Protein–RNA interactions for Protein: A6NDI0

TRIM49B, Putative tripartite motif-containing protein 49B, humanhuman

Predictions only

Length 452 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM49BA6NDI0 SLC25A15-201ENST00000338625 1586 ntAPPRIS P1 TSL 1 (best) BASIC21.5■■□□□ 1.03
TRIM49BA6NDI0 MRAP-201ENST00000303645 935 ntAPPRIS P4 TSL 1 (best) BASIC21.5■■□□□ 1.03
TRIM49BA6NDI0 COPS9-201ENST00000307266 759 ntTSL 1 (best) BASIC21.5■■□□□ 1.03
TRIM49BA6NDI0 CUEDC2-201ENST00000369937 1191 ntAPPRIS P1 TSL 1 (best) BASIC21.5■■□□□ 1.03
TRIM49BA6NDI0 AC069152.1-201ENST00000438030 544 ntBASIC21.5■■□□□ 1.03
TRIM49BA6NDI0 AL161908.1-201ENST00000451449 449 ntTSL 2 BASIC21.5■■□□□ 1.03
TRIM49BA6NDI0 ZNF688-205ENST00000563707 244 ntTSL 3 BASIC21.5■■□□□ 1.03
TRIM49BA6NDI0 LIMD2-206ENST00000578993 602 ntTSL 3 BASIC21.5■■□□□ 1.03
TRIM49BA6NDI0 CIDEB-202ENST00000336557 2409 ntAPPRIS P1 TSL 2 BASIC21.5■■□□□ 1.03
TRIM49BA6NDI0 ETV4-204ENST00000545089 1628 ntTSL 2 BASIC21.5■■□□□ 1.03
TRIM49BA6NDI0 EGFL7-203ENST00000371699 2125 ntAPPRIS P1 TSL 2 BASIC21.5■■□□□ 1.03
TRIM49BA6NDI0 CDHR5-201ENST00000349570 2318 ntAPPRIS ALT2 TSL 1 (best) BASIC21.5■■□□□ 1.03
TRIM49BA6NDI0 MMD2-201ENST00000401401 2335 ntAPPRIS P1 TSL 1 (best) BASIC21.5■■□□□ 1.03
TRIM49BA6NDI0 TMEM129-202ENST00000382936 2810 ntAPPRIS P1 TSL 1 (best) BASIC21.5■■□□□ 1.03
TRIM49BA6NDI0 SEPT2-203ENST00000391971 3315 ntAPPRIS P1 TSL 1 (best) BASIC21.5■■□□□ 1.03
TRIM49BA6NDI0 P2RY2-201ENST00000311131 2660 ntAPPRIS P1 TSL 1 (best) BASIC21.5■■□□□ 1.03
TRIM49BA6NDI0 TIMP4-201ENST00000287814 1650 ntAPPRIS P1 TSL 1 (best) BASIC21.5■■□□□ 1.03
TRIM49BA6NDI0 MELTF-202ENST00000296351 1650 ntTSL 1 (best) BASIC21.5■■□□□ 1.03
TRIM49BA6NDI0 HCG18-235ENST00000426882 4862 ntTSL 1 (best) BASIC21.5■■□□□ 1.03
TRIM49BA6NDI0 SLC23A3-201ENST00000295738 2037 ntTSL 1 (best) BASIC21.5■■□□□ 1.03
TRIM49BA6NDI0 CAPZB-202ENST00000264203 2068 ntTSL 2 BASIC21.49■■□□□ 1.03
TRIM49BA6NDI0 PDCD10-201ENST00000392750 2067 ntAPPRIS P1 TSL 1 (best) BASIC21.49■■□□□ 1.03
TRIM49BA6NDI0 TMEM235-201ENST00000374946 2409 ntTSL 5 BASIC21.49■■□□□ 1.03
