Protein–RNA interactions for Protein: A0A0C4DH59

TRBV5-4, T-cell receptor beta variable 5-4 (Fragment), humanhuman

Predictions only

Length 114 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRBV5-4A0A0C4DH59 MUTYH-204ENST00000372104 1823 ntAPPRIS ALT2 TSL 1 (best) BASIC19.25■□□□□ 0.67
TRBV5-4A0A0C4DH59 MUTYH-205ENST00000372110 1809 ntTSL 1 (best) BASIC19.25■□□□□ 0.67
TRBV5-4A0A0C4DH59 ABHD14A-ACY1-202ENST00000463937 1705 ntAPPRIS ALT2 TSL 5 BASIC19.25■□□□□ 0.67
TRBV5-4A0A0C4DH59 LRPPRC-202ENST00000409659 1610 ntTSL 5 BASIC19.25■□□□□ 0.67
TRBV5-4A0A0C4DH59 UBC-201ENST00000339647 2688 ntAPPRIS P1 TSL 1 (best) BASIC19.25■□□□□ 0.67
TRBV5-4A0A0C4DH59 ADAP1-216ENST00000539900 2178 ntTSL 2 BASIC19.25■□□□□ 0.67
TRBV5-4A0A0C4DH59 CBLN2-201ENST00000269503 2945 ntAPPRIS P1 TSL 1 (best) BASIC19.24■□□□□ 0.67
TRBV5-4A0A0C4DH59 SYTL1-210ENST00000616558 1878 ntAPPRIS P1 TSL 1 (best) BASIC19.24■□□□□ 0.67
TRBV5-4A0A0C4DH59 AC087482.1-204ENST00000636067 2431 ntTSL 5 BASIC19.24■□□□□ 0.67
TRBV5-4A0A0C4DH59 HIKESHI-207ENST00000533986 1694 ntTSL 1 (best) BASIC19.24■□□□□ 0.67
TRBV5-4A0A0C4DH59 WWOX-205ENST00000539474 1670 ntTSL 5 BASIC19.24■□□□□ 0.67
TRBV5-4A0A0C4DH59 DGKZ-203ENST00000421244 2862 ntAPPRIS ALT2 TSL 1 (best) BASIC19.24■□□□□ 0.67
TRBV5-4A0A0C4DH59 SYT7-206ENST00000540677 2013 ntTSL 1 (best) BASIC19.24■□□□□ 0.67
TRBV5-4A0A0C4DH59 JAKMIP1-201ENST00000282924 2585 ntAPPRIS P1 TSL 1 (best) BASIC19.24■□□□□ 0.67
TRBV5-4A0A0C4DH59 MAP3K11-210ENST00000532507 1812 ntTSL 2 BASIC19.24■□□□□ 0.67
TRBV5-4A0A0C4DH59 ATP5D-201ENST00000215375 997 ntAPPRIS P1 TSL 1 (best) BASIC19.24■□□□□ 0.67
TRBV5-4A0A0C4DH59 FMR1-202ENST00000334557 1295 ntTSL 1 (best) BASIC19.24■□□□□ 0.67
TRBV5-4A0A0C4DH59 TESC-AS1-201ENST00000547006 1053 ntTSL 2 BASIC19.24■□□□□ 0.67
TRBV5-4A0A0C4DH59 HSD3B7-202ENST00000297679 2172 ntAPPRIS P1 TSL 1 (best) BASIC19.24■□□□□ 0.67
TRBV5-4A0A0C4DH59 HTR1E-201ENST00000305344 2052 ntAPPRIS P1 TSL 1 (best) BASIC19.24■□□□□ 0.67
TRBV5-4A0A0C4DH59 JMJD4-202ENST00000438896 2502 ntTSL 2 BASIC19.24■□□□□ 0.67
TRBV5-4A0A0C4DH59 TMEM175-220ENST00000515740 1514 ntTSL 3 BASIC19.24■□□□□ 0.67
TRBV5-4A0A0C4DH59 RASSF1-202ENST00000357043 1864 ntAPPRIS P3 TSL 1 (best) BASIC19.24■□□□□ 0.67
