Protein–RNA interactions for Protein: O75909

CCNK, Cyclin-K, humanhuman

Predictions only

Length 580 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCNKO75909 DCAF17-211ENST00000539783 5623 ntAPPRIS ALT2 TSL 5 BASIC16.91■□□□□ 0.3
CCNKO75909 FAM110A-204ENST00000381941 1809 ntAPPRIS P1 TSL 1 (best) BASIC16.91■□□□□ 0.3
CCNKO75909 FAHD1-202ENST00000382668 1845 ntTSL 1 (best) BASIC16.91■□□□□ 0.3
CCNKO75909 EWSR1-206ENST00000397938 2654 ntAPPRIS ALT2 TSL 1 (best) BASIC16.91■□□□□ 0.3
CCNKO75909 PTPDC1-202ENST00000375360 4517 ntAPPRIS ALT2 TSL 1 (best) BASIC16.91■□□□□ 0.3
CCNKO75909 ASB6-203ENST00000450050 4535 ntTSL 1 (best) BASIC16.91■□□□□ 0.3
CCNKO75909 CRHR2-207ENST00000471646 2530 ntAPPRIS P1 TSL 1 (best) BASIC16.91■□□□□ 0.3
CCNKO75909 ENOPH1-201ENST00000273920 2025 ntAPPRIS P1 TSL 1 (best) BASIC16.91■□□□□ 0.3
CCNKO75909 DIP2A-205ENST00000466639 2711 ntTSL 1 (best) BASIC16.9■□□□□ 0.3
CCNKO75909 CPT2-208ENST00000636891 2746 ntTSL 5 BASIC16.9■□□□□ 0.3
CCNKO75909 CPT2-210ENST00000637252 2739 ntTSL 5 BASIC16.9■□□□□ 0.3
CCNKO75909 SLC35B1-201ENST00000240333 1850 ntAPPRIS P1 TSL 1 (best) BASIC16.9■□□□□ 0.3
CCNKO75909 CACNA2D2-201ENST00000266039 5476 ntAPPRIS ALT2 TSL 1 (best) BASIC16.9■□□□□ 0.3
CCNKO75909 NDRG2-242ENST00000555158 2216 ntAPPRIS ALT1 TSL 1 (best) BASIC16.9■□□□□ 0.3
CCNKO75909 DMPK-204ENST00000447742 2754 ntAPPRIS ALT2 TSL 1 (best) BASIC16.9■□□□□ 0.3
CCNKO75909 EPHX3-202ENST00000435261 1771 ntAPPRIS P1 TSL 1 (best) BASIC16.9■□□□□ 0.3
CCNKO75909 HDAC10-201ENST00000216271 2687 ntAPPRIS P1 TSL 1 (best) BASIC16.9■□□□□ 0.3
CCNKO75909 NBL1-210ENST00000615215 2160 ntAPPRIS ALT2 TSL 1 (best) BASIC16.9■□□□□ 0.3
CCNKO75909 BTBD1-201ENST00000261721 3297 ntAPPRIS P1 TSL 1 (best) BASIC16.9■□□□□ 0.3
CCNKO75909 HMX3-201ENST00000357878 1173 ntAPPRIS P1 TSL 2 BASIC16.9■□□□□ 0.3
CCNKO75909 AC007114.1-201ENST00000576871 713 ntTSL 2 BASIC16.9■□□□□ 0.3
CCNKO75909 PRMT5-228ENST00000627278 129 ntTSL 5 BASIC16.9■□□□□ 0.3
CCNKO75909 FDXR-202ENST00000413947 1809 ntTSL 2 BASIC16.9■□□□□ 0.3
CCNKO75909 CYTH2-204ENST00000452733 4780 ntAPPRIS P2 TSL 1 (best) BASIC16.9■□□□□ 0.3
CCNKO75909 STX4-202ENST00000394998 1498 ntTSL 2 BASIC16.9■□□□□ 0.3
CCNKO75909 TRAM1-201ENST00000262213 2785 ntAPPRIS P1 TSL 1 (best) BASIC16.9■□□□□ 0.3
CCNKO75909 ST6GALNAC6-202ENST00000373141 2424 ntAPPRIS ALT1 TSL 2 BASIC16.9■□□□□ 0.3
CCNKO75909 MIPEP-201ENST00000382172 2400 ntAPPRIS P1 TSL 1 (best) BASIC16.9■□□□□ 0.3
CCNKO75909 UBQLN4-201ENST00000368309 3576 ntAPPRIS P1 TSL 1 (best) BASIC16.9■□□□□ 0.3
CCNKO75909 DBNL-217ENST00000468694 2068 ntAPPRIS ALT2 TSL 2 BASIC16.9■□□□□ 0.3
CCNKO75909 RHOF-201ENST00000267205 3009 ntAPPRIS P1 TSL 1 (best) BASIC16.9■□□□□ 0.3
CCNKO75909 NINL-201ENST00000278886 4969 ntAPPRIS P3 TSL 1 (best) BASIC16.9■□□□□ 0.3
