Protein–RNA interactions for Protein: A0A0C4DH34

IGHV4-28, Immunoglobulin heavy variable 4-28, humanhuman

Predictions only

Length 117 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
IGHV4-28A0A0C4DH34 MIR4785-201ENST00000585005 73 ntBASIC14.11□□□□□ -0.15
IGHV4-28A0A0C4DH34 IMPA2-208ENST00000589238 923 ntTSL 3 BASIC14.11□□□□□ -0.15
IGHV4-28A0A0C4DH34 WBP2-213ENST00000590221 1745 ntAPPRIS ALT1 TSL 3 BASIC14.11□□□□□ -0.15
IGHV4-28A0A0C4DH34 CD177P1-201ENST00000606252 935 ntBASIC14.11□□□□□ -0.15
IGHV4-28A0A0C4DH34 SLC6A6-208ENST00000621751 1252 ntTSL 1 (best) BASIC14.11□□□□□ -0.15
IGHV4-28A0A0C4DH34 NTAN1-211ENST00000622833 1049 ntTSL 2 BASIC14.11□□□□□ -0.15
IGHV4-28A0A0C4DH34 NTAN1-212ENST00000624579 1115 ntTSL 2 BASIC14.11□□□□□ -0.15
IGHV4-28A0A0C4DH34 SPHK1-203ENST00000545180 2238 ntAPPRIS P3 TSL 2 BASIC14.11□□□□□ -0.15
IGHV4-28A0A0C4DH34 CPLX3-201ENST00000395018 2082 ntAPPRIS P1 TSL 1 (best) BASIC14.11□□□□□ -0.15
IGHV4-28A0A0C4DH34 SLC44A3-203ENST00000446120 2094 ntTSL 2 BASIC14.11□□□□□ -0.15
IGHV4-28A0A0C4DH34 SUMO3-204ENST00000411651 1921 ntTSL 2 BASIC14.11□□□□□ -0.15
IGHV4-28A0A0C4DH34 CCDC71-201ENST00000321895 1781 ntAPPRIS P1 TSL 1 (best) BASIC14.11□□□□□ -0.15
IGHV4-28A0A0C4DH34 NDOR1-201ENST00000344894 1794 ntAPPRIS P1 TSL 1 (best) BASIC14.11□□□□□ -0.15
IGHV4-28A0A0C4DH34 PRSS33-204ENST00000576886 1755 ntTSL 1 (best) BASIC14.11□□□□□ -0.15
IGHV4-28A0A0C4DH34 SNX11-203ENST00000452859 1601 ntTSL 2 BASIC14.11□□□□□ -0.15
IGHV4-28A0A0C4DH34 MARK2-203ENST00000377810 4560 ntAPPRIS ALT2 TSL 5 BASIC14.11□□□□□ -0.15
IGHV4-28A0A0C4DH34 KRT17P2-201ENST00000300992 1314 ntBASIC14.11□□□□□ -0.15
IGHV4-28A0A0C4DH34 ANKLE1-204ENST00000594072 2294 ntTSL 5 BASIC14.11□□□□□ -0.15
IGHV4-28A0A0C4DH34 MTSS1L-201ENST00000338779 4992 ntAPPRIS P2 TSL 1 (best) BASIC14.11□□□□□ -0.15
IGHV4-28A0A0C4DH34 ARNTL2-204ENST00000395901 1954 ntAPPRIS ALT2 TSL 1 (best) BASIC14.11□□□□□ -0.15
IGHV4-28A0A0C4DH34 OGG1-204ENST00000339511 1815 ntTSL 2 BASIC14.11□□□□□ -0.15
IGHV4-28A0A0C4DH34 FUZ-201ENST00000313777 1675 ntAPPRIS P1 TSL 1 (best) BASIC14.1□□□□□ -0.15
IGHV4-28A0A0C4DH34 AOC1-202ENST00000416793 2453 ntTSL 1 (best) BASIC14.1□□□□□ -0.15
