Protein–RNA interactions for Protein: O60245

PCDH7, Protocadherin-7, humanhuman

Predictions only

Length 1,069 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PCDH7O60245 OSR2-202ENST00000435298 1736 ntTSL 1 (best) BASIC18.63■□□□□ 0.57
PCDH7O60245 PTPRE-201ENST00000254667 5331 ntAPPRIS P1 TSL 1 (best) BASIC18.63■□□□□ 0.57
PCDH7O60245 TMEM91-209ENST00000539627 1843 ntTSL 1 (best) BASIC18.63■□□□□ 0.57
PCDH7O60245 EFCAB11-202ENST00000538485 1870 ntTSL 2 BASIC18.63■□□□□ 0.57
PCDH7O60245 SYTL1-210ENST00000616558 1878 ntAPPRIS P1 TSL 1 (best) BASIC18.63■□□□□ 0.57
PCDH7O60245 BIRC2-206ENST00000530675 1927 ntTSL 2 BASIC18.62■□□□□ 0.57
PCDH7O60245 MIXL1-201ENST00000366810 2005 ntAPPRIS P1 TSL 1 (best) BASIC18.62■□□□□ 0.57
PCDH7O60245 CYGB-201ENST00000293230 2158 ntAPPRIS P1 TSL 1 (best) BASIC18.62■□□□□ 0.57
PCDH7O60245 SAMD11-213ENST00000618181 2179 ntAPPRIS ALT2 TSL 5 BASIC18.62■□□□□ 0.57
PCDH7O60245 BTD-202ENST00000383778 2261 ntAPPRIS ALT2 TSL 2 BASIC18.62■□□□□ 0.57
PCDH7O60245 ECE1-205ENST00000436918 2328 ntTSL 2 BASIC18.62■□□□□ 0.57
PCDH7O60245 PGM1-205ENST00000540265 2345 ntTSL 2 BASIC18.62■□□□□ 0.57
PCDH7O60245 TCIRG1-213ENST00000532635 2457 ntTSL 1 (best) BASIC18.62■□□□□ 0.57
PCDH7O60245 GTPBP3-222ENST00000600625 2493 ntTSL 1 (best) BASIC18.62■□□□□ 0.57
PCDH7O60245 FAM91A1-207ENST00000521166 2706 ntTSL 2 BASIC18.62■□□□□ 0.57
PCDH7O60245 EVC-201ENST00000264956 6431 ntAPPRIS P1 TSL 1 (best) BASIC18.62■□□□□ 0.57
PCDH7O60245 TJP1-208ENST00000495972 2890 ntTSL 1 (best) BASIC18.62■□□□□ 0.57
PCDH7O60245 MRAP-201ENST00000303645 935 ntAPPRIS P4 TSL 1 (best) BASIC18.62■□□□□ 0.57
PCDH7O60245 MRPS26-201ENST00000380325 1127 ntAPPRIS P1 TSL 1 (best) BASIC18.62■□□□□ 0.57
PCDH7O60245 TMEM218-207ENST00000528724 1117 ntTSL 5 BASIC18.62■□□□□ 0.57
PCDH7O60245 TMEM218-214ENST00000532156 954 ntTSL 1 (best) BASIC18.62■□□□□ 0.57
PCDH7O60245 PLEKHB1-216ENST00000543085 632 ntTSL 3 BASIC18.62■□□□□ 0.57
PCDH7O60245 RGMA-211ENST00000557420 989 ntTSL 3 BASIC18.62■□□□□ 0.57
PCDH7O60245 INO80E-214ENST00000620599 515 ntTSL 2 BASIC18.62■□□□□ 0.57
PCDH7O60245 RENBP-201ENST00000369997 1322 ntTSL 5 BASIC18.62■□□□□ 0.57
PCDH7O60245 LRRC29-209ENST00000629962 1303 ntAPPRIS P1 TSL 5 BASIC18.62■□□□□ 0.57
PCDH7O60245 SLC25A41-201ENST00000321510 1532 ntAPPRIS P1 TSL 5 BASIC18.62■□□□□ 0.57
PCDH7O60245 MARK2-203ENST00000377810 4560 ntAPPRIS ALT2 TSL 5 BASIC18.62■□□□□ 0.57
PCDH7O60245 SLC25A15-201ENST00000338625 1586 ntAPPRIS P1 TSL 1 (best) BASIC18.62■□□□□ 0.57
PCDH7O60245 SLC38A11-203ENST00000409149 1621 ntAPPRIS P2 TSL 2 BASIC18.62■□□□□ 0.57
PCDH7O60245 LDHAL6A-202ENST00000396213 1716 ntAPPRIS P1 TSL 1 (best) BASIC18.62■□□□□ 0.57
PCDH7O60245 NR1D2-201ENST00000312521 5258 ntAPPRIS P1 TSL 1 (best) BASIC18.62■□□□□ 0.57
