Protein–RNA interactions for Protein: O43927

CXCL13, C-X-C motif chemokine 13, humanhuman

Predictions only

Length 109 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CXCL13O43927 RPS15-203ENST00000586096 570 ntTSL 2 BASIC17.5■□□□□ 0.39
CXCL13O43927 MRPL4-204ENST00000588502 827 ntTSL 2 BASIC17.5■□□□□ 0.39
CXCL13O43927 AP001412.1-201ENST00000608405 714 ntBASIC17.5■□□□□ 0.39
CXCL13O43927 AL049637.2-201ENST00000641778 930 ntBASIC17.5■□□□□ 0.39
CXCL13O43927 MARCH9-201ENST00000266643 2982 ntAPPRIS P1 TSL 1 (best) BASIC17.5■□□□□ 0.39
CXCL13O43927 FEZF1-202ENST00000427185 1368 ntTSL 1 (best) BASIC17.5■□□□□ 0.39
CXCL13O43927 AC073130.3-201ENST00000624389 2278 ntBASIC17.5■□□□□ 0.39
CXCL13O43927 LINC00511-201ENST00000453722 1716 ntTSL 2 BASIC17.5■□□□□ 0.39
CXCL13O43927 TNFRSF1A-201ENST00000162749 2223 ntAPPRIS P1 TSL 1 (best) BASIC17.49■□□□□ 0.39
CXCL13O43927 RTN4RL2-201ENST00000335099 2203 ntAPPRIS P1 TSL 1 (best) BASIC17.49■□□□□ 0.39
CXCL13O43927 KLC1-219ENST00000555836 2467 ntTSL 5 BASIC17.49■□□□□ 0.39
CXCL13O43927 P2RX3-204ENST00000616487 1346 ntTSL 5 BASIC17.49■□□□□ 0.39
CXCL13O43927 SGCE-207ENST00000447873 1597 ntTSL 1 (best) BASIC17.49■□□□□ 0.39
CXCL13O43927 ACOT2-204ENST00000613168 1553 ntAPPRIS P5 TSL 1 (best) BASIC17.49■□□□□ 0.39
CXCL13O43927 FAM110A-204ENST00000381941 1809 ntAPPRIS P1 TSL 1 (best) BASIC17.49■□□□□ 0.39
CXCL13O43927 CSPG5-203ENST00000456150 2089 ntTSL 1 (best) BASIC17.49■□□□□ 0.39
CXCL13O43927 TBL1Y-201ENST00000346432 2312 ntAPPRIS P1 TSL 1 (best) BASIC17.49■□□□□ 0.39
CXCL13O43927 EBF1-202ENST00000380654 2345 ntTSL 1 (best) BASIC17.49■□□□□ 0.39
CXCL13O43927 CDK13-202ENST00000340829 5066 ntAPPRIS ALT1 TSL 1 (best) BASIC17.49■□□□□ 0.39
CXCL13O43927 PIGH-201ENST00000216452 1420 ntAPPRIS P2 TSL 1 (best) BASIC17.49■□□□□ 0.39
CXCL13O43927 TWF2-203ENST00000499914 1440 ntTSL 5 BASIC17.49■□□□□ 0.39
CXCL13O43927 RAB34-204ENST00000395245 1766 ntAPPRIS P1 TSL 1 (best) BASIC17.49■□□□□ 0.39
CXCL13O43927 NPNT-214ENST00000514622 2362 ntTSL 2 BASIC17.49■□□□□ 0.39
CXCL13O43927 AC108693.2-201ENST00000492981 303 ntTSL 3 BASIC17.49■□□□□ 0.39
CXCL13O43927 PAIP2-208ENST00000511706 468 ntTSL 5 BASIC17.49■□□□□ 0.39
CXCL13O43927 MIXL1-202ENST00000542034 839 ntTSL 1 (best) BASIC17.49■□□□□ 0.39
CXCL13O43927 UBALD1-209ENST00000591897 1275 ntTSL 2 BASIC17.49■□□□□ 0.39
CXCL13O43927 NAB2-202ENST00000342556 2318 ntTSL 5 BASIC17.49■□□□□ 0.39
CXCL13O43927 SIMC1-203ENST00000429602 2694 ntAPPRIS ALT2 TSL 1 (best) BASIC17.49■□□□□ 0.39
CXCL13O43927 RBM34-201ENST00000408888 2054 ntAPPRIS P1 TSL 1 (best) BASIC17.49■□□□□ 0.39
CXCL13O43927 VSTM2B-201ENST00000335523 1488 ntAPPRIS P1 TSL 5 BASIC17.49■□□□□ 0.39
CXCL13O43927 BCS1L-201ENST00000359273 1454 ntAPPRIS P1 TSL 1 (best) BASIC17.49■□□□□ 0.39