IGHV4-28A0A0C4DH34 HSPB2-C11orf52-202ENST00000534100 1521 ntAPPRIS ALT2 TSL 2 BASIC14.1□□□□□ -0.15
IGHV4-28A0A0C4DH34 TXNDC5-201ENST00000379757 2964 ntAPPRIS P1 TSL 1 (best) BASIC14.1□□□□□ -0.15
IGHV4-28A0A0C4DH34 CACNA1A-201ENST00000360228 8627 ntAPPRIS P4 TSL 1 (best) BASIC14.1□□□□□ -0.15
IGHV4-28A0A0C4DH34 FAM3A-203ENST00000369641 1359 ntTSL 5 BASIC14.1□□□□□ -0.15
IGHV4-28A0A0C4DH34 CEMP1-202ENST00000567119 1374 ntAPPRIS P2 BASIC14.1□□□□□ -0.15
IGHV4-28A0A0C4DH34 SSH3-202ENST00000308298 2046 ntTSL 2 BASIC14.1□□□□□ -0.15
IGHV4-28A0A0C4DH34 PDCD2-204ENST00000453163 2657 ntTSL 1 (best) BASIC14.1□□□□□ -0.15
IGHV4-28A0A0C4DH34 CDAN1-201ENST00000356231 4637 ntAPPRIS P1 TSL 1 (best) BASIC14.1□□□□□ -0.15
IGHV4-28A0A0C4DH34 KLHDC4-201ENST00000270583 1886 ntAPPRIS P3 TSL 1 (best) BASIC14.1□□□□□ -0.15
IGHV4-28A0A0C4DH34 PTPN11-202ENST00000392597 1876 ntTSL 1 (best) BASIC14.1□□□□□ -0.15
IGHV4-28A0A0C4DH34 ANKRD13D-202ENST00000447274 2881 ntTSL 1 (best) BASIC14.1□□□□□ -0.15
IGHV4-28A0A0C4DH34 MATN4-204ENST00000372756 2077 ntAPPRIS P2 TSL 1 (best) BASIC14.1□□□□□ -0.15
IGHV4-28A0A0C4DH34 DCAKD-208ENST00000614054 2054 ntAPPRIS P1 TSL 2 BASIC14.1□□□□□ -0.15
IGHV4-28A0A0C4DH34 OLFM1-204ENST00000371793 2444 ntAPPRIS P1 TSL 3 BASIC14.1□□□□□ -0.15
IGHV4-28A0A0C4DH34 GLIPR2-203ENST00000396613 1917 ntTSL 4 BASIC14.1□□□□□ -0.15
IGHV4-28A0A0C4DH34 TRPV6-209ENST00000638686 2298 ntAPPRIS P2 TSL 1 (best) BASIC14.1□□□□□ -0.15
IGHV4-28A0A0C4DH34 SLC1A6-202ENST00000430939 1794 ntTSL 2 BASIC14.1□□□□□ -0.15
IGHV4-28A0A0C4DH34 SSBP2-218ENST00000514493 1790 ntTSL 1 (best) BASIC14.1□□□□□ -0.15
IGHV4-28A0A0C4DH34 MSGN1-201ENST00000281047 606 ntAPPRIS P1 BASIC14.1□□□□□ -0.15
IGHV4-28A0A0C4DH34 HAUS1-201ENST00000282058 1125 ntAPPRIS P1 TSL 1 (best) BASIC14.1□□□□□ -0.15
IGHV4-28A0A0C4DH34 ELF3-AS1-202ENST00000419190 788 ntTSL 2 BASIC14.1□□□□□ -0.15
IGHV4-28A0A0C4DH34 CCK-203ENST00000434608 747 ntAPPRIS P1 TSL 1 (best) BASIC14.1□□□□□ -0.15
IGHV4-28A0A0C4DH34 BABAM1-202ENST00000447614 930 ntAPPRIS ALT2 TSL 5 BASIC14.1□□□□□ -0.15
IGHV4-28A0A0C4DH34 AL365295.1-202ENST00000456100 562 ntTSL 4 BASIC14.1□□□□□ -0.15
IGHV4-28A0A0C4DH34 ATP6V0E1-204ENST00000519911 718 ntTSL 2 BASIC14.1□□□□□ -0.15
