Protein–RNA interactions for Protein: A6NKN8

PCP4L1, Purkinje cell protein 4-like protein 1, humanhuman

Predictions only

Length 68 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PCP4L1A6NKN8 AC090164.3-201ENST00000610780 2143 ntBASIC15.34■□□□□ 0.05
PCP4L1A6NKN8 PTK6-202ENST00000542869 2931 ntAPPRIS P1 TSL 1 (best) BASIC15.33■□□□□ 0.05
PCP4L1A6NKN8 AL391650.1-201ENST00000448923 1468 ntAPPRIS P1 TSL 2 BASIC15.33■□□□□ 0.05
PCP4L1A6NKN8 LINC00639-201ENST00000553932 4496 ntTSL 2 BASIC15.33■□□□□ 0.05
PCP4L1A6NKN8 TRIM72-202ENST00000613872 1573 ntTSL 1 (best) BASIC15.33■□□□□ 0.05
PCP4L1A6NKN8 ALDOC-201ENST00000226253 1982 ntAPPRIS P1 TSL 1 (best) BASIC15.33■□□□□ 0.05
PCP4L1A6NKN8 ZBTB32-201ENST00000262630 1960 ntAPPRIS P1 TSL 1 (best) BASIC15.33■□□□□ 0.05
PCP4L1A6NKN8 NKAIN3-202ENST00000523211 1988 ntAPPRIS P1 TSL 2 BASIC15.33■□□□□ 0.05
PCP4L1A6NKN8 HSPA4-205ENST00000617074 2358 ntTSL 5 BASIC15.33■□□□□ 0.04
PCP4L1A6NKN8 SYBU-230ENST00000532779 2765 ntAPPRIS ALT2 TSL 2 BASIC15.33■□□□□ 0.04
PCP4L1A6NKN8 CDK11A-203ENST00000357760 2446 ntAPPRIS ALT1 TSL 1 (best) BASIC15.33■□□□□ 0.04
PCP4L1A6NKN8 CDK11A-204ENST00000358779 2419 ntAPPRIS ALT1 TSL 1 (best) BASIC15.33■□□□□ 0.04
PCP4L1A6NKN8 USP49-202ENST00000373010 2446 ntTSL 5 BASIC15.33■□□□□ 0.04
PCP4L1A6NKN8 CDK11A-206ENST00000378638 2429 ntTSL 5 BASIC15.33■□□□□ 0.04
PCP4L1A6NKN8 CDK11A-208ENST00000404249 2449 ntAPPRIS P4 TSL 1 (best) BASIC15.33■□□□□ 0.04
PCP4L1A6NKN8 MMD2-202ENST00000404774 2415 ntTSL 1 (best) BASIC15.33■□□□□ 0.04
PCP4L1A6NKN8 IL4I1-204ENST00000595948 2407 ntAPPRIS P4 TSL 1 (best) BASIC15.33■□□□□ 0.04
PCP4L1A6NKN8 ANTXR1-201ENST00000303714 5859 ntAPPRIS P1 TSL 1 (best) BASIC15.33■□□□□ 0.04
PCP4L1A6NKN8 SLITRK4-201ENST00000338017 3357 ntAPPRIS P1 TSL 1 (best) BASIC15.33■□□□□ 0.04
PCP4L1A6NKN8 GTPBP3-201ENST00000324894 2579 ntAPPRIS ALT2 TSL 1 (best) BASIC15.33■□□□□ 0.04
PCP4L1A6NKN8 ANKRD26-201ENST00000376087 6591 ntAPPRIS P2 TSL 5 BASIC15.33■□□□□ 0.04
PCP4L1A6NKN8 ABHD15-201ENST00000307201 3592 ntAPPRIS P1 TSL 1 (best) BASIC15.33■□□□□ 0.04
PCP4L1A6NKN8 TLE2-217ENST00000590536 2344 ntAPPRIS ALT2 TSL 1 (best) BASIC15.33■□□□□ 0.04
PCP4L1A6NKN8 MTHFD2L-203ENST00000395759 2354 ntAPPRIS P2 TSL 5 BASIC15.33■□□□□ 0.04