PCDH7O60245 AC018445.3-201ENST00000624177 1945 ntBASIC18.62■□□□□ 0.57
PCDH7O60245 CHTOP-204ENST00000368694 2096 ntAPPRIS P3 TSL 1 (best) BASIC18.62■□□□□ 0.57
PCDH7O60245 FBLN7-202ENST00000331203 2301 ntAPPRIS P1 TSL 1 (best) BASIC18.62■□□□□ 0.57
PCDH7O60245 HIC1-201ENST00000322941 3053 ntAPPRIS P1 TSL 5 BASIC18.62■□□□□ 0.57
PCDH7O60245 GLS-202ENST00000338435 4475 ntAPPRIS ALT1 TSL 1 (best) BASIC18.62■□□□□ 0.57
PCDH7O60245 MACROD2-201ENST00000217246 4994 ntAPPRIS P1 TSL 2 BASIC18.61■□□□□ 0.57
PCDH7O60245 SMAD7-201ENST00000262158 3087 ntAPPRIS P3 TSL 1 (best) BASIC18.61■□□□□ 0.57
PCDH7O60245 IMPDH1-214ENST00000496200 2283 ntTSL 2 BASIC18.61■□□□□ 0.57
PCDH7O60245 ZNF582-207ENST00000619584 2297 ntAPPRIS P1 TSL 1 (best) BASIC18.61■□□□□ 0.57
PCDH7O60245 TMPRSS5-201ENST00000299882 2232 ntAPPRIS P3 TSL 1 (best) BASIC18.61■□□□□ 0.57
PCDH7O60245 PDZD3-203ENST00000525131 1882 ntTSL 2 BASIC18.61■□□□□ 0.57
PCDH7O60245 SARDH-201ENST00000298628 1484 ntTSL 1 (best) BASIC18.61■□□□□ 0.57
PCDH7O60245 GMPPA-213ENST00000622191 1473 ntTSL 5 BASIC18.61■□□□□ 0.57
PCDH7O60245 PYURF-201ENST00000273968 1361 ntAPPRIS P1 TSL 1 (best) BASIC18.61■□□□□ 0.57
PCDH7O60245 KATNAL2-208ENST00000592005 1348 ntTSL 1 (best) BASIC18.61■□□□□ 0.57
PCDH7O60245 LGI2-201ENST00000382114 6428 ntAPPRIS P1 TSL 1 (best) BASIC18.61■□□□□ 0.57
PCDH7O60245 CFC1-201ENST00000259216 1046 ntAPPRIS P1 TSL 1 (best) BASIC18.61■□□□□ 0.57
PCDH7O60245 CFC1B-201ENST00000281882 1071 ntAPPRIS P1 TSL 1 (best) BASIC18.61■□□□□ 0.57
PCDH7O60245 HLA-L-209ENST00000420110 1011 ntBASIC18.61■□□□□ 0.57
PCDH7O60245 ASMTL-AS1-203ENST00000425740 840 ntTSL 2 BASIC18.61■□□□□ 0.57
PCDH7O60245 COX4I1-202ENST00000561569 716 ntAPPRIS P1 TSL 2 BASIC18.61■□□□□ 0.57
PCDH7O60245 EML2-AS1-202ENST00000591087 838 ntTSL 3 BASIC18.61■□□□□ 0.57
PCDH7O60245 AC120498.8-201ENST00000614275 531 ntBASIC18.61■□□□□ 0.57
PCDH7O60245 MYH14-208ENST00000598205 6137 ntAPPRIS P3 TSL 5 BASIC18.61■□□□□ 0.57
PCDH7O60245 AUTS2-201ENST00000342771 6173 ntAPPRIS P3 TSL 1 (best) BASIC18.61■□□□□ 0.57
PCDH7O60245 LARGE2-208ENST00000531526 2528 ntAPPRIS P3 TSL 2 BASIC18.61■□□□□ 0.57
PCDH7O60245 SMPD3-201ENST00000219334 5453 ntAPPRIS P1 TSL 1 (best) BASIC18.61■□□□□ 0.57
PCDH7O60245 PRR14-203ENST00000542965 2316 ntAPPRIS P1 TSL 1 (best) BASIC18.61■□□□□ 0.57
PCDH7O60245 FMN2-201ENST00000319653 6434 ntAPPRIS P1 TSL 5 BASIC18.61■□□□□ 0.57
PCDH7O60245 LRP8-204ENST00000371454 3322 ntAPPRIS ALT2 TSL 1 (best) BASIC18.61■□□□□ 0.57
PCDH7O60245 KLHL2-201ENST00000226725 3134 ntAPPRIS P3 TSL 1 (best) BASIC18.6■□□□□ 0.57
PCDH7O60245 DBNL-210ENST00000448521 1808 ntAPPRIS ALT1 TSL 1 (best) BASIC18.6■□□□□ 0.57
PCDH7O60245 HOXB2-201ENST00000330070 1562 ntAPPRIS P1 TSL 1 (best) BASIC18.6■□□□□ 0.57
PCDH7O60245 PON1-201ENST00000222381 2568 ntAPPRIS P1 TSL 1 (best) BASIC18.6■□□□□ 0.57
