Protein–RNA interactions for Protein: A0A1B0GX56

TRDV1, T-cell receptor delta variable 1 (Fragment), humanhuman

Predictions only

Length 115 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRDV1A0A1B0GX56 ATRN-201ENST00000262919 8633 ntAPPRIS P4 TSL 5 BASIC17.17■□□□□ 0.34
TRDV1A0A1B0GX56 C5orf38-201ENST00000334000 890 ntAPPRIS P3 TSL 1 (best) BASIC17.17■□□□□ 0.34
TRDV1A0A1B0GX56 TPSAB1-201ENST00000338844 1175 ntAPPRIS P2 TSL 1 (best) BASIC17.17■□□□□ 0.34
TRDV1A0A1B0GX56 DNLZ-202ENST00000371739 2934 ntTSL 5 BASIC17.17■□□□□ 0.34
TRDV1A0A1B0GX56 LAD1-202ENST00000391967 2906 ntTSL 1 (best) BASIC17.17■□□□□ 0.34
TRDV1A0A1B0GX56 SETD7-202ENST00000404104 1590 ntTSL 2 BASIC17.17■□□□□ 0.34
TRDV1A0A1B0GX56 LINC01167-201ENST00000423232 604 ntTSL 3 BASIC17.17■□□□□ 0.34
TRDV1A0A1B0GX56 COL19A1-203ENST00000478620 589 ntTSL 1 (best) BASIC17.17■□□□□ 0.34
TRDV1A0A1B0GX56 CASP6-205ENST00000505486 538 ntTSL 4 BASIC17.17■□□□□ 0.34
TRDV1A0A1B0GX56 ETS1-208ENST00000535549 4594 ntTSL 1 (best) BASIC17.17■□□□□ 0.34
TRDV1A0A1B0GX56 AC090241.2-201ENST00000602329 432 ntTSL 4 BASIC17.17■□□□□ 0.34
TRDV1A0A1B0GX56 PKD2-201ENST00000237596 5056 ntAPPRIS P1 TSL 1 (best) BASIC17.17■□□□□ 0.34
TRDV1A0A1B0GX56 IFFO1-204ENST00000396840 2677 ntAPPRIS ALT1 TSL 5 BASIC17.17■□□□□ 0.34
TRDV1A0A1B0GX56 APLP2-210ENST00000528499 2530 ntTSL 1 (best) BASIC17.17■□□□□ 0.34
TRDV1A0A1B0GX56 CHTOP-204ENST00000368694 2096 ntAPPRIS P3 TSL 1 (best) BASIC17.17■□□□□ 0.34
TRDV1A0A1B0GX56 USP39-202ENST00000409025 1946 ntTSL 5 BASIC17.17■□□□□ 0.34
TRDV1A0A1B0GX56 SEMA3D-202ENST00000444867 1605 ntTSL 1 (best) BASIC17.17■□□□□ 0.34
TRDV1A0A1B0GX56 TBXA2R-202ENST00000411851 1494 ntTSL 2 BASIC17.17■□□□□ 0.34
TRDV1A0A1B0GX56 ZNF668-208ENST00000538906 2865 ntAPPRIS P1 TSL 2 BASIC17.17■□□□□ 0.34
TRDV1A0A1B0GX56 MAN1B1-207ENST00000535144 2296 ntTSL 2 BASIC17.17■□□□□ 0.34
TRDV1A0A1B0GX56 ASB7-203ENST00000558747 2133 ntTSL 5 BASIC17.17■□□□□ 0.34
TRDV1A0A1B0GX56 ADAP1-217ENST00000611167 2118 ntTSL 5 BASIC17.17■□□□□ 0.34
TRDV1A0A1B0GX56 INTS11-209ENST00000450926 1839 ntTSL 5 BASIC17.17■□□□□ 0.34
TRDV1A0A1B0GX56 TMEM91-209ENST00000539627 1843 ntTSL 1 (best) BASIC17.17■□□□□ 0.34