CXCL13O43927 CYB561-204ENST00000448884 1496 ntTSL 2 BASIC17.49■□□□□ 0.39
CXCL13O43927 TMEM44-203ENST00000381975 2197 ntTSL 1 (best) BASIC17.49■□□□□ 0.39
CXCL13O43927 CBR1-205ENST00000530908 1924 ntTSL 1 (best) BASIC17.49■□□□□ 0.39
CXCL13O43927 ANKRD13D-216ENST00000514166 2138 ntTSL 2 BASIC17.48■□□□□ 0.39
CXCL13O43927 SH2B3-201ENST00000341259 5406 ntAPPRIS P1 TSL 1 (best) BASIC17.48■□□□□ 0.39
CXCL13O43927 APAF1-210ENST00000551964 5444 ntAPPRIS P4 TSL 1 (best) BASIC17.48■□□□□ 0.39
CXCL13O43927 KRT8P8-201ENST00000434750 1448 ntBASIC17.48■□□□□ 0.39
CXCL13O43927 GALNT13-201ENST00000392825 5536 ntAPPRIS P1 TSL 2 BASIC17.48■□□□□ 0.39
CXCL13O43927 DMPK-203ENST00000354227 1982 ntTSL 2 BASIC17.48■□□□□ 0.39
CXCL13O43927 PMF1-BGLAP-202ENST00000368276 852 ntTSL 3 BASIC17.48■□□□□ 0.39
CXCL13O43927 C1orf50-201ENST00000372525 996 ntAPPRIS P1 TSL 1 (best) BASIC17.48■□□□□ 0.39
CXCL13O43927 TCEAL6-202ENST00000372774 1106 ntAPPRIS P1 TSL 1 (best) BASIC17.48■□□□□ 0.39
CXCL13O43927 POMC-202ENST00000380794 1295 ntAPPRIS P1 TSL 2 BASIC17.48■□□□□ 0.39
CXCL13O43927 RHOG-202ENST00000396978 1066 ntAPPRIS P1 TSL 3 BASIC17.48■□□□□ 0.39
CXCL13O43927 AL596275.1-201ENST00000423464 877 ntBASIC17.48■□□□□ 0.39
CXCL13O43927 SAPCD2P4-201ENST00000424595 1171 ntBASIC17.48■□□□□ 0.39
CXCL13O43927 SNORA78-201ENST00000459373 127 ntBASIC17.48■□□□□ 0.39
CXCL13O43927 LINC00636-201ENST00000494231 1264 ntTSL 1 (best) BASIC17.48■□□□□ 0.39
CXCL13O43927 CXCL2-202ENST00000508487 1218 ntAPPRIS P1 TSL 1 (best) BASIC17.48■□□□□ 0.39
CXCL13O43927 ATP6V0E1-204ENST00000519911 718 ntTSL 2 BASIC17.48■□□□□ 0.39
CXCL13O43927 TESC-AS1-201ENST00000547006 1053 ntTSL 2 BASIC17.48■□□□□ 0.39
CXCL13O43927 AC113410.3-201ENST00000623366 203 ntBASIC17.48■□□□□ 0.39
CXCL13O43927 GPT-205ENST00000528431 1822 ntAPPRIS P1 TSL 1 (best) BASIC17.48■□□□□ 0.39
CXCL13O43927 TH-206ENST00000381178 1910 ntTSL 1 (best) BASIC17.48■□□□□ 0.39
CXCL13O43927 PIGQ-204ENST00000409527 1915 ntAPPRIS P1 TSL 2 BASIC17.48■□□□□ 0.39
CXCL13O43927 SAE1-201ENST00000270225 2049 ntAPPRIS P1 TSL 1 (best) BASIC17.48■□□□□ 0.39
CXCL13O43927 CPAMD8-202ENST00000388925 5355 ntTSL 5 BASIC17.48■□□□□ 0.39
CXCL13O43927 CASKIN1-201ENST00000343516 5759 ntAPPRIS P1 TSL 1 (best) BASIC17.48■□□□□ 0.39
CXCL13O43927 AP000679.1-202ENST00000319763 2081 ntTSL 1 (best) BASIC17.48■□□□□ 0.39
CXCL13O43927 DDRGK1-201ENST00000354488 1306 ntAPPRIS P1 TSL 1 (best) BASIC17.47■□□□□ 0.39
CXCL13O43927 KRTAP5-AS1-201ENST00000424148 2265 ntTSL 2 BASIC17.47■□□□□ 0.39
CXCL13O43927 HLA-G-201ENST00000360323 1427 ntAPPRIS P2 BASIC17.47■□□□□ 0.39
CXCL13O43927 SNX11-203ENST00000452859 1601 ntTSL 2 BASIC17.47■□□□□ 0.39
CXCL13O43927 EARS2-206ENST00000563232 1709 ntTSL 1 (best) BASIC17.47■□□□□ 0.39
CXCL13O43927 DBNL-210ENST00000448521 1808 ntAPPRIS ALT1 TSL 1 (best) BASIC17.47■□□□□ 0.39
