Protein–RNA interactions for Protein: O43909

EXTL3, Exostosin-like 3, humanhuman

Predictions only

Length 919 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
EXTL3O43909 SMARCD2-212ENST00000613943 2342 ntTSL 5 BASIC21.21■□□□□ 0.99
EXTL3O43909 GLT1D1-204ENST00000442111 2995 ntAPPRIS P1 TSL 5 BASIC21.21■□□□□ 0.99
EXTL3O43909 DHRS3-204ENST00000616661 1722 ntAPPRIS P1 TSL 1 (best) BASIC21.21■□□□□ 0.99
EXTL3O43909 TPCN2-209ENST00000637504 2736 ntTSL 5 BASIC21.2■□□□□ 0.99
EXTL3O43909 BCAM-201ENST00000270233 2402 ntAPPRIS P1 TSL 1 (best) BASIC21.2■□□□□ 0.99
EXTL3O43909 HDAC1-201ENST00000373548 2124 ntAPPRIS P1 TSL 1 (best) BASIC21.2■□□□□ 0.98
EXTL3O43909 B4GALT1-202ENST00000535206 1535 ntTSL 1 (best) BASIC21.2■□□□□ 0.98
EXTL3O43909 LAYN-203ENST00000436913 2590 ntTSL 2 BASIC21.2■□□□□ 0.98
EXTL3O43909 ACADVL-203ENST00000356839 2323 ntAPPRIS P1 TSL 1 (best) BASIC21.2■□□□□ 0.98
EXTL3O43909 C11orf49-201ENST00000278460 1645 ntAPPRIS P3 TSL 1 (best) BASIC21.2■□□□□ 0.98
EXTL3O43909 SCO1-203ENST00000577427 1601 ntTSL 3 BASIC21.2■□□□□ 0.98
EXTL3O43909 RRAS-201ENST00000246792 1044 ntAPPRIS P1 TSL 1 (best) BASIC21.2■□□□□ 0.98
EXTL3O43909 PTPRCAP-201ENST00000326294 1292 ntAPPRIS P1 TSL 1 (best) BASIC21.2■□□□□ 0.98
EXTL3O43909 C6orf132-202ENST00000356542 894 ntAPPRIS ALT2 TSL 2 BASIC21.2■□□□□ 0.98
EXTL3O43909 VKORC1-204ENST00000394971 664 ntTSL 5 BASIC21.2■□□□□ 0.98
EXTL3O43909 DMRT2-206ENST00000412350 1244 ntTSL 1 (best) BASIC21.2■□□□□ 0.98
EXTL3O43909 SMIM19-201ENST00000414154 793 ntAPPRIS P1 TSL 1 (best) BASIC21.2■□□□□ 0.98
EXTL3O43909 PEX26-203ENST00000428061 815 ntTSL 1 (best) BASIC21.2■□□□□ 0.98
EXTL3O43909 LINC00636-201ENST00000494231 1264 ntTSL 1 (best) BASIC21.2■□□□□ 0.98
EXTL3O43909 UBE2K-204ENST00000503368 891 ntTSL 1 (best) BASIC21.2■□□□□ 0.98
EXTL3O43909 USP36-216ENST00000589424 970 ntTSL 5 BASIC21.2■□□□□ 0.98
EXTL3O43909 FLT3LG-211ENST00000600429 984 ntAPPRIS P1 TSL 1 (best) BASIC21.2■□□□□ 0.98
EXTL3O43909 FAM46B-201ENST00000289166 2368 ntAPPRIS P1 TSL 1 (best) BASIC21.2■□□□□ 0.98
EXTL3O43909 SH3GLB2-202ENST00000372559 1365 ntAPPRIS P1 TSL 1 (best) BASIC21.2■□□□□ 0.98
EXTL3O43909 MAFG-AS1-201ENST00000582106 1895 ntTSL 1 (best) BASIC21.2■□□□□ 0.98
EXTL3O43909 TOR1B-201ENST00000259339 2769 ntAPPRIS P1 TSL 1 (best) BASIC21.19■□□□□ 0.98
EXTL3O43909 SNAPC2-201ENST00000221573 1542 ntAPPRIS P1 TSL 1 (best) BASIC21.19■□□□□ 0.98
EXTL3O43909 POC1A-202ENST00000394970 1999 ntTSL 1 (best) BASIC21.19■□□□□ 0.98
EXTL3O43909 L2HGDH-203ENST00000421284 1958 ntAPPRIS P1 TSL 2 BASIC21.19■□□□□ 0.98
EXTL3O43909 NBL1-209ENST00000548815 1953 ntAPPRIS P3 TSL 3 BASIC21.19■□□□□ 0.98
EXTL3O43909 KXD1-203ENST00000540691 1592 ntAPPRIS P1 TSL 3 BASIC21.19■□□□□ 0.98