TRDV1A0A1B0GX56 RASSF1-210ENST00000616212 1842 ntTSL 2 BASIC17.17■□□□□ 0.34
TRDV1A0A1B0GX56 LRP1-204ENST00000553277 1693 ntTSL 1 (best) BASIC17.16■□□□□ 0.34
TRDV1A0A1B0GX56 PTTG1IP-204ENST00000445724 2497 ntTSL 2 BASIC17.16■□□□□ 0.34
TRDV1A0A1B0GX56 EIF4ENIF1-202ENST00000344710 3115 ntTSL 1 (best) BASIC17.16■□□□□ 0.34
TRDV1A0A1B0GX56 TSTA3-201ENST00000425753 1362 ntAPPRIS P1 TSL 1 (best) BASIC17.16■□□□□ 0.34
TRDV1A0A1B0GX56 DKK3-202ENST00000396505 2650 ntAPPRIS P1 TSL 1 (best) BASIC17.16■□□□□ 0.34
TRDV1A0A1B0GX56 KRT5-201ENST00000252242 2531 ntAPPRIS P1 TSL 1 (best) BASIC17.16■□□□□ 0.34
TRDV1A0A1B0GX56 TFDP2-202ENST00000467072 1853 ntAPPRIS P3 TSL 1 (best) BASIC17.16■□□□□ 0.34
TRDV1A0A1B0GX56 OTOP3-201ENST00000328801 2363 ntAPPRIS P1 TSL 2 BASIC17.16■□□□□ 0.34
TRDV1A0A1B0GX56 SAMD3-202ENST00000368134 2377 ntAPPRIS P1 TSL 2 BASIC17.16■□□□□ 0.34
TRDV1A0A1B0GX56 SIL1-202ENST00000394817 1923 ntAPPRIS P1 TSL 1 (best) BASIC17.16■□□□□ 0.34
TRDV1A0A1B0GX56 TRIM63-201ENST00000374272 1770 ntAPPRIS P1 TSL 1 (best) BASIC17.16■□□□□ 0.34
TRDV1A0A1B0GX56 YIF1A-201ENST00000359461 943 ntTSL 2 BASIC17.16■□□□□ 0.34
TRDV1A0A1B0GX56 MAP1LC3A-202ENST00000374837 961 ntTSL 3 BASIC17.16■□□□□ 0.34
TRDV1A0A1B0GX56 HLA-G-202ENST00000376815 851 ntBASIC17.16■□□□□ 0.34
TRDV1A0A1B0GX56 HLA-G-203ENST00000376818 1127 ntBASIC17.16■□□□□ 0.34
TRDV1A0A1B0GX56 YIF1A-203ENST00000376901 1124 ntAPPRIS P1 TSL 1 (best) BASIC17.16■□□□□ 0.34
TRDV1A0A1B0GX56 KRBOX1-AS1-201ENST00000447834 2134 ntTSL 2 BASIC17.16■□□□□ 0.34
TRDV1A0A1B0GX56 AC093627.4-202ENST00000479592 591 ntTSL 4 BASIC17.16■□□□□ 0.34
TRDV1A0A1B0GX56 AC005410.1-201ENST00000579522 462 ntTSL 3 BASIC17.16■□□□□ 0.34
TRDV1A0A1B0GX56 NEDD4L-237ENST00000617539 728 ntTSL 2 BASIC17.16■□□□□ 0.34
TRDV1A0A1B0GX56 AL136967.2-201ENST00000623968 743 ntBASIC17.16■□□□□ 0.34
TRDV1A0A1B0GX56 SNRPA-201ENST00000243563 1621 ntAPPRIS P1 TSL 1 (best) BASIC17.16■□□□□ 0.34
TRDV1A0A1B0GX56 GMPPA-213ENST00000622191 1473 ntTSL 5 BASIC17.16■□□□□ 0.34
TRDV1A0A1B0GX56 RIOX2-201ENST00000333396 5347 ntAPPRIS ALT1 TSL 1 (best) BASIC17.16■□□□□ 0.34
TRDV1A0A1B0GX56 FAM46A-203ENST00000369756 5537 ntAPPRIS ALT2 TSL 1 (best) BASIC17.16■□□□□ 0.34
