2 BASIC13.14□□□□□ -0.31
SNCGO76070 HIC2-202ENST00000407598 4734 ntAPPRIS P1 TSL 1 (best) BASIC13.14□□□□□ -0.31
SNCGO76070 MAP4K3-202ENST00000341681 4271 ntTSL 1 (best) BASIC13.14□□□□□ -0.31
SNCGO76070 SLC16A5-206ENST00000580123 2019 ntAPPRIS P2 TSL 2 BASIC13.14□□□□□ -0.31
SNCGO76070 TTLL7-214ENST00000610996 2028 ntTSL 5 BASIC13.14□□□□□ -0.31
SNCGO76070 C17orf113-201ENST00000587304 3746 ntAPPRIS P1 TSL 5 BASIC13.14□□□□□ -0.31
SNCGO76070 MIR639-201ENST00000384974 98 ntBASIC13.14□□□□□ -0.31
SNCGO76070 WDR4-202ENST00000398208 2122 ntAPPRIS P1 TSL 1 (best) BASIC13.14□□□□□ -0.31
SNCGO76070 CLIC3-203ENST00000494426 1017 ntAPPRIS P1 TSL 1 (best) BASIC13.14□□□□□ -0.31
SNCGO76070 AC139795.1-203ENST00000515045 853 ntTSL 2 BASIC13.14□□□□□ -0.31
SNCGO76070 MIR6722-201ENST00000617286 78 ntBASIC13.14□□□□□ -0.31
SNCGO76070 TMEM240-203ENST00000624426 796 ntTSL 3 BASIC13.14□□□□□ -0.31
SNCGO76070 OPA1-202ENST00000361510 6492 ntAPPRIS ALT2 TSL 5 BASIC13.14□□□□□ -0.31
SNCGO76070 LEF1-201ENST00000265165 3068 ntAPPRIS P3 TSL 1 (best) BASIC13.14□□□□□ -0.31
SNCGO76070 AL390879.2-201ENST00000424306 2222 ntTSL 2 BASIC13.14□□□□□ -0.31
SNCGO76070 PLPP2-202ENST00000327790 1397 ntTSL 5 BASIC13.14□□□□□ -0.31
SNCGO76070 DET1-207ENST00000564406 2315 ntTSL 2 BASIC13.14□□□□□ -0.31
SNCGO76070 TRAPPC11-202ENST00000357207 4435 ntTSL 1 (best) BASIC13.14□□□□□ -0.31
SNCGO76070 C19orf54-203ENST00000470681 2521 ntTSL 2 BASIC13.14□□□□□ -0.31
SNCGO76070 PANO1-201ENST00000620120 1680 ntAPPRIS P1 BASIC13.14□□□□□ -0.31
SNCGO76070 BCL2L11-219ENST00000619294 5132 ntTSL 5 BASIC13.14□□□□□ -0.31
SNCGO76070 EML3-216ENST00000529309 2909 ntTSL 2 BASIC13.14□□□□□ -0.31
SNCGO76070 BEAN1-202ENST00000536005 1988 ntTSL 1 (best) BASIC13.14□□□□□ -0.31
SNCGO76070 KCNN2-207ENST00000610748 2091 ntTSL 3 BASIC13.14□□□□□ -0.31
SNCGO76070 AC011416.4-201ENST00000639283 2195 ntTSL 5 BASIC13.14□□□□□ -0.31
SNCGO76070 BAP1-202ENST00000460680 3937 ntAPPRIS P1 TSL 1 (best) BASIC13.14□□□□□ -0.31
SNCGO76070 XKR4-203ENST00000622811 3907 ntAPPRIS P1 TSL 5 BASIC13.14□□□□□ -0.31
SNCGO76070 ELK4-202ENST00000357992 10239 ntAPPRIS P1 TSL 1 (best) BASIC13.14□□□□□ -0.31
SNCGO76070 FBLN1-204ENST00000402984 2355 ntTSL 5 BASIC13.14□□□□□ -0.31
SNCGO76070 SLCO4A1-202ENST00000370507 2665 ntAPPRIS P1 TSL 1 (best) BASIC13.14□□□□□ -0.31
SNCGO76070 RAB4A-201ENST00000366690 2966 ntAPPRIS P1 TSL 1 (best) BASIC13.14□□□□□ -0.31
SNCGO76070 GOLGA6L9-202ENST00000618348 1710 ntAPPRIS P1 TSL 5 BASIC13.13□□□□□ -0.31
SNCGO76070 FASTK-201ENST00000297532 1827 ntAPPRIS P1 TSL 1 (best) BASIC13.13□□□□□ -0.31
