Protein–RNA interactions for Protein: A6NGU7

LINC01546, Putative uncharacterized protein encoded by LINC01546, humanhuman

Predictions only

Length 62 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LINC01546A6NGU7 ANTXR2-202ENST00000346652 1343 ntTSL 1 (best) BASIC13.79□□□□□ -0.2
LINC01546A6NGU7 KRT19-201ENST00000361566 1390 ntAPPRIS P1 TSL 1 (best) BASIC13.79□□□□□ -0.2
LINC01546A6NGU7 MCOLN1-201ENST00000264079 2082 ntAPPRIS P1 TSL 1 (best) BASIC13.79□□□□□ -0.2
LINC01546A6NGU7 LGI4-201ENST00000310123 2814 ntAPPRIS P1 TSL 1 (best) BASIC13.79□□□□□ -0.2
LINC01546A6NGU7 ALKBH4-201ENST00000292566 2105 ntAPPRIS P1 TSL 1 (best) BASIC13.79□□□□□ -0.2
LINC01546A6NGU7 ZCWPW1-201ENST00000360951 2110 ntAPPRIS ALT2 TSL 2 BASIC13.79□□□□□ -0.2
LINC01546A6NGU7 AL096870.2-201ENST00000565988 2108 ntTSL 1 (best) BASIC13.79□□□□□ -0.2
LINC01546A6NGU7 TSPAN4-206ENST00000397408 1430 ntAPPRIS P1 TSL 2 BASIC13.79□□□□□ -0.2
LINC01546A6NGU7 TP73-AS1-203ENST00000423764 2875 ntTSL 1 (best) BASIC13.79□□□□□ -0.2
LINC01546A6NGU7 C18orf8-201ENST00000269221 2162 ntAPPRIS P1 TSL 1 (best) BASIC13.79□□□□□ -0.2
LINC01546A6NGU7 MXRA8-202ENST00000342753 2231 ntTSL 1 (best) BASIC13.79□□□□□ -0.2
LINC01546A6NGU7 PSKH1-202ENST00000570631 1509 ntTSL 1 (best) BASIC13.79□□□□□ -0.2
LINC01546A6NGU7 SCARB1-211ENST00000546215 1597 ntTSL 1 (best) BASIC13.79□□□□□ -0.2
LINC01546A6NGU7 RPS6KA1-204ENST00000374168 3186 ntAPPRIS P1 TSL 1 (best) BASIC13.79□□□□□ -0.2
LINC01546A6NGU7 CNOT9-209ENST00000627282 1621 ntTSL 2 BASIC13.79□□□□□ -0.2
LINC01546A6NGU7 KCNMA1-293ENST00000640969 5789 ntAPPRIS ALT2 TSL 5 BASIC13.79□□□□□ -0.2
LINC01546A6NGU7 FLCN-203ENST00000389169 1692 ntTSL 1 (best) BASIC13.79□□□□□ -0.2
LINC01546A6NGU7 PCOLCE-AS1-201ENST00000442166 2537 ntTSL 2 BASIC13.79□□□□□ -0.2
LINC01546A6NGU7 CD248-201ENST00000311330 2558 ntAPPRIS P1 BASIC13.78□□□□□ -0.2
LINC01546A6NGU7 WDR88-201ENST00000355868 1718 ntAPPRIS P2 TSL 2 BASIC13.78□□□□□ -0.2
LINC01546A6NGU7 ZNF815P-204ENST00000434898 1737 ntBASIC13.78□□□□□ -0.2
LINC01546A6NGU7 NDUFS7-210ENST00000539480 1743 ntTSL 2 BASIC13.78□□□□□ -0.2
LINC01546A6NGU7 SEPT8-216ENST00000620483 4335 ntTSL 5 BASIC13.78□□□□□ -0.2