CXCL13O43927 PODNL1-203ENST00000538371 1826 ntAPPRIS ALT2 TSL 2 BASIC17.47■□□□□ 0.39
CXCL13O43927 FAM20B-201ENST00000263733 5984 ntAPPRIS P1 TSL 1 (best) BASIC17.47■□□□□ 0.39
CXCL13O43927 FBXO27-201ENST00000292853 2330 ntAPPRIS P2 TSL 1 (best) BASIC17.47■□□□□ 0.39
CXCL13O43927 MED17-221ENST00000639724 2317 ntTSL 5 BASIC17.47■□□□□ 0.39
CXCL13O43927 TTC12-202ENST00000393020 2541 ntTSL 5 BASIC17.47■□□□□ 0.39
CXCL13O43927 METTL27-201ENST00000297873 941 ntAPPRIS P1 TSL 1 (best) BASIC17.47■□□□□ 0.39
CXCL13O43927 DNPH1-202ENST00000393987 796 ntTSL 2 BASIC17.47■□□□□ 0.39
CXCL13O43927 RALGPS1-206ENST00000394011 819 ntTSL 1 (best) BASIC17.47■□□□□ 0.39
CXCL13O43927 Z98884.1-201ENST00000451646 830 ntTSL 3 BASIC17.47■□□□□ 0.39
CXCL13O43927 EFTUD1P1-201ENST00000558187 596 ntTSL 4 BASIC17.47■□□□□ 0.39
CXCL13O43927 CYB561-214ENST00000582034 1193 ntTSL 2 BASIC17.47■□□□□ 0.39
CXCL13O43927 AC073195.1-201ENST00000607241 877 ntBASIC17.47■□□□□ 0.39
CXCL13O43927 AL353708.3-201ENST00000610272 989 ntBASIC17.47■□□□□ 0.39
CXCL13O43927 MAPK9-203ENST00000393360 4326 ntTSL 5 BASIC17.47■□□□□ 0.39
CXCL13O43927 EPHX1-201ENST00000272167 1660 ntAPPRIS P1 TSL 1 (best) BASIC17.47■□□□□ 0.39
CXCL13O43927 ACTR5-201ENST00000243903 2565 ntAPPRIS P1 TSL 1 (best) BASIC17.47■□□□□ 0.39
CXCL13O43927 KCTD13-207ENST00000568000 2528 ntAPPRIS P1 TSL 1 (best) BASIC17.47■□□□□ 0.39
CXCL13O43927 SNAPC2-201ENST00000221573 1542 ntAPPRIS P1 TSL 1 (best) BASIC17.47■□□□□ 0.39
CXCL13O43927 KLC1-208ENST00000452929 2453 ntTSL 5 BASIC17.46■□□□□ 0.39
CXCL13O43927 DBN1-210ENST00000512501 1878 ntTSL 3 BASIC17.46■□□□□ 0.39
CXCL13O43927 LHX8-202ENST00000356261 1764 ntAPPRIS ALT2 TSL 1 (best) BASIC17.46■□□□□ 0.39
CXCL13O43927 TMEM8A-204ENST00000431232 3691 ntAPPRIS P2 TSL 1 (best) BASIC17.46■□□□□ 0.39
CXCL13O43927 AMACR-206ENST00000502637 1598 ntTSL 5 BASIC17.46■□□□□ 0.39
CXCL13O43927 DPH1-201ENST00000263083 2221 ntAPPRIS P2 TSL 1 (best) BASIC17.46■□□□□ 0.39
CXCL13O43927 SSNA1-201ENST00000322310 896 ntAPPRIS P1 TSL 1 (best) BASIC17.46■□□□□ 0.39
CXCL13O43927 IMMP2L-201ENST00000331762 1205 ntAPPRIS P1 TSL 1 (best) BASIC17.46■□□□□ 0.39
CXCL13O43927 CCDC107-202ENST00000378406 1016 ntAPPRIS ALT2 TSL 2 BASIC17.46■□□□□ 0.39
CXCL13O43927 KCTD1-202ENST00000408011 2103 ntAPPRIS P1 TSL 1 (best) BASIC17.46■□□□□ 0.39
CXCL13O43927 NIFKP9-201ENST00000419265 221 ntBASIC17.46■□□□□ 0.39
CXCL13O43927 FAM197Y1-201ENST00000421178 764 ntBASIC17.46■□□□□ 0.39
CXCL13O43927 AL390728.5-201ENST00000428687 706 ntTSL 3 BASIC17.46■□□□□ 0.39
CXCL13O43927 C1orf52-203ENST00000471115 1219 ntAPPRIS P1 TSL 1 (best) BASIC17.46■□□□□ 0.39
CXCL13O43927 WDR86-AS1-203ENST00000480632 704 ntTSL 1 (best) BASIC17.46■□□□□ 0.39
Retrieved 100 of 98,524 protein–RNA pairs in 21.6 ms