PCDH7O60245 AP006587.1-201ENST00000534129 1502 ntBASIC18.6■□□□□ 0.57
PCDH7O60245 PTPA-204ENST00000355007 2515 ntTSL 5 BASIC18.6■□□□□ 0.57
PCDH7O60245 NAT16-204ENST00000455377 1492 ntAPPRIS P2 TSL 1 (best) BASIC18.6■□□□□ 0.57
PCDH7O60245 HEMK1-206ENST00000455834 1499 ntAPPRIS P1 TSL 5 BASIC18.6■□□□□ 0.57
PCDH7O60245 MYO15B-232ENST00000610510 9195 ntAPPRIS P1 TSL 5 BASIC18.6■□□□□ 0.57
PCDH7O60245 SOCS2-206ENST00000549122 2391 ntAPPRIS P1 TSL 1 (best) BASIC18.6■□□□□ 0.57
PCDH7O60245 PRAF2-202ENST00000553851 1334 ntAPPRIS P1 TSL 1 (best) BASIC18.6■□□□□ 0.57
PCDH7O60245 ANXA8L1-201ENST00000584982 2174 ntTSL 2 BASIC18.6■□□□□ 0.57
PCDH7O60245 STX18-201ENST00000306200 2138 ntAPPRIS P1 TSL 1 (best) BASIC18.6■□□□□ 0.57
PCDH7O60245 LIPT2-201ENST00000310109 1018 ntAPPRIS P1 TSL 2 BASIC18.6■□□□□ 0.57
PCDH7O60245 SDHC-201ENST00000342751 1127 ntTSL 1 (best) BASIC18.6■□□□□ 0.57
PCDH7O60245 MATN4-202ENST00000360607 2127 ntTSL 1 (best) BASIC18.6■□□□□ 0.57
PCDH7O60245 C2orf82-203ENST00000409533 561 ntAPPRIS P2 TSL 4 BASIC18.6■□□□□ 0.57
PCDH7O60245 LIMD2-206ENST00000578993 602 ntTSL 3 BASIC18.6■□□□□ 0.57
PCDH7O60245 CIRBP-213ENST00000587323 1092 ntTSL 5 BASIC18.6■□□□□ 0.57
PCDH7O60245 AC008687.6-201ENST00000596318 630 ntBASIC18.6■□□□□ 0.57
PCDH7O60245 SPHK2-211ENST00000600537 2136 ntAPPRIS ALT2 TSL 2 BASIC18.6■□□□□ 0.57
PCDH7O60245 CNOT6-201ENST00000261951 6176 ntAPPRIS P1 TSL 5 BASIC18.6■□□□□ 0.57
PCDH7O60245 KLF16-201ENST00000250916 2890 ntAPPRIS P1 TSL 1 (best) BASIC18.6■□□□□ 0.57
PCDH7O60245 ILDR2-203ENST00000469934 1950 ntAPPRIS ALT2 TSL 5 BASIC18.6■□□□□ 0.57
PCDH7O60245 FAM117B-201ENST00000392238 5763 ntAPPRIS P1 TSL 1 (best) BASIC18.6■□□□□ 0.57
PCDH7O60245 LRPPRC-202ENST00000409659 1610 ntTSL 5 BASIC18.6■□□□□ 0.57
PCDH7O60245 RFC2-202ENST00000352131 1576 ntTSL 1 (best) BASIC18.59■□□□□ 0.57
PCDH7O60245 NDUFV3-202ENST00000354250 1575 ntTSL 1 (best) BASIC18.59■□□□□ 0.57
PCDH7O60245 FAR2P2-204ENST00000424873 2070 ntTSL 2 BASIC18.59■□□□□ 0.57
PCDH7O60245 TACO1-201ENST00000258975 1469 ntAPPRIS P1 TSL 1 (best) BASIC18.59■□□□□ 0.57
PCDH7O60245 PDLIM2-205ENST00000397761 1491 ntAPPRIS P1 TSL 5 BASIC18.59■□□□□ 0.57
PCDH7O60245 ANKRD24-201ENST00000262970 3711 ntAPPRIS ALT2 TSL 5 BASIC18.59■□□□□ 0.57
PCDH7O60245 CCAR2-214ENST00000613179 1421 ntTSL 5 BASIC18.59■□□□□ 0.57
PCDH7O60245 STXBP6-203ENST00000419632 1970 ntAPPRIS P1 TSL 1 (best) BASIC18.59■□□□□ 0.57
PCDH7O60245 UMOD-203ENST00000396138 2399 ntAPPRIS ALT2 TSL 5 BASIC18.59■□□□□ 0.57
PCDH7O60245 MID2-201ENST00000262843 2876 ntTSL 1 (best) BASIC18.59■□□□□ 0.57
PCDH7O60245 IP6K1-204ENST00000468463 1815 ntTSL 5 BASIC18.59■□□□□ 0.57
PCDH7O60245 TNIK-208ENST00000465393 750 ntTSL 1 (best) BASIC18.59■□□□□ 0.57
Retrieved 100 of 98,524 protein–RNA pairs in 23.2 ms