LINC01546A6NGU7 MAPRE3-201ENST00000233121 1892 ntAPPRIS P1 TSL 1 (best) BASIC13.78□□□□□ -0.2
LINC01546A6NGU7 ISL2-201ENST00000290759 1881 ntAPPRIS P1 TSL 1 (best) BASIC13.78□□□□□ -0.2
LINC01546A6NGU7 MAPKAP1-205ENST00000373503 3045 ntTSL 1 (best) BASIC13.78□□□□□ -0.2
LINC01546A6NGU7 MAEA-201ENST00000264750 2058 ntTSL 2 BASIC13.78□□□□□ -0.2
LINC01546A6NGU7 BOD1L2-201ENST00000585477 3239 ntAPPRIS P1 BASIC13.78□□□□□ -0.2
LINC01546A6NGU7 EGFR-202ENST00000342916 2239 ntTSL 1 (best) BASIC13.78□□□□□ -0.2
LINC01546A6NGU7 SYTL1-208ENST00000543823 2229 ntAPPRIS P1 TSL 1 (best) BASIC13.78□□□□□ -0.2
LINC01546A6NGU7 SLC35A3-205ENST00000465289 5696 ntAPPRIS P1 TSL 5 BASIC13.78□□□□□ -0.2
LINC01546A6NGU7 TRIM47-201ENST00000254816 2266 ntAPPRIS P1 TSL 1 (best) BASIC13.78□□□□□ -0.2
LINC01546A6NGU7 LRRC36-201ENST00000329956 2395 ntAPPRIS P1 TSL 1 (best) BASIC13.78□□□□□ -0.2
LINC01546A6NGU7 PYCARD-202ENST00000350605 696 ntTSL 1 (best) BASIC13.78□□□□□ -0.2
LINC01546A6NGU7 LYPD2-201ENST00000359228 594 ntAPPRIS P1 TSL 1 (best) BASIC13.78□□□□□ -0.2
LINC01546A6NGU7 HSPE1-203ENST00000409729 478 ntTSL 2 BASIC13.78□□□□□ -0.2
LINC01546A6NGU7 AL121761.1-202ENST00000412571 415 ntTSL 2 BASIC13.78□□□□□ -0.2
LINC01546A6NGU7 OR2A1-AS1-204ENST00000470435 602 ntBASIC13.78□□□□□ -0.2
LINC01546A6NGU7 AC021660.2-201ENST00000502999 388 ntTSL 3 BASIC13.78□□□□□ -0.2
LINC01546A6NGU7 KRT18P20-201ENST00000548986 1279 ntBASIC13.78□□□□□ -0.2
LINC01546A6NGU7 SEC23A-213ENST00000557280 561 ntTSL 4 BASIC13.78□□□□□ -0.2
LINC01546A6NGU7 DUX4L2-201ENST00000561772 1275 ntBASIC13.78□□□□□ -0.2
LINC01546A6NGU7 AL512625.3-202ENST00000591993 1091 ntTSL 1 (best) BASIC13.78□□□□□ -0.2
LINC01546A6NGU7 DUX4-206ENST00000616166 1275 ntAPPRIS P2 BASIC13.78□□□□□ -0.2
LINC01546A6NGU7 DUX4L6-201ENST00000626483 1275 ntBASIC13.78□□□□□ -0.2
LINC01546A6NGU7 DUX4L1-201ENST00000627662 1275 ntBASIC13.78□□□□□ -0.2
LINC01546A6NGU7 DUX4L8-201ENST00000629013 1275 ntBASIC13.78□□□□□ -0.2
LINC01546A6NGU7 DUX4L3-201ENST00000630187 1275 ntBASIC13.78□□□□□ -0.2
LINC01546A6NGU7 DUX4L7-201ENST00000630678 1275 ntBASIC13.78□□□□□ -0.2
LINC01546A6NGU7 DUX4L5-201ENST00000630834 1275 ntBASIC13.78□□□□□ -0.2