TRBV5-4A0A0C4DH59 SPHK1-207ENST00000590959 1851 ntAPPRIS ALT2 TSL 1 (best) BASIC19.24■□□□□ 0.67
TRBV5-4A0A0C4DH59 TWF2-203ENST00000499914 1440 ntTSL 5 BASIC19.24■□□□□ 0.67
TRBV5-4A0A0C4DH59 DNAJC11-201ENST00000294401 2210 ntTSL 1 (best) BASIC19.24■□□□□ 0.67
TRBV5-4A0A0C4DH59 ANTXR1-203ENST00000409829 2221 ntTSL 1 (best) BASIC19.24■□□□□ 0.67
TRBV5-4A0A0C4DH59 BLACE-201ENST00000378120 2456 ntAPPRIS P1 TSL 1 (best) BASIC19.24■□□□□ 0.67
TRBV5-4A0A0C4DH59 NPIPA8-201ENST00000525596 1565 ntAPPRIS P1 TSL 1 (best) BASIC19.23■□□□□ 0.67
TRBV5-4A0A0C4DH59 FAM76B-204ENST00000536839 2546 ntAPPRIS ALT1 TSL 5 BASIC19.23■□□□□ 0.67
TRBV5-4A0A0C4DH59 MFSD10-201ENST00000329687 2173 ntAPPRIS P1 TSL 1 (best) BASIC19.23■□□□□ 0.67
TRBV5-4A0A0C4DH59 KLRG2-201ENST00000340940 2197 ntAPPRIS P1 TSL 1 (best) BASIC19.23■□□□□ 0.67
TRBV5-4A0A0C4DH59 PELI3-202ENST00000349459 2783 ntAPPRIS P1 TSL 1 (best) BASIC19.23■□□□□ 0.67
TRBV5-4A0A0C4DH59 AP3S1-201ENST00000316788 1730 ntAPPRIS P1 TSL 1 (best) BASIC19.23■□□□□ 0.67
TRBV5-4A0A0C4DH59 PRKAG2-203ENST00000418337 2318 ntTSL 1 (best) BASIC19.23■□□□□ 0.67
TRBV5-4A0A0C4DH59 ARSB-201ENST00000264914 5327 ntAPPRIS P1 TSL 1 (best) BASIC19.23■□□□□ 0.67
TRBV5-4A0A0C4DH59 MYEOV-202ENST00000441339 1996 ntAPPRIS P3 TSL 2 BASIC19.23■□□□□ 0.67
TRBV5-4A0A0C4DH59 ACOT8-201ENST00000217455 1168 ntAPPRIS P1 TSL 1 (best) BASIC19.23■□□□□ 0.67
TRBV5-4A0A0C4DH59 SIVA1-201ENST00000329967 802 ntAPPRIS P2 TSL 1 (best) BASIC19.23■□□□□ 0.67
TRBV5-4A0A0C4DH59 C1orf50-201ENST00000372525 996 ntAPPRIS P1 TSL 1 (best) BASIC19.23■□□□□ 0.67
TRBV5-4A0A0C4DH59 GPR3-201ENST00000374024 2115 ntAPPRIS P1 TSL 1 (best) BASIC19.23■□□□□ 0.67
TRBV5-4A0A0C4DH59 SMG1P1-207ENST00000446662 852 ntTSL 5 BASIC19.23■□□□□ 0.67
TRBV5-4A0A0C4DH59 C1orf52-203ENST00000471115 1219 ntAPPRIS P1 TSL 1 (best) BASIC19.23■□□□□ 0.67
TRBV5-4A0A0C4DH59 SFXN1-203ENST00000502393 637 ntTSL 2 BASIC19.23■□□□□ 0.67
TRBV5-4A0A0C4DH59 HGNC:18790-208ENST00000506380 798 ntAPPRIS P1 TSL 3 BASIC19.23■□□□□ 0.67
TRBV5-4A0A0C4DH59 COX6C-208ENST00000522940 694 ntAPPRIS P1 TSL 3 BASIC19.23■□□□□ 0.67
TRBV5-4A0A0C4DH59 MIXL1-202ENST00000542034 839 ntTSL 1 (best) BASIC19.23■□□□□ 0.67
TRBV5-4A0A0C4DH59 RARRES2P10-201ENST00000564312 460 ntBASIC19.23■□□□□ 0.67
