Protein–RNA interactions for Protein: O43159

RRP8, Ribosomal RNA-processing protein 8, humanhuman

Known RBP Predictions only

Length 456 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RRP8O43159 PPP3CC-201ENST00000240139 2189 ntAPPRIS P3 TSL 1 (best) BASIC18.35■□□□□ 0.53
RRP8O43159 PPP3CC-203ENST00000397775 2094 ntTSL 2 BASIC18.35■□□□□ 0.53
RRP8O43159 UBE2K-201ENST00000261427 5245 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
RRP8O43159 ARSA-205ENST00000453344 1650 ntTSL 2 BASIC18.35■□□□□ 0.53
RRP8O43159 ACSF3-202ENST00000378345 1541 ntTSL 1 (best) BASIC18.35■□□□□ 0.53
RRP8O43159 ALKBH6-213ENST00000486389 1525 ntTSL 3 BASIC18.35■□□□□ 0.53
RRP8O43159 HSPB2-C11orf52-202ENST00000534100 1521 ntAPPRIS ALT2 TSL 2 BASIC18.35■□□□□ 0.53
RRP8O43159 CENPB-201ENST00000379751 2840 ntAPPRIS P1 BASIC18.35■□□□□ 0.53
RRP8O43159 DGCR6L-201ENST00000248879 1154 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
RRP8O43159 CENPX-201ENST00000306704 751 ntTSL 1 (best) BASIC18.35■□□□□ 0.53
RRP8O43159 S100A16-203ENST00000368705 956 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
RRP8O43159 TMA7-201ENST00000438607 561 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
RRP8O43159 APBB3-216ENST00000511201 1014 ntTSL 5 BASIC18.35■□□□□ 0.53
RRP8O43159 PRSS44-201ENST00000515154 1146 ntBASIC18.35■□□□□ 0.53
RRP8O43159 PTK2-216ENST00000519881 863 ntTSL 3 BASIC18.35■□□□□ 0.53
RRP8O43159 ALKAL1-202ENST00000523939 536 ntAPPRIS ALT2 TSL 1 (best) BASIC18.35■□□□□ 0.53
RRP8O43159 AC127526.4-201ENST00000527970 983 ntTSL 3 BASIC18.35■□□□□ 0.53
RRP8O43159 REEP1-207ENST00000535845 1196 ntTSL 2 BASIC18.35■□□□□ 0.53
RRP8O43159 AL441883.1-201ENST00000566170 1045 ntBASIC18.35■□□□□ 0.53
RRP8O43159 AL353719.1-201ENST00000566847 864 ntBASIC18.35■□□□□ 0.53
RRP8O43159 CPEB1-218ENST00000620182 2422 ntTSL 2 BASIC18.35■□□□□ 0.53
RRP8O43159 TRIM15-210ENST00000619857 2217 ntTSL 5 BASIC18.35■□□□□ 0.53
RRP8O43159 TMEM125-201ENST00000432792 1850 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
RRP8O43159 PRMT2-210ENST00000458387 1874 ntTSL 1 (best) BASIC18.35■□□□□ 0.53
RRP8O43159 GRM6-201ENST00000231188 6143 ntAPPRIS P1 TSL 2 BASIC18.35■□□□□ 0.53
RRP8O43159 KCNMA1-209ENST00000372443 5059 ntAPPRIS ALT2 TSL 5 BASIC18.34■□□□□ 0.53
RRP8O43159 PARN-205ENST00000539279 1557 ntTSL 2 BASIC18.34■□□□□ 0.53
RRP8O43159 PAXIP1-AS1-201ENST00000608317 2256 ntBASIC18.34■□□□□ 0.53
RRP8O43159 GPSM1-206ENST00000616132 2270 ntTSL 1 (best) BASIC18.34■□□□□ 0.53
RRP8O43159 ICAM5-201ENST00000221980 3000 ntAPPRIS P1 TSL 1 (best) BASIC18.34■□□□□ 0.53
RRP8O43159 SLC17A7-201ENST00000221485 2973 ntAPPRIS P1 TSL 1 (best) BASIC18.34■□□□□ 0.53
RRP8O43159 RFLNA-201ENST00000324038 2148 ntAPPRIS P2 TSL 2 BASIC18.34■□□□□ 0.53