CCNKO75909 NUDT9-201ENST00000302174 1701 ntAPPRIS P1 TSL 1 (best) BASIC16.9■□□□□ 0.3
CCNKO75909 SLC35F3-202ENST00000366618 2891 ntAPPRIS P3 TSL 2 BASIC16.9■□□□□ 0.3
CCNKO75909 OTUB1-209ENST00000538426 1729 ntAPPRIS P2 TSL 1 (best) BASIC16.9■□□□□ 0.3
CCNKO75909 ZNF281-203ENST00000367353 3080 ntAPPRIS P3 TSL 1 (best) BASIC16.9■□□□□ 0.3
CCNKO75909 TXNL4A-201ENST00000269601 3504 ntAPPRIS P1 TSL 1 (best) BASIC16.9■□□□□ 0.3
CCNKO75909 SIRPAP1-201ENST00000448467 1770 ntBASIC16.89■□□□□ 0.3
CCNKO75909 LIN28B-AS1-203ENST00000636682 1797 ntTSL 3 BASIC16.89■□□□□ 0.3
CCNKO75909 GBGT1-203ENST00000372040 1980 ntAPPRIS P1 TSL 1 (best) BASIC16.89■□□□□ 0.3
CCNKO75909 HYOU1-212ENST00000532519 2162 ntTSL 5 BASIC16.89■□□□□ 0.3
CCNKO75909 LRRC58-201ENST00000295628 7903 ntAPPRIS P1 TSL 1 (best) BASIC16.89■□□□□ 0.3
CCNKO75909 FERMT2-203ENST00000395631 3369 ntAPPRIS P1 TSL 1 (best) BASIC16.89■□□□□ 0.3
CCNKO75909 AXIN1-201ENST00000262320 3643 ntAPPRIS P4 TSL 1 (best) BASIC16.89■□□□□ 0.29
CCNKO75909 MBD1-206ENST00000382948 2434 ntAPPRIS P3 TSL 2 BASIC16.89■□□□□ 0.29
CCNKO75909 PRKRA-201ENST00000325748 1826 ntAPPRIS P1 TSL 1 (best) BASIC16.89■□□□□ 0.29
CCNKO75909 HIBCH-202ENST00000392332 2463 ntTSL 1 (best) BASIC16.89■□□□□ 0.29
CCNKO75909 TMCO6-203ENST00000394671 1887 ntAPPRIS P1 TSL 2 BASIC16.89■□□□□ 0.29
CCNKO75909 SCARB2-223ENST00000640640 4608 ntTSL 5 BASIC16.89■□□□□ 0.29
CCNKO75909 SKOR1-204ENST00000554240 3597 ntAPPRIS ALT2 TSL 5 BASIC16.89■□□□□ 0.29
CCNKO75909 ATP6V0E2-204ENST00000464662 513 ntAPPRIS P1 TSL 2 BASIC16.89■□□□□ 0.29
CCNKO75909 AC136475.3-202ENST00000534742 812 ntTSL 2 BASIC16.89■□□□□ 0.29
CCNKO75909 Z92544.1-202ENST00000571933 1220 ntBASIC16.89■□□□□ 0.29
CCNKO75909 NAP1L4-212ENST00000526115 1941 ntTSL 2 BASIC16.89■□□□□ 0.29
CCNKO75909 FCGBP-203ENST00000620799 4926 ntTSL 5 BASIC16.89■□□□□ 0.29
CCNKO75909 HSPA4-205ENST00000617074 2358 ntTSL 5 BASIC16.89■□□□□ 0.29
CCNKO75909 CDC25A-202ENST00000351231 3663 ntTSL 1 (best) BASIC16.89■□□□□ 0.29
CCNKO75909 WDFY4-202ENST00000360890 2193 ntTSL 1 (best) BASIC16.89■□□□□ 0.29
CCNKO75909 AHSA2-202ENST00000394457 6574 ntTSL 1 (best) BASIC16.89■□□□□ 0.29
CCNKO75909 MIB2-232ENST00000520777 3321 ntAPPRIS ALT2 TSL 1 (best) BASIC16.89■□□□□ 0.29
CCNKO75909 TRIM63-201ENST00000374272 1770 ntAPPRIS P1 TSL 1 (best) BASIC16.89■□□□□ 0.29
CCNKO75909 FAM184A-214ENST00000621231 4048 ntTSL 5 BASIC16.89■□□□□ 0.29
CCNKO75909 CD276-201ENST00000318424 2738 ntTSL 5 BASIC16.89■□□□□ 0.29
CCNKO75909 ZNF584-209ENST00000599238 2288 ntTSL 1 (best) BASIC16.89■□□□□ 0.29
CCNKO75909 SSR1-204ENST00000474597 1808 ntTSL 5 BASIC16.89■□□□□ 0.29
CCNKO75909 PKMYT1-216ENST00000574730 1806 ntTSL 2 BASIC16.89■□□□□ 0.29