LINC01546A6NGU7 RWDD4-202ENST00000327570 2590 ntAPPRIS ALT1 TSL 3 BASIC13.78□□□□□ -0.2
LINC01546A6NGU7 KCNH2-203ENST00000430723 2648 ntTSL 5 BASIC13.78□□□□□ -0.2
LINC01546A6NGU7 FAM213B-202ENST00000378425 2665 ntAPPRIS ALT2 TSL 2 BASIC13.78□□□□□ -0.2
LINC01546A6NGU7 AC139713.2-201ENST00000641328 2723 ntBASIC13.78□□□□□ -0.2
LINC01546A6NGU7 TRAF4-201ENST00000262395 2923 ntAPPRIS P1 TSL 1 (best) BASIC13.78□□□□□ -0.2
LINC01546A6NGU7 TOR2A-203ENST00000373284 1523 ntAPPRIS P1 TSL 1 (best) BASIC13.78□□□□□ -0.2
LINC01546A6NGU7 TNFAIP1-202ENST00000544907 1656 ntTSL 2 BASIC13.78□□□□□ -0.2
LINC01546A6NGU7 OLFM2-203ENST00000590841 1665 ntTSL 2 BASIC13.78□□□□□ -0.2
LINC01546A6NGU7 HEXDC-201ENST00000327949 1733 ntAPPRIS P1 TSL 1 (best) BASIC13.78□□□□□ -0.2
LINC01546A6NGU7 FBXL3-201ENST00000355619 3503 ntAPPRIS P1 TSL 1 (best) BASIC13.78□□□□□ -0.2
LINC01546A6NGU7 LLGL2-203ENST00000392550 3509 ntAPPRIS P2 TSL 1 (best) BASIC13.78□□□□□ -0.2
LINC01546A6NGU7 EIF2B4-201ENST00000347454 1792 ntAPPRIS P3 TSL 1 (best) BASIC13.78□□□□□ -0.2
LINC01546A6NGU7 BICRA-204ENST00000614245 5697 ntAPPRIS ALT2 TSL 5 BASIC13.78□□□□□ -0.2
LINC01546A6NGU7 PTGIR-201ENST00000291294 2107 ntAPPRIS P1 TSL 1 (best) BASIC13.78□□□□□ -0.2
LINC01546A6NGU7 HGFAC-201ENST00000382774 2159 ntAPPRIS P1 TSL 1 (best) BASIC13.78□□□□□ -0.2
LINC01546A6NGU7 FBXL22-202ENST00000534939 2443 ntAPPRIS ALT2 TSL 3 BASIC13.78□□□□□ -0.2
LINC01546A6NGU7 VHL-202ENST00000345392 2696 ntTSL 1 (best) BASIC13.77□□□□□ -0.2
LINC01546A6NGU7 ACTN3-203ENST00000513398 2939 ntAPPRIS P1 TSL 1 (best) BASIC13.77□□□□□ -0.2
LINC01546A6NGU7 PRADC1-201ENST00000258083 1083 ntAPPRIS P1 TSL 1 (best) BASIC13.77□□□□□ -0.21
LINC01546A6NGU7 PPARG-202ENST00000309576 1870 ntAPPRIS ALT1 TSL 2 BASIC13.77□□□□□ -0.21
LINC01546A6NGU7 NETO1-201ENST00000327305 3058 ntAPPRIS P1 TSL 1 (best) BASIC13.77□□□□□ -0.21
LINC01546A6NGU7 SH2D3C-203ENST00000373277 2750 ntAPPRIS ALT2 TSL 1 (best) BASIC13.77□□□□□ -0.21
LINC01546A6NGU7 NRBP1-204ENST00000379863 2174 ntTSL 5 BASIC13.77□□□□□ -0.21
LINC01546A6NGU7 AC092675.2-201ENST00000413274 541 ntTSL 4 BASIC13.77□□□□□ -0.21
LINC01546A6NGU7 EEF1D-205ENST00000442189 2207 ntAPPRIS P4 TSL 1 (best) BASIC13.77□□□□□ -0.21
