Protein–RNA interactions for Protein: H3BUS1

SYS1-DBNDD2, SYS1-DBNDD2 readthrough (NMD candidate), humanhuman

Predictions only

Length 97 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SYS1-DBNDD2H3BUS1 TMUB1-201ENST00000297533 1353 ntAPPRIS P1 TSL 1 (best) BASIC14.04□□□□□ -0.16
SYS1-DBNDD2H3BUS1 MAP3K6-201ENST00000357582 4136 ntAPPRIS P1 TSL 1 (best) BASIC14.04□□□□□ -0.16
SYS1-DBNDD2H3BUS1 HAUS7-202ENST00000370211 1363 ntAPPRIS P2 TSL 1 (best) BASIC14.04□□□□□ -0.16
SYS1-DBNDD2H3BUS1 PPAN-P2RY11-201ENST00000393796 2385 ntAPPRIS P1 TSL 1 (best) BASIC14.04□□□□□ -0.16
SYS1-DBNDD2H3BUS1 INPP4A-205ENST00000409851 3365 ntTSL 1 (best) BASIC14.04□□□□□ -0.16
SYS1-DBNDD2H3BUS1 CEP83-AS1-201ENST00000623122 2482 ntBASIC14.04□□□□□ -0.16
SYS1-DBNDD2H3BUS1 ZNF22-201ENST00000298299 2551 ntAPPRIS P1 TSL 1 (best) BASIC14.04□□□□□ -0.16
SYS1-DBNDD2H3BUS1 CEP78-204ENST00000415759 2623 ntAPPRIS ALT2 TSL 5 BASIC14.04□□□□□ -0.16
SYS1-DBNDD2H3BUS1 GAS8-202ENST00000536122 1687 ntTSL 2 BASIC14.04□□□□□ -0.16
SYS1-DBNDD2H3BUS1 NDUFS7-210ENST00000539480 1743 ntTSL 2 BASIC14.04□□□□□ -0.16
SYS1-DBNDD2H3BUS1 SLC10A3-202ENST00000369649 1763 ntAPPRIS ALT2 TSL 1 (best) BASIC14.04□□□□□ -0.16
SYS1-DBNDD2H3BUS1 CDK16-223ENST00000622098 2968 ntTSL 2 BASIC14.04□□□□□ -0.16
SYS1-DBNDD2H3BUS1 TMEM183A-201ENST00000367242 3019 ntAPPRIS P1 TSL 1 (best) BASIC14.04□□□□□ -0.16
SYS1-DBNDD2H3BUS1 TBXA2R-204ENST00000589966 1814 ntTSL 1 (best) BASIC14.04□□□□□ -0.16
SYS1-DBNDD2H3BUS1 TAPBP-233ENST00000426633 1888 ntAPPRIS P4 TSL 1 (best) BASIC14.04□□□□□ -0.16
SYS1-DBNDD2H3BUS1 SLC47A1-202ENST00000395585 1998 ntTSL 1 (best) BASIC14.03□□□□□ -0.16
SYS1-DBNDD2H3BUS1 ZBP1-202ENST00000395822 2073 ntTSL 2 BASIC14.03□□□□□ -0.16
SYS1-DBNDD2H3BUS1 BAIAP2L2-202ENST00000381669 2146 ntAPPRIS P2 TSL 1 (best) BASIC14.03□□□□□ -0.16
SYS1-DBNDD2H3BUS1 PPP1R16A-202ENST00000435887 2273 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
SYS1-DBNDD2H3BUS1 ZNF584-209ENST00000599238 2288 ntTSL 1 (best) BASIC14.03□□□□□ -0.16
SYS1-DBNDD2H3BUS1 FBXL15-201ENST00000224862 2362 ntAPPRIS P2 TSL 1 (best) BASIC14.03□□□□□ -0.16
SYS1-DBNDD2H3BUS1 MTMR14-203ENST00000353332 2368 ntAPPRIS ALT2 TSL 1 (best) BASIC14.03□□□□□ -0.16
SYS1-DBNDD2H3BUS1 REPS1-202ENST00000367663 2607 ntAPPRIS ALT1 TSL 5 BASIC14.03□□□□□ -0.16
SYS1-DBNDD2H3BUS1 UBL3-201ENST00000380680 4384 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
SYS1-DBNDD2H3BUS1 PRKCD-201ENST00000330452 2680 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
SYS1-DBNDD2H3BUS1 SYTL3-203ENST00000367081 2692 ntAPPRIS P3 TSL 5 BASIC14.03□□□□□ -0.16
SYS1-DBNDD2H3BUS1 SCUBE2-202ENST00000450649 2912 ntTSL 1 (best) BASIC14.03□□□□□ -0.16
SYS1-DBNDD2H3BUS1 GCH1-204ENST00000491895 2943 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
SYS1-DBNDD2H3BUS1 FAM214B-206ENST00000603301 3256 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
SYS1-DBNDD2H3BUS1 PGRMC2-207ENST00000520121 3785 ntTSL 1 (best) BASIC14.03□□□□□ -0.16
SYS1-DBNDD2H3BUS1 SMCHD1-201ENST00000320876 8821 ntAPPRIS P1 TSL 5 BASIC14.03□□□□□ -0.16
SYS1-DBNDD2H3BUS1 RNF208-201ENST00000391553 1077 ntAPPRIS P1 BASIC14.03□□□□□ -0.16