CCNKO75909 REPIN1-203ENST00000444957 2969 ntAPPRIS P3 TSL 1 (best) BASIC16.89■□□□□ 0.29
CCNKO75909 ADAMTS16-201ENST00000274181 4979 ntAPPRIS P1 TSL 2 BASIC16.88■□□□□ 0.29
CCNKO75909 LGI4-202ENST00000392225 2891 ntTSL 5 BASIC16.88■□□□□ 0.29
CCNKO75909 CSRNP1-201ENST00000273153 3148 ntAPPRIS P1 TSL 1 (best) BASIC16.88■□□□□ 0.29
CCNKO75909 AHRR-209ENST00000512529 1912 ntTSL 5 BASIC16.88■□□□□ 0.29
CCNKO75909 TTLL12-201ENST00000216129 3385 ntAPPRIS P1 TSL 1 (best) BASIC16.88■□□□□ 0.29
CCNKO75909 INPP4A-205ENST00000409851 3365 ntTSL 1 (best) BASIC16.88■□□□□ 0.29
CCNKO75909 SCNN1D-201ENST00000325425 2679 ntAPPRIS ALT2 TSL 1 (best) BASIC16.88■□□□□ 0.29
CCNKO75909 LRRC20-203ENST00000358141 2924 ntTSL 2 BASIC16.88■□□□□ 0.29
CCNKO75909 FGFR4-203ENST00000393648 2733 ntAPPRIS ALT2 TSL 2 BASIC16.88■□□□□ 0.29
CCNKO75909 TRAF3IP1-201ENST00000373327 4279 ntAPPRIS P3 TSL 1 (best) BASIC16.88■□□□□ 0.29
CCNKO75909 IMPA2-201ENST00000269159 1534 ntAPPRIS P1 TSL 1 (best) BASIC16.88■□□□□ 0.29
CCNKO75909 APCDD1-201ENST00000355285 3809 ntAPPRIS P1 TSL 1 (best) BASIC16.88■□□□□ 0.29
CCNKO75909 FEZ1-202ENST00000366139 1053 ntTSL 2 BASIC16.88■□□□□ 0.29
CCNKO75909 MYD88-205ENST00000424893 1279 ntAPPRIS ALT2 TSL 1 (best) BASIC16.88■□□□□ 0.29
CCNKO75909 pRNA.6-201ENST00000610482 90 ntBASIC16.88■□□□□ 0.29
CCNKO75909 pRNA.5-201ENST00000612139 90 ntBASIC16.88■□□□□ 0.29
CCNKO75909 pRNA.11-201ENST00000618423 90 ntBASIC16.88■□□□□ 0.29
CCNKO75909 pRNA.13-201ENST00000619112 90 ntBASIC16.88■□□□□ 0.29
CCNKO75909 EXOG-217ENST00000630638 197 ntTSL 5 BASIC16.88■□□□□ 0.29
CCNKO75909 DNAJA3-202ENST00000355296 2591 ntAPPRIS ALT1 TSL 1 (best) BASIC16.88■□□□□ 0.29
CCNKO75909 CEBPG-201ENST00000284000 4109 ntAPPRIS P1 TSL 1 (best) BASIC16.88■□□□□ 0.29
CCNKO75909 TRMT6-201ENST00000203001 2327 ntAPPRIS P1 TSL 1 (best) BASIC16.88■□□□□ 0.29
CCNKO75909 FRS3-201ENST00000259748 2094 ntAPPRIS P1 TSL 1 (best) BASIC16.88■□□□□ 0.29
CCNKO75909 MUTYH-203ENST00000372098 1839 ntTSL 1 (best) BASIC16.88■□□□□ 0.29
CCNKO75909 MUTYH-204ENST00000372104 1823 ntAPPRIS ALT2 TSL 1 (best) BASIC16.88■□□□□ 0.29
CCNKO75909 MUTYH-205ENST00000372110 1809 ntTSL 1 (best) BASIC16.88■□□□□ 0.29
CCNKO75909 PLEKHG4-205ENST00000450733 4480 ntAPPRIS ALT2 TSL 1 (best) BASIC16.88■□□□□ 0.29
CCNKO75909 PPP1R12C-202ENST00000435544 2363 ntTSL 2 BASIC16.88■□□□□ 0.29
CCNKO75909 YTHDF3-212ENST00000621413 2370 ntTSL 5 BASIC16.88■□□□□ 0.29
CCNKO75909 TADA1-201ENST00000367874 2159 ntAPPRIS P1 TSL 1 (best) BASIC16.88■□□□□ 0.29
CCNKO75909 OIP5-AS1-202ENST00000501665 1384 ntTSL 2 BASIC16.88■□□□□ 0.29
CCNKO75909 TLE2-219ENST00000591529 2483 ntTSL 1 (best) BASIC16.88■□□□□ 0.29
CCNKO75909 BCL2-202ENST00000398117 7461 ntAPPRIS P1 TSL 1 (best) BASIC16.88■□□□□ 0.29
Retrieved 100 of 98,524 protein–RNA pairs in 35.7 ms