LINC01546A6NGU7 C19orf60-202ENST00000450195 702 ntAPPRIS ALT2 TSL 1 (best) BASIC13.77□□□□□ -0.21
LINC01546A6NGU7 LINC00969-219ENST00000453324 1439 ntTSL 1 (best) BASIC13.77□□□□□ -0.21
LINC01546A6NGU7 ZNF302-211ENST00000509528 577 ntTSL 4 BASIC13.77□□□□□ -0.21
LINC01546A6NGU7 TMEM263-204ENST00000548125 3349 ntAPPRIS P1 TSL 2 BASIC13.77□□□□□ -0.21
LINC01546A6NGU7 SRR-208ENST00000576848 588 ntTSL 4 BASIC13.77□□□□□ -0.21
LINC01546A6NGU7 AC004982.2-201ENST00000609497 1578 ntTSL 2 BASIC13.77□□□□□ -0.21
LINC01546A6NGU7 CCNJL-203ENST00000393977 3320 ntTSL 1 (best) BASIC13.77□□□□□ -0.21
LINC01546A6NGU7 SF1-203ENST00000377387 2947 ntAPPRIS ALT2 TSL 1 (best) BASIC13.77□□□□□ -0.21
LINC01546A6NGU7 CD276-201ENST00000318424 2738 ntTSL 5 BASIC13.77□□□□□ -0.21
LINC01546A6NGU7 ENTPD6-209ENST00000433259 2654 ntTSL 5 BASIC13.77□□□□□ -0.21
LINC01546A6NGU7 MARCH8-201ENST00000319836 5272 ntAPPRIS P1 TSL 1 (best) BASIC13.77□□□□□ -0.21
LINC01546A6NGU7 GAB1-201ENST00000262994 2648 ntAPPRIS ALT1 TSL 1 (best) BASIC13.77□□□□□ -0.21
LINC01546A6NGU7 REPS1-202ENST00000367663 2607 ntAPPRIS ALT1 TSL 5 BASIC13.77□□□□□ -0.21
LINC01546A6NGU7 DDX31-201ENST00000310532 2408 ntTSL 2 BASIC13.76□□□□□ -0.21
LINC01546A6NGU7 ETNK2-203ENST00000367202 2434 ntAPPRIS P3 TSL 1 (best) BASIC13.76□□□□□ -0.21
LINC01546A6NGU7 SAMD11-215ENST00000618779 2368 ntAPPRIS ALT2 TSL 5 BASIC13.76□□□□□ -0.21
LINC01546A6NGU7 TFEB-206ENST00000403298 2162 ntAPPRIS P1 TSL 5 BASIC13.76□□□□□ -0.21
LINC01546A6NGU7 HARBI1-201ENST00000326737 1967 ntAPPRIS P1 TSL 1 (best) BASIC13.76□□□□□ -0.21
LINC01546A6NGU7 NOP14-AS1-202ENST00000505731 1999 ntTSL 2 BASIC13.76□□□□□ -0.21
LINC01546A6NGU7 FAM87B-201ENST00000326734 1947 ntTSL 2 BASIC13.76□□□□□ -0.21
LINC01546A6NGU7 AC018755.2-202ENST00000429354 1926 ntAPPRIS P1 TSL 1 (best) BASIC13.76□□□□□ -0.21
LINC01546A6NGU7 RGS3-231ENST00000613049 1726 ntTSL 1 (best) BASIC13.76□□□□□ -0.21
LINC01546A6NGU7 FADS1-204ENST00000433932 1690 ntTSL 2 BASIC13.76□□□□□ -0.21
LINC01546A6NGU7 SEPT1-201ENST00000321367 1592 ntAPPRIS P1 TSL 5 BASIC13.76□□□□□ -0.21
LINC01546A6NGU7 CDAN1-201ENST00000356231 4637 ntAPPRIS P1 TSL 1 (best) BASIC13.76□□□□□ -0.21
Retrieved 100 of 98,524 protein–RNA pairs in 22 ms