TRIM49BA6NDI0 DLGAP4-201ENST00000339266 5016 ntAPPRIS ALT2 TSL 5 BASIC21.49■■□□□ 1.03
TRIM49BA6NDI0 SLC25A3-201ENST00000188376 1909 ntAPPRIS ALT1 TSL 1 (best) BASIC21.49■■□□□ 1.03
TRIM49BA6NDI0 UBE2Q2-204ENST00000561851 1582 ntTSL 2 BASIC21.49■■□□□ 1.03
TRIM49BA6NDI0 COLEC12-201ENST00000400256 5742 ntAPPRIS P1 TSL 1 (best) BASIC21.49■■□□□ 1.03
TRIM49BA6NDI0 WRNIP1-202ENST00000380769 3239 ntTSL 1 (best) BASIC21.49■■□□□ 1.03
TRIM49BA6NDI0 AC069544.2-201ENST00000640019 2528 ntAPPRIS P1 TSL 1 (best) BASIC21.49■■□□□ 1.03
TRIM49BA6NDI0 ENTPD6-201ENST00000354989 2708 ntAPPRIS ALT2 TSL 1 (best) BASIC21.49■■□□□ 1.03
TRIM49BA6NDI0 CFC1-201ENST00000259216 1046 ntAPPRIS P1 TSL 1 (best) BASIC21.49■■□□□ 1.03
TRIM49BA6NDI0 CFC1B-201ENST00000281882 1071 ntAPPRIS P1 TSL 1 (best) BASIC21.49■■□□□ 1.03
TRIM49BA6NDI0 DGCR6L-202ENST00000405465 962 ntTSL 3 BASIC21.49■■□□□ 1.03
TRIM49BA6NDI0 FFAR3-202ENST00000594310 1182 ntAPPRIS P1 BASIC21.49■■□□□ 1.03
TRIM49BA6NDI0 WT1-205ENST00000452863 2768 ntAPPRIS ALT2 TSL 1 (best) BASIC21.49■■□□□ 1.03
TRIM49BA6NDI0 CHMP6-201ENST00000325167 1664 ntAPPRIS P1 TSL 1 (best) BASIC21.49■■□□□ 1.03
TRIM49BA6NDI0 SMPD3-203ENST00000563226 2093 ntTSL 1 (best) BASIC21.49■■□□□ 1.03
TRIM49BA6NDI0 SMURF1-202ENST00000361368 5581 ntAPPRIS P1 TSL 1 (best) BASIC21.49■■□□□ 1.03
TRIM49BA6NDI0 KIF1BP-201ENST00000361983 2544 ntAPPRIS P1 TSL 1 (best) BASIC21.49■■□□□ 1.03
TRIM49BA6NDI0 RPS6KA1-203ENST00000374166 3131 ntTSL 5 BASIC21.49■■□□□ 1.03
TRIM49BA6NDI0 SEPT6-202ENST00000354228 1576 ntAPPRIS P4 TSL 1 (best) BASIC21.48■■□□□ 1.03
TRIM49BA6NDI0 MLF2-201ENST00000203630 1969 ntAPPRIS P1 TSL 1 (best) BASIC21.48■■□□□ 1.03
TRIM49BA6NDI0 SLC5A10-205ENST00000417251 1984 ntTSL 2 BASIC21.48■■□□□ 1.03
TRIM49BA6NDI0 SNAP47-202ENST00000366759 2362 ntAPPRIS P3 TSL 1 (best) BASIC21.48■■□□□ 1.03
TRIM49BA6NDI0 TMEM70-201ENST00000312184 2018 ntAPPRIS P1 TSL 1 (best) BASIC21.48■■□□□ 1.03
TRIM49BA6NDI0 DBNL-210ENST00000448521 1808 ntAPPRIS ALT1 TSL 1 (best) BASIC21.48■■□□□ 1.03
TRIM49BA6NDI0 PTH2R-204ENST00000617735 2472 ntTSL 2 BASIC21.48■■□□□ 1.03
TRIM49BA6NDI0 ST3GAL4-205ENST00000449406 1669 ntTSL 5 BASIC21.48■■□□□ 1.03