IGHV4-28A0A0C4DH34 FOSL1-204ENST00000532401 1132 ntTSL 2 BASIC14.1□□□□□ -0.15
IGHV4-28A0A0C4DH34 EFTUD1P1-201ENST00000558187 596 ntTSL 4 BASIC14.1□□□□□ -0.15
IGHV4-28A0A0C4DH34 TNNT1-208ENST00000587465 1065 ntAPPRIS ALT2 TSL 5 BASIC14.1□□□□□ -0.15
IGHV4-28A0A0C4DH34 ZNF282-204ENST00000610704 3722 ntAPPRIS P1 TSL 1 (best) BASIC14.1□□□□□ -0.15
IGHV4-28A0A0C4DH34 LINC02361-201ENST00000538731 1484 ntTSL 2 BASIC14.1□□□□□ -0.15
IGHV4-28A0A0C4DH34 SMC5-AS1-201ENST00000594708 1818 ntTSL 2 BASIC14.1□□□□□ -0.15
IGHV4-28A0A0C4DH34 DMPK-205ENST00000458663 2548 ntTSL 5 BASIC14.1□□□□□ -0.15
IGHV4-28A0A0C4DH34 SLC25A24-204ENST00000569674 2357 ntBASIC14.1□□□□□ -0.15
IGHV4-28A0A0C4DH34 NKX3-2-201ENST00000382438 2801 ntAPPRIS P1 TSL 1 (best) BASIC14.1□□□□□ -0.15
IGHV4-28A0A0C4DH34 BCKDK-202ENST00000287507 1907 ntTSL 1 (best) BASIC14.09□□□□□ -0.15
IGHV4-28A0A0C4DH34 EMC8-202ENST00000435200 1935 ntTSL 2 BASIC14.09□□□□□ -0.15
IGHV4-28A0A0C4DH34 LINC01521-201ENST00000504184 1943 ntBASIC14.09□□□□□ -0.15
IGHV4-28A0A0C4DH34 FBXW8-201ENST00000309909 2343 ntAPPRIS P1 TSL 1 (best) BASIC14.09□□□□□ -0.15
IGHV4-28A0A0C4DH34 CLDN14-202ENST00000399135 1752 ntAPPRIS P1 TSL 1 (best) BASIC14.09□□□□□ -0.15
IGHV4-28A0A0C4DH34 SORCS3-201ENST00000369699 5530 ntAPPRIS P1 TSL 5 BASIC14.09□□□□□ -0.15
IGHV4-28A0A0C4DH34 PHOSPHO1-202ENST00000413580 2173 ntTSL 2 BASIC14.09□□□□□ -0.15
IGHV4-28A0A0C4DH34 PSMD6-201ENST00000295901 1430 ntAPPRIS P1 TSL 1 (best) BASIC14.09□□□□□ -0.15
IGHV4-28A0A0C4DH34 FAM72B-202ENST00000369390 2396 ntAPPRIS P1 TSL 1 (best) BASIC14.09□□□□□ -0.15
IGHV4-28A0A0C4DH34 FAM99A-201ENST00000382167 1432 ntTSL 1 (best) BASIC14.09□□□□□ -0.15
IGHV4-28A0A0C4DH34 PLD6-201ENST00000321560 2560 ntAPPRIS P1 TSL 1 (best) BASIC14.09□□□□□ -0.15
IGHV4-28A0A0C4DH34 SSR1-204ENST00000474597 1808 ntTSL 5 BASIC14.09□□□□□ -0.15
IGHV4-28A0A0C4DH34 PGAP1-204ENST00000409475 2443 ntTSL 2 BASIC14.09□□□□□ -0.15
IGHV4-28A0A0C4DH34 BIK-201ENST00000216115 953 ntAPPRIS P1 TSL 1 (best) BASIC14.09□□□□□ -0.15
IGHV4-28A0A0C4DH34 TCTEX1D2-201ENST00000325318 673 ntAPPRIS P1 TSL 1 (best) BASIC14.09□□□□□ -0.15
IGHV4-28A0A0C4DH34 ACVR1C-203ENST00000348328 1270 ntTSL 1 (best) BASIC14.09□□□□□ -0.15