PCP4L1A6NKN8 MAP7-207ENST00000616617 4326 ntAPPRIS ALT2 TSL 5 BASIC15.33■□□□□ 0.04
PCP4L1A6NKN8 CXorf40A-209ENST00000441248 2411 ntAPPRIS P3 TSL 1 (best) BASIC15.33■□□□□ 0.04
PCP4L1A6NKN8 HES6-201ENST00000272937 1454 ntAPPRIS P3 TSL 1 (best) BASIC15.33■□□□□ 0.04
PCP4L1A6NKN8 HIPK4-201ENST00000291823 2452 ntAPPRIS P1 TSL 1 (best) BASIC15.33■□□□□ 0.04
PCP4L1A6NKN8 HNF1A-216ENST00000617366 2473 ntTSL 1 (best) BASIC15.33■□□□□ 0.04
PCP4L1A6NKN8 GRAMD2B-218ENST00000542322 2977 ntTSL 2 BASIC15.33■□□□□ 0.04
PCP4L1A6NKN8 SLC29A1-206ENST00000371755 2112 ntAPPRIS P1 TSL 1 (best) BASIC15.32■□□□□ 0.04
PCP4L1A6NKN8 ACIN1-205ENST00000457657 4815 ntAPPRIS ALT2 TSL 5 BASIC15.32■□□□□ 0.04
PCP4L1A6NKN8 MAP3K8-207ENST00000542547 2782 ntAPPRIS P1 TSL 1 (best) BASIC15.32■□□□□ 0.04
PCP4L1A6NKN8 NSD3-201ENST00000316985 3995 ntTSL 1 (best) BASIC15.32■□□□□ 0.04
PCP4L1A6NKN8 SLC47A2-201ENST00000325411 2258 ntAPPRIS P3 TSL 1 (best) BASIC15.32■□□□□ 0.04
PCP4L1A6NKN8 VOPP1-207ENST00000428648 2866 ntTSL 2 BASIC15.32■□□□□ 0.04
PCP4L1A6NKN8 ELAVL3-201ENST00000359227 4729 ntAPPRIS P3 TSL 3 BASIC15.32■□□□□ 0.04
PCP4L1A6NKN8 NUDT16-203ENST00000537561 5943 ntTSL 5 BASIC15.32■□□□□ 0.04
PCP4L1A6NKN8 MPIG6B-204ENST00000375809 2396 ntAPPRIS ALT2 TSL 1 (best) BASIC15.32■□□□□ 0.04
PCP4L1A6NKN8 SHTN1-202ENST00000355371 5361 ntAPPRIS ALT1 TSL 2 BASIC15.32■□□□□ 0.04
PCP4L1A6NKN8 C6orf201-202ENST00000380175 1834 ntAPPRIS P1 TSL 1 (best) BASIC15.32■□□□□ 0.04
PCP4L1A6NKN8 ACSS2-202ENST00000360596 3065 ntAPPRIS P1 TSL 1 (best) BASIC15.32■□□□□ 0.04
PCP4L1A6NKN8 SYBU-207ENST00000433638 3104 ntAPPRIS ALT2 TSL 5 BASIC15.32■□□□□ 0.04
PCP4L1A6NKN8 SYT5-201ENST00000354308 3792 ntAPPRIS P1 TSL 1 (best) BASIC15.32■□□□□ 0.04
PCP4L1A6NKN8 INO80B-201ENST00000233331 1261 ntAPPRIS P1 TSL 1 (best) BASIC15.32■□□□□ 0.04
PCP4L1A6NKN8 AL139393.1-201ENST00000417479 573 ntTSL 5 BASIC15.32■□□□□ 0.04
PCP4L1A6NKN8 VIPR2-201ENST00000262178 3944 ntAPPRIS P2 TSL 1 (best) BASIC15.32■□□□□ 0.04
PCP4L1A6NKN8 EPHA2-201ENST00000358432 3964 ntAPPRIS P1 TSL 1 (best) BASIC15.32■□□□□ 0.04
PCP4L1A6NKN8 ZNF511-201ENST00000359035 2004 ntTSL 2 BASIC15.32■□□□□ 0.04
PCP4L1A6NKN8 EGR2-203ENST00000439032 2844 ntAPPRIS P1 TSL 1 (best) BASIC15.32■□□□□ 0.04