RRP8O43159 PGRMC2-201ENST00000296425 2767 ntAPPRIS P1 TSL 1 (best) BASIC18.34■□□□□ 0.53
RRP8O43159 MRPL43-205ENST00000370234 798 ntTSL 1 (best) BASIC18.34■□□□□ 0.53
RRP8O43159 PDLIM7-205ENST00000393551 1226 ntTSL 1 (best) BASIC18.34■□□□□ 0.53
RRP8O43159 TRPT1-203ENST00000394547 865 ntTSL 1 (best) BASIC18.34■□□□□ 0.53
RRP8O43159 SMYD3-204ENST00000403792 1209 ntTSL 1 (best) BASIC18.34■□□□□ 0.53
RRP8O43159 CCDC124-201ENST00000445755 938 ntAPPRIS P1 TSL 2 BASIC18.34■□□□□ 0.53
RRP8O43159 PSMB5-205ENST00000493471 1117 ntTSL 1 (best) BASIC18.34■□□□□ 0.53
RRP8O43159 CD81-212ENST00000526072 1172 ntTSL 5 BASIC18.34■□□□□ 0.53
RRP8O43159 TRMT112-203ENST00000535750 823 ntTSL 2 BASIC18.34■□□□□ 0.53
RRP8O43159 ZNF667-AS1-208ENST00000594783 475 ntTSL 3 BASIC18.34■□□□□ 0.53
RRP8O43159 CCDC124-203ENST00000597436 1055 ntAPPRIS P1 TSL 1 (best) BASIC18.34■□□□□ 0.53
RRP8O43159 TXNDC12-205ENST00000610127 806 ntTSL 2 BASIC18.34■□□□□ 0.53
RRP8O43159 SUSD3-205ENST00000617293 1076 ntAPPRIS ALT2 TSL 3 BASIC18.34■□□□□ 0.53
RRP8O43159 DTX3-208ENST00000551632 1840 ntAPPRIS ALT1 TSL 2 BASIC18.34■□□□□ 0.53
RRP8O43159 RNH1-203ENST00000397604 1722 ntAPPRIS P1 TSL 1 (best) BASIC18.34■□□□□ 0.53
RRP8O43159 PAQR6-212ENST00000540423 1729 ntTSL 3 BASIC18.34■□□□□ 0.53
RRP8O43159 HNRNPLL-206ENST00000410076 1687 ntTSL 1 (best) BASIC18.34■□□□□ 0.53
RRP8O43159 AL606970.3-201ENST00000446811 2246 ntTSL 2 BASIC18.34■□□□□ 0.53
RRP8O43159 FRMD3-204ENST00000376438 2198 ntTSL 2 BASIC18.34■□□□□ 0.53
RRP8O43159 ASNS-206ENST00000437628 1638 ntTSL 2 BASIC18.34■□□□□ 0.53
RRP8O43159 APBB1-210ENST00000530885 1626 ntTSL 2 BASIC18.34■□□□□ 0.53
RRP8O43159 CHST7-201ENST00000276055 2289 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.53
RRP8O43159 ZYG11B-202ENST00000545132 2294 ntTSL 2 BASIC18.33■□□□□ 0.53
RRP8O43159 PALM-208ENST00000592155 2272 ntTSL 4 BASIC18.33■□□□□ 0.53
RRP8O43159 CD1E-210ENST00000368165 1003 ntAPPRIS ALT2 TSL 1 (best) BASIC18.33■□□□□ 0.52
RRP8O43159 RPUSD3-201ENST00000383820 1225 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.52
RRP8O43159 HOXA9-202ENST00000396345 797 ntTSL 2 BASIC18.33■□□□□ 0.52
RRP8O43159 CD1E-214ENST00000452291 745 ntTSL 1 (best) BASIC18.33■□□□□ 0.52
RRP8O43159 AC008040.2-201ENST00000461049 708 ntBASIC18.33■□□□□ 0.52
RRP8O43159 LINC01024-205ENST00000521563 939 ntTSL 3 BASIC18.33■□□□□ 0.52
RRP8O43159 ADGRD1-AS1-202ENST00000542980 1277 ntTSL 4 BASIC18.33■□□□□ 0.52
RRP8O43159 GPALPP1-207ENST00000611650 899 ntBASIC18.33■□□□□ 0.52
RRP8O43159 SMN2-213ENST00000614240 804 ntAPPRIS ALT2 TSL 5 BASIC18.33■□□□□ 0.52
RRP8O43159 AL023803.3-201ENST00000615559 522 ntBASIC18.33■□□□□ 0.52
RRP8O43159 AC012313.10-201ENST00000623509 926 ntBASIC18.33■□□□□ 0.52