SNCGO76070 XBP1-203ENST00000403532 1824 ntAPPRIS ALT1 TSL 3 BASIC13.13□□□□□ -0.31
SNCGO76070 AMDHD2-203ENST00000413459 2049 ntTSL 2 BASIC13.13□□□□□ -0.31
SNCGO76070 FFAR2-202ENST00000599180 2133 ntAPPRIS P1 TSL 1 (best) BASIC13.13□□□□□ -0.31
SNCGO76070 IL4I1-201ENST00000341114 2349 ntAPPRIS P4 TSL 1 (best) BASIC13.13□□□□□ -0.31
SNCGO76070 ZNF517-201ENST00000359971 2335 ntAPPRIS P1 TSL 4 BASIC13.13□□□□□ -0.31
SNCGO76070 CD24-204ENST00000619133 2513 ntAPPRIS P3 TSL 2 BASIC13.13□□□□□ -0.31
SNCGO76070 RABGAP1L-204ENST00000357444 2605 ntTSL 1 (best) BASIC13.13□□□□□ -0.31
SNCGO76070 EXD3-201ENST00000340951 2872 ntAPPRIS P1 TSL 1 (best) BASIC13.13□□□□□ -0.31
SNCGO76070 HIBCH-202ENST00000392332 2463 ntTSL 1 (best) BASIC13.13□□□□□ -0.31
SNCGO76070 PDZD3-202ENST00000355547 2252 ntAPPRIS P1 TSL 1 (best) BASIC13.13□□□□□ -0.31
SNCGO76070 PTP4A3-203ENST00000520105 1866 ntTSL 5 BASIC13.13□□□□□ -0.31
SNCGO76070 PDZD3-203ENST00000525131 1882 ntTSL 2 BASIC13.13□□□□□ -0.31
SNCGO76070 CXCL16-203ENST00000574412 1668 ntAPPRIS P2 TSL 1 (best) BASIC13.13□□□□□ -0.31
SNCGO76070 SDC3-202ENST00000339394 1580 ntAPPRIS P1 TSL 1 (best) BASIC13.13□□□□□ -0.31
SNCGO76070 GSG1L-202ENST00000395724 1399 ntAPPRIS ALT2 TSL 1 (best) BASIC13.13□□□□□ -0.31
SNCGO76070 AC107214.1-201ENST00000457303 559 ntTSL 1 (best) BASIC13.13□□□□□ -0.31
SNCGO76070 NDEL1-219ENST00000585098 454 ntTSL 3 BASIC13.13□□□□□ -0.31
SNCGO76070 GNAS-AS1_1.1-201ENST00000621898 103 ntBASIC13.13□□□□□ -0.31
SNCGO76070 PTPRA-205ENST00000399903 3337 ntTSL 5 BASIC13.13□□□□□ -0.31
SNCGO76070 GAS2L1-208ENST00000616432 2925 ntAPPRIS P1 TSL 1 (best) BASIC13.13□□□□□ -0.31
SNCGO76070 NOS3-210ENST00000484524 2537 ntTSL 1 (best) BASIC13.13□□□□□ -0.31
SNCGO76070 TANGO2-217ENST00000456048 2439 ntTSL 2 BASIC13.13□□□□□ -0.31
SNCGO76070 KAT5-203ENST00000377046 2237 ntAPPRIS P1 TSL 1 (best) BASIC13.13□□□□□ -0.31
SNCGO76070 TRA2A-202ENST00000392502 2229 ntAPPRIS ALT2 TSL 2 BASIC13.13□□□□□ -0.31
SNCGO76070 AL138781.2-201ENST00000617896 1843 ntBASIC13.13□□□□□ -0.31
SNCGO76070 TCIRG1-201ENST00000265686 2677 ntAPPRIS P1 TSL 1 (best) BASIC13.13□□□□□ -0.31
SNCGO76070 OSBPL3-201ENST00000313367 6760 ntAPPRIS P1 TSL 1 (best) BASIC13.13□□□□□ -0.31
SNCGO76070 SDSL-202ENST00000403593 1449 ntAPPRIS P1 TSL 1 (best) BASIC13.13□□□□□ -0.31
SNCGO76070 EGFL8-220ENST00000395512 1312 ntAPPRIS P1 TSL 1 (best) BASIC13.13□□□□□ -0.31
SNCGO76070 CCDC157-201ENST00000338306 3001 ntAPPRIS P3 TSL 5 BASIC13.13□□□□□ -0.31
SNCGO76070 FGF7P6-201ENST00000377614 1890 ntTSL 1 (best) BASIC13.12□□□□□ -0.31
Retrieved 100 of 98,524 protein–RNA pairs in 21.7 ms