TRIM49BA6NDI0 GOLGA6L3-201ENST00000507199 1679 ntBASIC21.48■■□□□ 1.03
TRIM49BA6NDI0 HEMK1-206ENST00000455834 1499 ntAPPRIS P1 TSL 5 BASIC21.48■■□□□ 1.03
TRIM49BA6NDI0 AIDA-202ENST00000355727 1072 ntTSL 5 BASIC21.48■■□□□ 1.03
TRIM49BA6NDI0 AC004889.1-203ENST00000464929 819 ntTSL 5 BASIC21.48■■□□□ 1.03
TRIM49BA6NDI0 OR2A1-AS1-207ENST00000486094 819 ntBASIC21.48■■□□□ 1.03
TRIM49BA6NDI0 UNC93B6-201ENST00000525262 1143 ntTSL 5 BASIC21.48■■□□□ 1.03
TRIM49BA6NDI0 SOX15-202ENST00000538513 1050 ntAPPRIS P1 TSL 1 (best) BASIC21.48■■□□□ 1.03
TRIM49BA6NDI0 FAM219B-212ENST00000565772 1249 ntTSL 1 (best) BASIC21.48■■□□□ 1.03
TRIM49BA6NDI0 AC142086.2-201ENST00000569753 217 ntBASIC21.48■■□□□ 1.03
TRIM49BA6NDI0 SOX15-203ENST00000570788 1093 ntBASIC21.48■■□□□ 1.03
TRIM49BA6NDI0 PAQR4-205ENST00000576565 842 ntTSL 2 BASIC21.48■■□□□ 1.03
TRIM49BA6NDI0 ANAPC11-219ENST00000583839 499 ntAPPRIS P1 TSL 2 BASIC21.48■■□□□ 1.03
TRIM49BA6NDI0 SPATA20-226ENST00000619622 2769 ntAPPRIS P2 TSL 5 BASIC21.48■■□□□ 1.03
TRIM49BA6NDI0 NR1H2-201ENST00000253727 1998 ntAPPRIS P2 TSL 1 (best) BASIC21.48■■□□□ 1.03
TRIM49BA6NDI0 PCCA-201ENST00000376279 2418 ntTSL 2 BASIC21.48■■□□□ 1.03
TRIM49BA6NDI0 RFC2-202ENST00000352131 1576 ntTSL 1 (best) BASIC21.48■■□□□ 1.03
TRIM49BA6NDI0 SGCE-207ENST00000447873 1597 ntTSL 1 (best) BASIC21.48■■□□□ 1.03
TRIM49BA6NDI0 DPF1-209ENST00000456296 1562 ntAPPRIS P1 TSL 5 BASIC21.48■■□□□ 1.03
TRIM49BA6NDI0 AC004982.2-201ENST00000609497 1578 ntTSL 2 BASIC21.48■■□□□ 1.03
TRIM49BA6NDI0 PYURF-201ENST00000273968 1361 ntAPPRIS P1 TSL 1 (best) BASIC21.48■■□□□ 1.03
TRIM49BA6NDI0 EIF4E3-201ENST00000295612 2764 ntTSL 1 (best) BASIC21.48■■□□□ 1.03
TRIM49BA6NDI0 NOP56-201ENST00000329276 2400 ntAPPRIS P1 TSL 1 (best) BASIC21.47■■□□□ 1.03
TRIM49BA6NDI0 NCBP2-207ENST00000452404 1133 ntTSL 2 BASIC21.47■■□□□ 1.03
TRIM49BA6NDI0 AL929601.1-201ENST00000551565 573 ntTSL 4 BASIC21.47■■□□□ 1.03
TRIM49BA6NDI0 TMEM214-203ENST00000404032 2830 ntTSL 2 BASIC21.47■■□□□ 1.03
TRIM49BA6NDI0 GCOM1-202ENST00000380569 1846 ntAPPRIS P3 TSL 2 BASIC21.47■■□□□ 1.03
TRIM49BA6NDI0 TCTA-201ENST00000273590 2146 ntAPPRIS P1 TSL 1 (best) BASIC21.47■■□□□ 1.03