EXTL3O43909 CMTM8-201ENST00000307526 1174 ntAPPRIS P1 TSL 1 (best) BASIC21.19■□□□□ 0.98
EXTL3O43909 S100A14-203ENST00000368701 1080 ntAPPRIS P1 TSL 2 BASIC21.19■□□□□ 0.98
EXTL3O43909 C1orf50-201ENST00000372525 996 ntAPPRIS P1 TSL 1 (best) BASIC21.19■□□□□ 0.98
EXTL3O43909 CCDC107-202ENST00000378406 1016 ntAPPRIS ALT2 TSL 2 BASIC21.19■□□□□ 0.98
EXTL3O43909 PDCD2-202ENST00000392090 936 ntTSL 1 (best) BASIC21.19■□□□□ 0.98
EXTL3O43909 SGO1-AS1-202ENST00000448208 819 ntTSL 3 BASIC21.19■□□□□ 0.98
EXTL3O43909 RBCK1-213ENST00000475269 1200 ntTSL 1 (best) BASIC21.19■□□□□ 0.98
EXTL3O43909 AC090877.2-202ENST00000560363 574 ntTSL 2 BASIC21.19■□□□□ 0.98
EXTL3O43909 AC091551.1-201ENST00000590722 1228 ntAPPRIS P1 TSL 2 BASIC21.19■□□□□ 0.98
EXTL3O43909 RAC1-201ENST00000348035 2323 ntAPPRIS P1 TSL 1 (best) BASIC21.19■□□□□ 0.98
EXTL3O43909 IL17RC-203ENST00000403601 2388 ntAPPRIS ALT2 TSL 1 (best) BASIC21.19■□□□□ 0.98
EXTL3O43909 C20orf27-201ENST00000217195 1302 ntTSL 2 BASIC21.19■□□□□ 0.98
EXTL3O43909 MME-217ENST00000616757 1315 ntTSL 5 BASIC21.19■□□□□ 0.98
EXTL3O43909 WDR41-208ENST00000507029 1553 ntTSL 2 BASIC21.19■□□□□ 0.98
EXTL3O43909 DUSP15-209ENST00000486996 1651 ntTSL 2 BASIC21.18■□□□□ 0.98
EXTL3O43909 AC148477.3-202ENST00000376617 1766 ntTSL 2 BASIC21.18■□□□□ 0.98
EXTL3O43909 ACBD4-204ENST00000431281 2026 ntTSL 5 BASIC21.18■□□□□ 0.98
EXTL3O43909 GLI4-202ENST00000344692 1012 ntTSL 2 BASIC21.18■□□□□ 0.98
EXTL3O43909 AKNA-205ENST00000374079 2138 ntTSL 1 (best) BASIC21.18■□□□□ 0.98
EXTL3O43909 DNPH1-202ENST00000393987 796 ntTSL 2 BASIC21.18■□□□□ 0.98
EXTL3O43909 C1orf52-203ENST00000471115 1219 ntAPPRIS P1 TSL 1 (best) BASIC21.18■□□□□ 0.98
EXTL3O43909 AC019257.1-201ENST00000517676 557 ntTSL 5 BASIC21.18■□□□□ 0.98
EXTL3O43909 MIXL1-202ENST00000542034 839 ntTSL 1 (best) BASIC21.18■□□□□ 0.98
EXTL3O43909 TESC-AS1-201ENST00000547006 1053 ntTSL 2 BASIC21.18■□□□□ 0.98
EXTL3O43909 ANP32AP1-202ENST00000560832 1074 ntTSL 1 (best) BASIC21.18■□□□□ 0.98
EXTL3O43909 MRPL4-204ENST00000588502 827 ntTSL 2 BASIC21.18■□□□□ 0.98
EXTL3O43909 CEMP1-202ENST00000567119 1374 ntAPPRIS P2 BASIC21.18■□□□□ 0.98
EXTL3O43909 S1PR5-201ENST00000333430 2341 ntAPPRIS P1 TSL 1 (best) BASIC21.18■□□□□ 0.98
EXTL3O43909 TWF2-203ENST00000499914 1440 ntTSL 5 BASIC21.18■□□□□ 0.98
EXTL3O43909 SLC25A24-204ENST00000569674 2357 ntBASIC21.18■□□□□ 0.98
EXTL3O43909 C3orf18-203ENST00000426034 2486 ntAPPRIS P1 TSL 1 (best) BASIC21.18■□□□□ 0.98
EXTL3O43909 HOXD11-201ENST00000249504 1533 ntAPPRIS P1 TSL 3 BASIC21.18■□□□□ 0.98
EXTL3O43909 PVRIG-201ENST00000317271 1583 ntAPPRIS P1 TSL 1 (best) BASIC21.18■□□□□ 0.98
EXTL3O43909 AC008060.1-201ENST00000401499 1551 ntTSL 1 (best) BASIC21.18■□□□□ 0.98
EXTL3O43909 GPR162-201ENST00000311268 2768 ntAPPRIS P1 TSL 1 (best) BASIC21.18■□□□□ 0.98