SYS1-DBNDD2H3BUS1 ZFAND2B-206ENST00000409336 944 ntAPPRIS P1 TSL 5 BASIC14.03□□□□□ -0.16
SYS1-DBNDD2H3BUS1 PRELID1-203ENST00000503216 1171 ntTSL 1 (best) BASIC14.03□□□□□ -0.16
SYS1-DBNDD2H3BUS1 ZFAND2B-221ENST00000621130 1070 ntTSL 5 BASIC14.03□□□□□ -0.16
SYS1-DBNDD2H3BUS1 AC138649.1-201ENST00000619611 1449 ntTSL 1 (best) BASIC14.03□□□□□ -0.16
SYS1-DBNDD2H3BUS1 RTCA-201ENST00000260563 1534 ntTSL 1 (best) BASIC14.03□□□□□ -0.16
SYS1-DBNDD2H3BUS1 YBX1-201ENST00000321358 1514 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
SYS1-DBNDD2H3BUS1 TP53I3-202ENST00000335934 1635 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
SYS1-DBNDD2H3BUS1 RUVBL2-211ENST00000601968 1641 ntTSL 5 BASIC14.03□□□□□ -0.16
SYS1-DBNDD2H3BUS1 ZNF821-221ENST00000611294 1833 ntTSL 3 BASIC14.03□□□□□ -0.16
SYS1-DBNDD2H3BUS1 C8orf58-207ENST00000615223 1848 ntAPPRIS ALT2 TSL 5 BASIC14.03□□□□□ -0.16
SYS1-DBNDD2H3BUS1 APTR-204ENST00000440088 2029 ntTSL 1 (best) BASIC14.03□□□□□ -0.16
SYS1-DBNDD2H3BUS1 DYNC1I1-211ENST00000537881 2146 ntTSL 5 BASIC14.03□□□□□ -0.16
SYS1-DBNDD2H3BUS1 NBL1-210ENST00000615215 2160 ntAPPRIS ALT2 TSL 1 (best) BASIC14.03□□□□□ -0.16
SYS1-DBNDD2H3BUS1 CASC2-205ENST00000454781 2216 ntTSL 1 (best) BASIC14.03□□□□□ -0.16
SYS1-DBNDD2H3BUS1 CADM3-201ENST00000368124 2546 ntAPPRIS P3 TSL 1 (best) BASIC14.03□□□□□ -0.16
SYS1-DBNDD2H3BUS1 CD248-201ENST00000311330 2558 ntAPPRIS P1 BASIC14.03□□□□□ -0.16
SYS1-DBNDD2H3BUS1 HDAC10-201ENST00000216271 2687 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
SYS1-DBNDD2H3BUS1 TXNRD3-203ENST00000524230 2950 ntAPPRIS ALT2 TSL 1 (best) BASIC14.03□□□□□ -0.16
SYS1-DBNDD2H3BUS1 RND2-202ENST00000587250 4147 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
SYS1-DBNDD2H3BUS1 CCDC177-201ENST00000599174 4131 ntAPPRIS P1 TSL 3 BASIC14.03□□□□□ -0.16
SYS1-DBNDD2H3BUS1 NR2F1-201ENST00000327111 3732 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.16
SYS1-DBNDD2H3BUS1 XXYLT1-201ENST00000310380 2727 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.16
SYS1-DBNDD2H3BUS1 ARPC4-201ENST00000397261 2582 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.16
SYS1-DBNDD2H3BUS1 SCYL1-203ENST00000420247 2583 ntTSL 1 (best) BASIC14.02□□□□□ -0.16
SYS1-DBNDD2H3BUS1 EPB41L2-211ENST00000525271 2568 ntTSL 2 BASIC14.02□□□□□ -0.16
SYS1-DBNDD2H3BUS1 IKBKG-207ENST00000611071 2103 ntAPPRIS P3 TSL 1 (best) BASIC14.02□□□□□ -0.16
SYS1-DBNDD2H3BUS1 ESPNP-201ENST00000270691 2015 ntBASIC14.02□□□□□ -0.16
SYS1-DBNDD2H3BUS1 AC005498.3-201ENST00000596587 2045 ntTSL 1 (best) BASIC14.02□□□□□ -0.16
SYS1-DBNDD2H3BUS1 C3orf33-201ENST00000340171 1884 ntTSL 1 (best) BASIC14.02□□□□□ -0.16
SYS1-DBNDD2H3BUS1 ESPN-205ENST00000461727 1869 ntTSL 1 (best) BASIC14.02□□□□□ -0.16
SYS1-DBNDD2H3BUS1 DBNL-210ENST00000448521 1808 ntAPPRIS ALT1 TSL 1 (best) BASIC14.02□□□□□ -0.16
SYS1-DBNDD2H3BUS1 PML-204ENST00000359928 1726 ntTSL 1 (best) BASIC14.02□□□□□ -0.16
SYS1-DBNDD2H3BUS1 B3GALNT1-212ENST00000488170 1660 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.16
SYS1-DBNDD2H3BUS1 LEF1-AS1-207ENST00000512637 1675 ntTSL 1 (best) BASIC14.02□□□□□ -0.16
SYS1-DBNDD2H3BUS1 GNA13-201ENST00000439174 4922 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.16