PCP4L1A6NKN8 LENG8-209ENST00000616932 2825 ntAPPRIS ALT2 TSL 5 BASIC15.32■□□□□ 0.04
PCP4L1A6NKN8 RUNDC1-201ENST00000361677 3828 ntAPPRIS P1 TSL 1 (best) BASIC15.32■□□□□ 0.04
PCP4L1A6NKN8 C14orf80-203ENST00000354560 1553 ntAPPRIS ALT2 TSL 1 (best) BASIC15.32■□□□□ 0.04
PCP4L1A6NKN8 B3GAT3-201ENST00000265471 1641 ntAPPRIS P1 TSL 1 (best) BASIC15.32■□□□□ 0.04
PCP4L1A6NKN8 MON1A-203ENST00000455683 1617 ntAPPRIS ALT2 TSL 1 (best) BASIC15.32■□□□□ 0.04
PCP4L1A6NKN8 ECE1-203ENST00000374893 2484 ntTSL 1 (best) BASIC15.32■□□□□ 0.04
PCP4L1A6NKN8 DNAJC14-203ENST00000357606 3416 ntAPPRIS P1 TSL 5 BASIC15.31■□□□□ 0.04
PCP4L1A6NKN8 NEURL3-201ENST00000310865 1710 ntTSL 1 (best) BASIC15.31■□□□□ 0.04
PCP4L1A6NKN8 ST3GAL4-203ENST00000392669 1724 ntAPPRIS ALT1 TSL 1 (best) BASIC15.31■□□□□ 0.04
PCP4L1A6NKN8 NAGK-229ENST00000613852 1801 ntTSL 1 (best) BASIC15.31■□□□□ 0.04
PCP4L1A6NKN8 CRAT-201ENST00000318080 2763 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
PCP4L1A6NKN8 DACT1-202ENST00000395153 3734 ntAPPRIS ALT2 TSL 5 BASIC15.31■□□□□ 0.04
PCP4L1A6NKN8 RECQL4-209ENST00000617875 3809 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
PCP4L1A6NKN8 CTU2-210ENST00000567949 1905 ntAPPRIS ALT2 TSL 1 (best) BASIC15.31■□□□□ 0.04
PCP4L1A6NKN8 AC026471.6-201ENST00000622954 1905 ntBASIC15.31■□□□□ 0.04
PCP4L1A6NKN8 SHISA3-201ENST00000319234 1971 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
PCP4L1A6NKN8 BICD1-207ENST00000551848 1962 ntBASIC15.31■□□□□ 0.04
PCP4L1A6NKN8 KRT79-201ENST00000330553 2068 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
PCP4L1A6NKN8 CDK18-201ENST00000360066 3141 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
PCP4L1A6NKN8 SHKBP1-201ENST00000291842 2363 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
PCP4L1A6NKN8 GLOD4-203ENST00000536578 2497 ntTSL 5 BASIC15.31■□□□□ 0.04
PCP4L1A6NKN8 SEPHS2-201ENST00000478753 2551 ntAPPRIS P1 BASIC15.31■□□□□ 0.04
PCP4L1A6NKN8 SLC38A10-201ENST00000288439 2708 ntAPPRIS P3 TSL 1 (best) BASIC15.31■□□□□ 0.04
PCP4L1A6NKN8 CD276-201ENST00000318424 2738 ntTSL 5 BASIC15.31■□□□□ 0.04
PCP4L1A6NKN8 SPEF1-201ENST00000379756 1580 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