TRDV1A0A1B0GX56 VBP1-201ENST00000286428 1686 ntAPPRIS P1 TSL 1 (best) BASIC17.16■□□□□ 0.34
TRDV1A0A1B0GX56 ANGPTL4-201ENST00000301455 1879 ntAPPRIS P1 TSL 1 (best) BASIC17.16■□□□□ 0.34
TRDV1A0A1B0GX56 IL4I1-202ENST00000391826 1863 ntAPPRIS ALT2 TSL 1 (best) BASIC17.16■□□□□ 0.34
TRDV1A0A1B0GX56 AIRN-201ENST00000601203 4374 ntBASIC17.16■□□□□ 0.34
TRDV1A0A1B0GX56 DENND2A-201ENST00000275884 3735 ntAPPRIS P1 TSL 1 (best) BASIC17.16■□□□□ 0.34
TRDV1A0A1B0GX56 PLIN5-201ENST00000381848 2470 ntAPPRIS P1 TSL 1 (best) BASIC17.15■□□□□ 0.34
TRDV1A0A1B0GX56 TSGA10IP-203ENST00000532620 1925 ntAPPRIS P1 TSL 1 (best) BASIC17.15■□□□□ 0.34
TRDV1A0A1B0GX56 AC022916.1-201ENST00000590478 2658 ntTSL 2 BASIC17.15■□□□□ 0.34
TRDV1A0A1B0GX56 GPATCH3-201ENST00000361720 2123 ntAPPRIS P1 TSL 1 (best) BASIC17.15■□□□□ 0.34
TRDV1A0A1B0GX56 MICU3-201ENST00000318063 3992 ntAPPRIS P2 TSL 1 (best) BASIC17.15■□□□□ 0.34
TRDV1A0A1B0GX56 EIF3J-202ENST00000424492 1550 ntTSL 4 BASIC17.15■□□□□ 0.34
TRDV1A0A1B0GX56 NRBP1-203ENST00000379852 2163 ntAPPRIS P1 TSL 1 (best) BASIC17.15■□□□□ 0.34
TRDV1A0A1B0GX56 NME4-201ENST00000219479 995 ntAPPRIS P1 TSL 1 (best) BASIC17.15■□□□□ 0.34
TRDV1A0A1B0GX56 LGALS7B-201ENST00000314980 483 ntAPPRIS P1 TSL 1 (best) BASIC17.15■□□□□ 0.34
TRDV1A0A1B0GX56 BCKDHB-203ENST00000369760 743 ntTSL 3 BASIC17.15■□□□□ 0.34
TRDV1A0A1B0GX56 NME4-202ENST00000382940 766 ntTSL 3 BASIC17.15■□□□□ 0.34
TRDV1A0A1B0GX56 NKX2-5-202ENST00000424406 1124 ntTSL 1 (best) BASIC17.15■□□□□ 0.34
TRDV1A0A1B0GX56 INTS11-205ENST00000429572 1104 ntTSL 2 BASIC17.15■□□□□ 0.34
TRDV1A0A1B0GX56 LINC01659-202ENST00000449711 917 ntTSL 3 BASIC17.15■□□□□ 0.34
TRDV1A0A1B0GX56 AL731577.2-201ENST00000508096 555 ntTSL 2 BASIC17.15■□□□□ 0.34
TRDV1A0A1B0GX56 TRAPPC2L-213ENST00000567895 854 ntTSL 3 BASIC17.15■□□□□ 0.34
TRDV1A0A1B0GX56 NME4-211ENST00000620944 1193 ntTSL 2 BASIC17.15■□□□□ 0.34
TRDV1A0A1B0GX56 MAST1-208ENST00000591495 1496 ntTSL 5 BASIC17.15■□□□□ 0.34
TRDV1A0A1B0GX56 CYR61-201ENST00000451137 2290 ntAPPRIS P1 TSL 1 (best) BASIC17.15■□□□□ 0.34
TRDV1A0A1B0GX56 PLK3-201ENST00000372201 2492 ntAPPRIS P1 TSL 1 (best) BASIC17.15■□□□□ 0.34
TRDV1A0A1B0GX56 MEN1-205ENST00000377316 2868 ntTSL 5 BASIC17.15■□□□□ 0.34