TRBV5-4A0A0C4DH59 AC010336.4-201ENST00000595655 438 ntTSL 5 BASIC19.23■□□□□ 0.67
TRBV5-4A0A0C4DH59 AC020922.2-201ENST00000596786 359 ntTSL 4 BASIC19.23■□□□□ 0.67
TRBV5-4A0A0C4DH59 FGF14-IT1-202ENST00000607251 2123 ntTSL 2 BASIC19.23■□□□□ 0.67
TRBV5-4A0A0C4DH59 BX649632.1-201ENST00000610187 819 ntTSL 3 BASIC19.23■□□□□ 0.67
TRBV5-4A0A0C4DH59 AL353708.3-201ENST00000610272 989 ntBASIC19.23■□□□□ 0.67
TRBV5-4A0A0C4DH59 MRPS2-201ENST00000241600 1510 ntAPPRIS P1 TSL 1 (best) BASIC19.23■□□□□ 0.67
TRBV5-4A0A0C4DH59 ZNF326-202ENST00000361911 1538 ntTSL 1 (best) BASIC19.23■□□□□ 0.67
TRBV5-4A0A0C4DH59 P4HB-203ENST00000439918 1502 ntTSL 5 BASIC19.23■□□□□ 0.67
TRBV5-4A0A0C4DH59 MIXL1-201ENST00000366810 2005 ntAPPRIS P1 TSL 1 (best) BASIC19.23■□□□□ 0.67
TRBV5-4A0A0C4DH59 AC116562.4-201ENST00000641316 2276 ntBASIC19.23■□□□□ 0.67
TRBV5-4A0A0C4DH59 MELTF-202ENST00000296351 1650 ntTSL 1 (best) BASIC19.23■□□□□ 0.67
TRBV5-4A0A0C4DH59 AC126773.2-201ENST00000562172 1682 ntTSL 3 BASIC19.23■□□□□ 0.67
TRBV5-4A0A0C4DH59 TNFSF11-203ENST00000398795 2199 ntAPPRIS P1 TSL 1 (best) BASIC19.23■□□□□ 0.67
TRBV5-4A0A0C4DH59 C21orf91-203ENST00000400559 1593 ntAPPRIS ALT1 TSL 5 BASIC19.23■□□□□ 0.67
TRBV5-4A0A0C4DH59 TRMT6-202ENST00000453074 2239 ntTSL 2 BASIC19.23■□□□□ 0.67
TRBV5-4A0A0C4DH59 STARD10-201ENST00000334805 1963 ntAPPRIS P1 TSL 1 (best) BASIC19.23■□□□□ 0.67
TRBV5-4A0A0C4DH59 FOXD4-201ENST00000382500 1974 ntAPPRIS P1 BASIC19.23■□□□□ 0.67
TRBV5-4A0A0C4DH59 NFIB-207ENST00000397579 3129 ntTSL 5 BASIC19.23■□□□□ 0.67
TRBV5-4A0A0C4DH59 PHLDA3-202ENST00000367311 2640 ntAPPRIS P1 TSL 1 (best) BASIC19.22■□□□□ 0.67
TRBV5-4A0A0C4DH59 STX18-201ENST00000306200 2138 ntAPPRIS P1 TSL 1 (best) BASIC19.22■□□□□ 0.67
TRBV5-4A0A0C4DH59 ROPN1-209ENST00000495093 1376 ntTSL 1 (best) BASIC19.22■□□□□ 0.67
TRBV5-4A0A0C4DH59 IGFBP3-210ENST00000613132 2412 ntTSL 5 BASIC19.22■□□□□ 0.67
TRBV5-4A0A0C4DH59 CDC42EP1-201ENST00000249014 2181 ntAPPRIS P2 TSL 1 (best) BASIC19.22■□□□□ 0.67
TRBV5-4A0A0C4DH59 B4GALT1-202ENST00000535206 1535 ntTSL 1 (best) BASIC19.22■□□□□ 0.67
TRBV5-4A0A0C4DH59 ST3GAL4-217ENST00000534083 1919 ntAPPRIS ALT1 TSL 5 BASIC19.22■□□□□ 0.67
TRBV5-4A0A0C4DH59 SLC35B2-205ENST00000538577 1909 ntTSL 2 BASIC19.22■□□□□ 0.67