PCP4L1A6NKN8 SIN3B-201ENST00000248054 5037 ntAPPRIS ALT2 TSL 1 (best) BASIC15.31■□□□□ 0.04
PCP4L1A6NKN8 C18orf63-201ENST00000579455 5127 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
PCP4L1A6NKN8 RNF180-201ENST00000296615 1727 ntTSL 1 (best) BASIC15.31■□□□□ 0.04
PCP4L1A6NKN8 LRRC34-201ENST00000446859 1718 ntAPPRIS ALT2 TSL 2 BASIC15.31■□□□□ 0.04
PCP4L1A6NKN8 REEP3-201ENST00000373758 5205 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
PCP4L1A6NKN8 ERLEC1-203ENST00000405123 1756 ntTSL 5 BASIC15.31■□□□□ 0.04
PCP4L1A6NKN8 CTU2-202ENST00000453996 1751 ntAPPRIS ALT2 TSL 1 (best) BASIC15.31■□□□□ 0.04
PCP4L1A6NKN8 RBMS1-205ENST00000409972 1815 ntTSL 5 BASIC15.31■□□□□ 0.04
PCP4L1A6NKN8 NUF2-208ENST00000524800 1845 ntTSL 5 BASIC15.31■□□□□ 0.04
PCP4L1A6NKN8 OTUB1-210ENST00000541478 1803 ntTSL 5 BASIC15.31■□□□□ 0.04
PCP4L1A6NKN8 CAMK2B-207ENST00000358707 1895 ntTSL 1 (best) BASIC15.31■□□□□ 0.04
PCP4L1A6NKN8 CLN8-213ENST00000637156 1897 ntAPPRIS P1 TSL 5 BASIC15.31■□□□□ 0.04
PCP4L1A6NKN8 NID1-201ENST00000264187 5864 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
PCP4L1A6NKN8 CD24-201ENST00000606017 2180 ntAPPRIS P3 TSL 1 (best) BASIC15.31■□□□□ 0.04
PCP4L1A6NKN8 ZNF133-206ENST00000402618 2622 ntTSL 2 BASIC15.3■□□□□ 0.04
PCP4L1A6NKN8 IRF4-201ENST00000380956 5331 ntAPPRIS P1 TSL 1 (best) BASIC15.3■□□□□ 0.04
PCP4L1A6NKN8 CYP2S1-201ENST00000310054 2782 ntAPPRIS P1 TSL 1 (best) BASIC15.3■□□□□ 0.04
PCP4L1A6NKN8 BRD3-201ENST00000303407 5652 ntAPPRIS P2 TSL 1 (best) BASIC15.3■□□□□ 0.04
PCP4L1A6NKN8 PTPN21-208ENST00000556564 6166 ntAPPRIS P1 TSL 1 (best) BASIC15.3■□□□□ 0.04
PCP4L1A6NKN8 TRPC4AP-201ENST00000252015 3226 ntAPPRIS P1 TSL 1 (best) BASIC15.3■□□□□ 0.04
PCP4L1A6NKN8 STARD7-201ENST00000337288 3368 ntAPPRIS P1 TSL 1 (best) BASIC15.3■□□□□ 0.04
PCP4L1A6NKN8 DGAT1-206ENST00000528718 3711 ntAPPRIS P1 TSL 1 (best) BASIC15.3■□□□□ 0.04
PCP4L1A6NKN8 LTBP2-201ENST00000261978 8567 ntAPPRIS P2 TSL 1 (best) BASIC15.3■□□□□ 0.04
PCP4L1A6NKN8 SETD1B-201ENST00000267197 5772 ntAPPRIS ALT2 TSL 5 BASIC15.3■□□□□ 0.04
PCP4L1A6NKN8 AFTPH-202ENST00000238856 4040 ntAPPRIS P3 TSL 1 (best) BASIC15.3■□□□□ 0.04
Retrieved 100 of 98,524 protein–RNA pairs in 24.8 ms