TRDV1A0A1B0GX56 CASP6-201ENST00000265164 1548 ntAPPRIS P1 TSL 1 (best) BASIC17.15■□□□□ 0.34
TRDV1A0A1B0GX56 DHRS12-201ENST00000218981 1970 ntTSL 2 BASIC17.15■□□□□ 0.34
TRDV1A0A1B0GX56 ORC5-201ENST00000297431 1958 ntAPPRIS P1 TSL 1 (best) BASIC17.15■□□□□ 0.34
TRDV1A0A1B0GX56 PCGF6-201ENST00000337211 1950 ntTSL 1 (best) BASIC17.15■□□□□ 0.34
TRDV1A0A1B0GX56 FP475955.4-201ENST00000623131 1990 ntBASIC17.15■□□□□ 0.34
TRDV1A0A1B0GX56 SIGLEC10-204ENST00000436984 1776 ntTSL 2 BASIC17.15■□□□□ 0.34
TRDV1A0A1B0GX56 TMC6-203ENST00000392467 2833 ntAPPRIS P1 TSL 1 (best) BASIC17.15■□□□□ 0.34
TRDV1A0A1B0GX56 SYT8-201ENST00000341958 1556 ntAPPRIS ALT2 TSL 5 BASIC17.15■□□□□ 0.34
TRDV1A0A1B0GX56 MRPL40-201ENST00000333130 1387 ntAPPRIS P1 TSL 1 (best) BASIC17.15■□□□□ 0.34
TRDV1A0A1B0GX56 EARS2-210ENST00000564501 2027 ntTSL 5 BASIC17.14■□□□□ 0.34
TRDV1A0A1B0GX56 MRGPRG-AS1-201ENST00000420873 1818 ntTSL 2 BASIC17.14■□□□□ 0.34
TRDV1A0A1B0GX56 SLC47A2-201ENST00000325411 2258 ntAPPRIS P3 TSL 1 (best) BASIC17.14■□□□□ 0.33
TRDV1A0A1B0GX56 ADORA2A-213ENST00000610595 2736 ntAPPRIS P1 TSL 2 BASIC17.14■□□□□ 0.33
TRDV1A0A1B0GX56 GALNT2-201ENST00000366672 4454 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.33
TRDV1A0A1B0GX56 HSF2-201ENST00000368455 2549 ntAPPRIS P3 TSL 1 (best) BASIC17.14■□□□□ 0.33
TRDV1A0A1B0GX56 HNF1A-202ENST00000400024 2337 ntTSL 2 BASIC17.14■□□□□ 0.33
TRDV1A0A1B0GX56 RBM42-201ENST00000262633 1680 ntAPPRIS P2 TSL 1 (best) BASIC17.14■□□□□ 0.33
TRDV1A0A1B0GX56 ST6GALNAC4-201ENST00000335791 1691 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.33
TRDV1A0A1B0GX56 HIKESHI-207ENST00000533986 1694 ntTSL 1 (best) BASIC17.14■□□□□ 0.33
TRDV1A0A1B0GX56 ITPK1-202ENST00000354313 2803 ntTSL 1 (best) BASIC17.14■□□□□ 0.33
TRDV1A0A1B0GX56 C16orf59-210ENST00000569496 1911 ntAPPRIS ALT2 TSL 5 BASIC17.14■□□□□ 0.33
TRDV1A0A1B0GX56 MORF4L1-215ENST00000559345 1468 ntTSL 2 BASIC17.14■□□□□ 0.33
TRDV1A0A1B0GX56 NR4A1-203ENST00000394824 2639 ntAPPRIS P1 TSL 5 BASIC17.14■□□□□ 0.33
TRDV1A0A1B0GX56 ASPRV1-201ENST00000320256 2177 ntAPPRIS P1 BASIC17.14■□□□□ 0.33
Retrieved 100 of 98,524 protein–RNA pairs in 22.4 ms