SYS1-DBNDD2H3BUS1 C11orf49-201ENST00000278460 1645 ntAPPRIS P3 TSL 1 (best) BASIC14.02□□□□□ -0.16
SYS1-DBNDD2H3BUS1 ZFAND2B-201ENST00000289528 1314 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.17
SYS1-DBNDD2H3BUS1 PCDHA5-202ENST00000529859 5218 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.17
SYS1-DBNDD2H3BUS1 KLHL22-201ENST00000328879 2616 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.17
SYS1-DBNDD2H3BUS1 KMT2E-207ENST00000476671 2523 ntTSL 1 (best) BASIC14.02□□□□□ -0.17
SYS1-DBNDD2H3BUS1 SH2D3C-213ENST00000629203 2478 ntTSL 2 BASIC14.02□□□□□ -0.17
SYS1-DBNDD2H3BUS1 ST6GALNAC6-201ENST00000291839 2280 ntAPPRIS P3 TSL 1 (best) BASIC14.02□□□□□ -0.17
SYS1-DBNDD2H3BUS1 AMFR-201ENST00000290649 3600 ntAPPRIS P2 TSL 1 (best) BASIC14.02□□□□□ -0.17
SYS1-DBNDD2H3BUS1 PODXL2-201ENST00000342480 2186 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.17
SYS1-DBNDD2H3BUS1 SLC39A7-201ENST00000374675 2153 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.17
SYS1-DBNDD2H3BUS1 ANKRD13D-216ENST00000514166 2138 ntTSL 2 BASIC14.02□□□□□ -0.17
SYS1-DBNDD2H3BUS1 BRD2-201ENST00000374825 4894 ntAPPRIS P3 TSL 1 (best) BASIC14.02□□□□□ -0.17
SYS1-DBNDD2H3BUS1 AC008764.6-201ENST00000595909 2069 ntBASIC14.02□□□□□ -0.17
SYS1-DBNDD2H3BUS1 WIPF1-202ENST00000359761 2003 ntAPPRIS P2 TSL 1 (best) BASIC14.02□□□□□ -0.17
SYS1-DBNDD2H3BUS1 BEND4-202ENST00000504360 8692 ntTSL 1 (best) BASIC14.02□□□□□ -0.17
SYS1-DBNDD2H3BUS1 RHOF-201ENST00000267205 3009 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
SYS1-DBNDD2H3BUS1 SPART-209ENST00000494062 3018 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
SYS1-DBNDD2H3BUS1 LINC01168-201ENST00000461291 5254 ntTSL 2 BASIC14.01□□□□□ -0.17
SYS1-DBNDD2H3BUS1 LAD1-202ENST00000391967 2906 ntTSL 1 (best) BASIC14.01□□□□□ -0.17
SYS1-DBNDD2H3BUS1 SNUPN-201ENST00000308588 1513 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
SYS1-DBNDD2H3BUS1 DUSP4-201ENST00000240100 5537 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
SYS1-DBNDD2H3BUS1 AP004607.4-201ENST00000530158 1459 ntBASIC14.01□□□□□ -0.17
SYS1-DBNDD2H3BUS1 PRR18-201ENST00000322583 3084 ntAPPRIS P2 BASIC14.01□□□□□ -0.17
SYS1-DBNDD2H3BUS1 AMIGO2-202ENST00000429635 3058 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
SYS1-DBNDD2H3BUS1 NRBP1-204ENST00000379863 2174 ntTSL 5 BASIC14.01□□□□□ -0.17
SYS1-DBNDD2H3BUS1 MARC2-202ENST00000366913 2134 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
SYS1-DBNDD2H3BUS1 LINC00896-202ENST00000609602 2128 ntBASIC14.01□□□□□ -0.17
SYS1-DBNDD2H3BUS1 C15orf56-202ENST00000623360 2129 ntTSL 2 BASIC14.01□□□□□ -0.17
SYS1-DBNDD2H3BUS1 B4GAT1-201ENST00000311181 2072 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
SYS1-DBNDD2H3BUS1 CTNNBL1-204ENST00000405275 2076 ntTSL 5 BASIC14.01□□□□□ -0.17
SYS1-DBNDD2H3BUS1 TRAM1-201ENST00000262213 2785 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
SYS1-DBNDD2H3BUS1 PANX1-202ENST00000436171 2750 ntAPPRIS ALT1 TSL 1 (best) BASIC14.01□□□□□ -0.17
SYS1-DBNDD2H3BUS1 KIAA1456-201ENST00000400069 1982 ntTSL 2 BASIC14.01□□□□□ -0.17
Retrieved 100 of 98,524 protein–RNA pairs in 25.7 ms