EXTL3O43909 FGF17-201ENST00000359441 1714 ntAPPRIS P1 TSL 1 (best) BASIC21.18■□□□□ 0.98
EXTL3O43909 CRTC1-204ENST00000601916 1834 ntTSL 5 BASIC21.18■□□□□ 0.98
EXTL3O43909 PCDHA13-203ENST00000617769 2427 ntAPPRIS ALT2 BASIC21.17■□□□□ 0.98
EXTL3O43909 ST3GAL5-222ENST00000638572 4431 ntAPPRIS P2 TSL 1 (best) BASIC21.17■□□□□ 0.98
EXTL3O43909 PLEKHA8-203ENST00000396259 2840 ntTSL 2 BASIC21.17■□□□□ 0.98
EXTL3O43909 SYNGR1-201ENST00000216155 497 ntTSL 3 BASIC21.17■□□□□ 0.98
EXTL3O43909 DUSP15-205ENST00000398084 1256 ntTSL 5 BASIC21.17■□□□□ 0.98
EXTL3O43909 AL353807.1-201ENST00000427475 662 ntBASIC21.17■□□□□ 0.98
EXTL3O43909 C16orf90-202ENST00000437192 907 ntAPPRIS P1 TSL 5 BASIC21.17■□□□□ 0.98
EXTL3O43909 AL590666.2-201ENST00000448869 758 ntTSL 2 BASIC21.17■□□□□ 0.98
EXTL3O43909 MFSD4A-206ENST00000489709 1136 ntTSL 5 BASIC21.17■□□□□ 0.98
EXTL3O43909 AC008550.1-201ENST00000511500 884 ntBASIC21.17■□□□□ 0.98
EXTL3O43909 AL353708.3-201ENST00000610272 989 ntBASIC21.17■□□□□ 0.98
EXTL3O43909 FAM58A-204ENST00000576892 1306 ntAPPRIS ALT2 TSL 1 (best) BASIC21.17■□□□□ 0.98
EXTL3O43909 ACADS-202ENST00000411593 1398 ntTSL 2 BASIC21.17■□□□□ 0.98
EXTL3O43909 HMBS-214ENST00000542729 1469 ntTSL 2 BASIC21.17■□□□□ 0.98
EXTL3O43909 GMPPA-213ENST00000622191 1473 ntTSL 5 BASIC21.17■□□□□ 0.98
EXTL3O43909 SKP2-208ENST00000546211 1589 ntTSL 5 BASIC21.17■□□□□ 0.98
EXTL3O43909 GPR139-202ENST00000570682 1613 ntAPPRIS P1 TSL 1 (best) BASIC21.17■□□□□ 0.98
EXTL3O43909 RASD1-201ENST00000225688 1746 ntAPPRIS P1 TSL 1 (best) BASIC21.17■□□□□ 0.98
EXTL3O43909 TRABD2A-201ENST00000335459 1844 ntTSL 1 (best) BASIC21.17■□□□□ 0.98
EXTL3O43909 PUF60-202ENST00000349157 1821 ntAPPRIS ALT2 TSL 1 (best) BASIC21.17■□□□□ 0.98
EXTL3O43909 RDH13-203ENST00000415061 1871 ntAPPRIS P1 TSL 1 (best) BASIC21.17■□□□□ 0.98
EXTL3O43909 AKAP8L-201ENST00000397410 2146 ntAPPRIS P1 TSL 1 (best) BASIC21.17■□□□□ 0.98
EXTL3O43909 RBM6-204ENST00000422955 2324 ntTSL 2 BASIC21.17■□□□□ 0.98
EXTL3O43909 NFIL3-201ENST00000297689 2085 ntAPPRIS P1 TSL 1 (best) BASIC21.16■□□□□ 0.98
EXTL3O43909 ZNF326-202ENST00000361911 1538 ntTSL 1 (best) BASIC21.16■□□□□ 0.98
EXTL3O43909 AL135905.2-201ENST00000584934 1404 ntBASIC21.16■□□□□ 0.98
EXTL3O43909 P2RX3-204ENST00000616487 1346 ntTSL 5 BASIC21.16■□□□□ 0.98
EXTL3O43909 HAS3-201ENST00000219322 1163 ntTSL 1 (best) BASIC21.16■□□□□ 0.98
EXTL3O43909 LYPD1-201ENST00000345008 1033 ntTSL 1 (best) BASIC21.16■□□□□ 0.98
EXTL3O43909 PMF1-BGLAP-202ENST00000368276 852 ntTSL 3 BASIC21.16■□□□□ 0.98
EXTL3O43909 HOXD12-201ENST00000404162 841 ntTSL 1 (best) BASIC21.16■□□□□ 0.98
EXTL3O43909 SNX5-213ENST00000486039 602 ntTSL 1 (best) BASIC21.16■□□□□ 0.98
Retrieved 100 of 98,524 protein–RNA pairs in 23.8 ms