TRBV5-4A0A0C4DH59 MTHFD1L-201ENST00000367307 1049 ntTSL 1 (best) BASIC19.22■□□□□ 0.67
TRBV5-4A0A0C4DH59 HP1BP3-202ENST00000375000 928 ntTSL 1 (best) BASIC19.22■□□□□ 0.67
TRBV5-4A0A0C4DH59 TK2-204ENST00000525974 1178 ntTSL 2 BASIC19.22■□□□□ 0.67
TRBV5-4A0A0C4DH59 AC011446.2-202ENST00000592882 756 ntTSL 3 BASIC19.22■□□□□ 0.67
TRBV5-4A0A0C4DH59 FAM197Y4-202ENST00000622692 608 ntBASIC19.22■□□□□ 0.67
TRBV5-4A0A0C4DH59 TMEM191A-211ENST00000637163 1067 ntBASIC19.22■□□□□ 0.67
TRBV5-4A0A0C4DH59 KCNMA1-209ENST00000372443 5059 ntAPPRIS ALT2 TSL 5 BASIC19.22■□□□□ 0.67
TRBV5-4A0A0C4DH59 AC008691.1-203ENST00000515337 1580 ntTSL 2 BASIC19.22■□□□□ 0.67
TRBV5-4A0A0C4DH59 EFHD2-201ENST00000375980 2419 ntAPPRIS P1 TSL 1 (best) BASIC19.22■□□□□ 0.67
TRBV5-4A0A0C4DH59 AC005332.7-201ENST00000614046 2005 ntBASIC19.22■□□□□ 0.67
TRBV5-4A0A0C4DH59 LTBP3-201ENST00000301873 4443 ntAPPRIS ALT2 TSL 2 BASIC19.22■□□□□ 0.67
TRBV5-4A0A0C4DH59 CLINT1-207ENST00000523908 2346 ntAPPRIS ALT1 TSL 1 (best) BASIC19.22■□□□□ 0.67
TRBV5-4A0A0C4DH59 ETV4-204ENST00000545089 1628 ntTSL 2 BASIC19.22■□□□□ 0.67
TRBV5-4A0A0C4DH59 TM9SF1-203ENST00000524835 1938 ntTSL 2 BASIC19.21■□□□□ 0.67
TRBV5-4A0A0C4DH59 FGFR2-224ENST00000613048 4369 ntTSL 5 BASIC19.21■□□□□ 0.67
TRBV5-4A0A0C4DH59 CEMP1-202ENST00000567119 1374 ntAPPRIS P2 BASIC19.21■□□□□ 0.67
TRBV5-4A0A0C4DH59 LGALS9C-209ENST00000581545 1378 ntTSL 5 BASIC19.21■□□□□ 0.67
TRBV5-4A0A0C4DH59 UBE2E1-201ENST00000306627 1511 ntAPPRIS P1 TSL 1 (best) BASIC19.21■□□□□ 0.67
TRBV5-4A0A0C4DH59 LIMS2-204ENST00000409286 1678 ntTSL 2 BASIC19.21■□□□□ 0.67
TRBV5-4A0A0C4DH59 NRL-206ENST00000561028 2103 ntAPPRIS P1 TSL 2 BASIC19.21■□□□□ 0.67
TRBV5-4A0A0C4DH59 ZIM2-208ENST00000629319 2253 ntAPPRIS P1 TSL 5 BASIC19.21■□□□□ 0.67
TRBV5-4A0A0C4DH59 PTPRCAP-201ENST00000326294 1292 ntAPPRIS P1 TSL 1 (best) BASIC19.21■□□□□ 0.67
TRBV5-4A0A0C4DH59 AC108693.2-201ENST00000492981 303 ntTSL 3 BASIC19.21■□□□□ 0.67
TRBV5-4A0A0C4DH59 NKX2-1-202ENST00000498187 2338 ntAPPRIS P1 TSL 1 (best) BASIC19.21■□□□□ 0.67
TRBV5-4A0A0C4DH59 NDUFA13-203ENST00000503283 825 ntTSL 2 BASIC19.21■□□□□ 0.67
TRBV5-4A0A0C4DH59 CNOT8-224ENST00000523698 862 ntTSL 2 BASIC19.21■□□□□ 0.67
Retrieved 100 of 98,524 protein–RNA pairs in 64 ms