RRP8O43159 SPACA6-213ENST00000637797 1073 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.52
RRP8O43159 B4GALNT1-213ENST00000552350 1649 ntTSL 4 BASIC18.33■□□□□ 0.52
RRP8O43159 IRX4-206ENST00000513692 2391 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.52
RRP8O43159 SLC25A39-202ENST00000377095 1565 ntAPPRIS ALT1 TSL 1 (best) BASIC18.33■□□□□ 0.52
RRP8O43159 RAB34-203ENST00000395243 1597 ntTSL 1 (best) BASIC18.33■□□□□ 0.52
RRP8O43159 AC116351.2-201ENST00000606540 1585 ntBASIC18.33■□□□□ 0.52
RRP8O43159 SYNGR2-201ENST00000225777 2325 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.52
RRP8O43159 LY6K-201ENST00000292430 2671 ntAPPRIS P3 TSL 1 (best) BASIC18.33■□□□□ 0.52
RRP8O43159 THEM6-201ENST00000336138 2259 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.52
RRP8O43159 TCF7L1-201ENST00000282111 2968 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.52
RRP8O43159 BACE1-209ENST00000513780 1465 ntTSL 1 (best) BASIC18.33■□□□□ 0.52
RRP8O43159 EMD-202ENST00000369842 1379 ntAPPRIS P1 TSL 1 (best) BASIC18.32■□□□□ 0.52
RRP8O43159 EDEM1-204ENST00000445686 1363 ntTSL 2 BASIC18.32■□□□□ 0.52
RRP8O43159 ULK2-202ENST00000395544 6010 ntAPPRIS P1 TSL 1 (best) BASIC18.32■□□□□ 0.52
RRP8O43159 AKIRIN1-201ENST00000372984 1330 ntTSL 2 BASIC18.32■□□□□ 0.52
RRP8O43159 NTMT1-211ENST00000617943 1346 ntTSL 3 BASIC18.32■□□□□ 0.52
RRP8O43159 DECR2-202ENST00000424398 1012 ntTSL 5 BASIC18.32■□□□□ 0.52
RRP8O43159 TRIM73-203ENST00000437796 1169 ntAPPRIS P2 TSL 1 (best) BASIC18.32■□□□□ 0.52
RRP8O43159 AC005091.1-201ENST00000441955 1190 ntTSL 3 BASIC18.32■□□□□ 0.52
RRP8O43159 AC019068.1-202ENST00000483218 768 ntTSL 3 BASIC18.32■□□□□ 0.52
RRP8O43159 AC104596.1-202ENST00000507486 759 ntTSL 3 BASIC18.32■□□□□ 0.52
RRP8O43159 PRELID1P1-202ENST00000567272 903 ntBASIC18.32■□□□□ 0.52
RRP8O43159 SLF2-205ENST00000609386 891 ntAPPRIS ALT2 BASIC18.32■□□□□ 0.52
RRP8O43159 AC005224.2-201ENST00000571192 1885 ntTSL 2 BASIC18.32■□□□□ 0.52
RRP8O43159 NKX6-1-202ENST00000515820 2194 ntTSL 3 BASIC18.32■□□□□ 0.52
RRP8O43159 DYM-203ENST00000442713 2147 ntTSL 2 BASIC18.32■□□□□ 0.52
RRP8O43159 ATP6AP1-201ENST00000369762 2099 ntAPPRIS P1 TSL 1 (best) BASIC18.32■□□□□ 0.52
RRP8O43159 SPAG4-201ENST00000374273 1453 ntAPPRIS P1 TSL 1 (best) BASIC18.32■□□□□ 0.52
RRP8O43159 FAM3A-202ENST00000359889 1712 ntAPPRIS P1 TSL 2 BASIC18.32■□□□□ 0.52
RRP8O43159 CYP2D6-201ENST00000359033 1433 ntTSL 1 (best) BASIC18.32■□□□□ 0.52
RRP8O43159 ZNF510-203ENST00000375231 5616 ntAPPRIS P1 TSL 1 (best) BASIC18.31■□□□□ 0.52
RRP8O43159 FAM131C-201ENST00000375662 1695 ntAPPRIS P1 TSL 1 (best) BASIC18.31■□□□□ 0.52
RRP8O43159 FLCN-203ENST00000389169 1692 ntTSL 1 (best) BASIC18.31■□□□□ 0.52
Retrieved 100 of 98,524 protein–RNA pairs in 46.2 ms