TRIM49BA6NDI0 CORO1B-201ENST00000341356 1881 ntAPPRIS P1 TSL 1 (best) BASIC21.47■■□□□ 1.03
TRIM49BA6NDI0 PRKCSH-209ENST00000589838 1898 ntAPPRIS P3 TSL 1 (best) BASIC21.47■■□□□ 1.03
TRIM49BA6NDI0 TEX21P-204ENST00000641479 1693 ntBASIC21.47■■□□□ 1.03
TRIM49BA6NDI0 CNNM1-201ENST00000356713 5959 ntAPPRIS P1 TSL 1 (best) BASIC21.46■■□□□ 1.03
TRIM49BA6NDI0 ANKDD1B-204ENST00000601380 2569 ntAPPRIS P1 TSL 5 BASIC21.46■■□□□ 1.03
TRIM49BA6NDI0 MCIDAS-201ENST00000513312 1736 ntAPPRIS P1 TSL 1 (best) BASIC21.46■■□□□ 1.03
TRIM49BA6NDI0 MAP3K21-203ENST00000366624 5809 ntAPPRIS P2 TSL 1 (best) BASIC21.46■■□□□ 1.03
TRIM49BA6NDI0 MORC4-201ENST00000255495 2940 ntAPPRIS ALT2 TSL 1 (best) BASIC21.46■■□□□ 1.03
TRIM49BA6NDI0 SARDH-201ENST00000298628 1484 ntTSL 1 (best) BASIC21.46■■□□□ 1.03
TRIM49BA6NDI0 GGT2-201ENST00000401924 2366 ntAPPRIS P1 TSL 5 BASIC21.46■■□□□ 1.03
TRIM49BA6NDI0 PSMB11-201ENST00000408907 2110 ntAPPRIS P1 BASIC21.46■■□□□ 1.03
TRIM49BA6NDI0 FXYD6-211ENST00000539526 2132 ntAPPRIS P2 TSL 1 (best) BASIC21.46■■□□□ 1.03
TRIM49BA6NDI0 PNCK-201ENST00000340888 1508 ntAPPRIS P1 TSL 5 BASIC21.46■■□□□ 1.03
TRIM49BA6NDI0 DIP2A-203ENST00000435722 2760 ntTSL 2 BASIC21.46■■□□□ 1.03
TRIM49BA6NDI0 ORAI2-204ENST00000473939 2493 ntAPPRIS P1 TSL 1 (best) BASIC21.46■■□□□ 1.03
TRIM49BA6NDI0 IDUA-201ENST00000247933 2163 ntAPPRIS P1 TSL 1 (best) BASIC21.46■■□□□ 1.03
TRIM49BA6NDI0 CEP78-201ENST00000277082 2542 ntAPPRIS ALT2 TSL 2 BASIC21.46■■□□□ 1.03
TRIM49BA6NDI0 TMEM218-207ENST00000528724 1117 ntTSL 5 BASIC21.46■■□□□ 1.03
TRIM49BA6NDI0 TMEM218-214ENST00000532156 954 ntTSL 1 (best) BASIC21.46■■□□□ 1.03
TRIM49BA6NDI0 PNN-205ENST00000556530 601 ntTSL 2 BASIC21.46■■□□□ 1.03
TRIM49BA6NDI0 COX4I1-202ENST00000561569 716 ntAPPRIS P1 TSL 2 BASIC21.46■■□□□ 1.03
TRIM49BA6NDI0 AC003102.1-201ENST00000588279 569 ntTSL 4 BASIC21.46■■□□□ 1.03
TRIM49BA6NDI0 AC120498.8-201ENST00000614275 531 ntBASIC21.46■■□□□ 1.03
TRIM49BA6NDI0 AC133041.1-202ENST00000642053 222 ntBASIC21.46■■□□□ 1.03
TRIM49BA6NDI0 LINC01465-201ENST00000408887 1940 ntBASIC21.46■■□□□ 1.03
Retrieved 100 of 98,524 protein–RNA pairs in 43 ms