IGHV4-28A0A0C4DH34 PMF1-BGLAP-202ENST00000368276 852 ntTSL 3 BASIC14.09□□□□□ -0.15
IGHV4-28A0A0C4DH34 FAM26F-202ENST00000368605 1117 ntAPPRIS P1 TSL 5 BASIC14.09□□□□□ -0.15
IGHV4-28A0A0C4DH34 LCE2B-201ENST00000368780 612 ntAPPRIS P1 TSL 1 (best) BASIC14.09□□□□□ -0.15
IGHV4-28A0A0C4DH34 C1orf50-201ENST00000372525 996 ntAPPRIS P1 TSL 1 (best) BASIC14.09□□□□□ -0.15
IGHV4-28A0A0C4DH34 NIFKP9-201ENST00000419265 221 ntBASIC14.09□□□□□ -0.15
IGHV4-28A0A0C4DH34 AL390719.1-201ENST00000427998 977 ntTSL 1 (best) BASIC14.09□□□□□ -0.15
IGHV4-28A0A0C4DH34 AC004080.6-201ENST00000467897 919 ntTSL 5 BASIC14.09□□□□□ -0.15
IGHV4-28A0A0C4DH34 AC117500.4-201ENST00000542797 617 ntTSL 3 BASIC14.09□□□□□ -0.15
IGHV4-28A0A0C4DH34 PRKACA-209ENST00000590853 1101 ntTSL 5 BASIC14.09□□□□□ -0.15
IGHV4-28A0A0C4DH34 AL353708.3-201ENST00000610272 989 ntBASIC14.09□□□□□ -0.15
IGHV4-28A0A0C4DH34 RBM34-201ENST00000408888 2054 ntAPPRIS P1 TSL 1 (best) BASIC14.09□□□□□ -0.15
IGHV4-28A0A0C4DH34 GUCY1A3-210ENST00000513574 2656 ntAPPRIS P1 TSL 1 (best) BASIC14.09□□□□□ -0.15
IGHV4-28A0A0C4DH34 ABHD13-201ENST00000375898 5338 ntAPPRIS P1 TSL 1 (best) BASIC14.09□□□□□ -0.15
IGHV4-28A0A0C4DH34 TAF7-201ENST00000313368 2334 ntAPPRIS P1 BASIC14.09□□□□□ -0.15
IGHV4-28A0A0C4DH34 RBP4-202ENST00000371467 1314 ntAPPRIS P1 TSL 5 BASIC14.09□□□□□ -0.15
IGHV4-28A0A0C4DH34 AC011511.1-201ENST00000452032 1956 ntAPPRIS P1 TSL 2 BASIC14.09□□□□□ -0.15
IGHV4-28A0A0C4DH34 SNX3-201ENST00000230085 1755 ntAPPRIS P1 TSL 1 (best) BASIC14.09□□□□□ -0.15
IGHV4-28A0A0C4DH34 PDZD3-201ENST00000322712 2204 ntTSL 1 (best) BASIC14.09□□□□□ -0.15
IGHV4-28A0A0C4DH34 NCAN-201ENST00000252575 6387 ntAPPRIS P1 TSL 1 (best) BASIC14.08□□□□□ -0.15
IGHV4-28A0A0C4DH34 TMEM179-206ENST00000616017 1645 ntBASIC14.08□□□□□ -0.15
IGHV4-28A0A0C4DH34 GIPR-202ENST00000304207 1432 ntTSL 1 (best) BASIC14.08□□□□□ -0.15
IGHV4-28A0A0C4DH34 TWF2-203ENST00000499914 1440 ntTSL 5 BASIC14.08□□□□□ -0.15
IGHV4-28A0A0C4DH34 ZBTB46-203ENST00000395104 5198 ntAPPRIS P1 TSL 2 BASIC14.08□□□□□ -0.16
IGHV4-28A0A0C4DH34 FDXR-201ENST00000293195 1875 ntAPPRIS ALT1 TSL 1 (best) BASIC14.08□□□□□ -0.16
IGHV4-28A0A0C4DH34 NTRK3-206ENST00000540489 2145 ntTSL 5 BASIC14.08□□□□□ -0.16
IGHV4-28A0A0C4DH34 MAP2K2-202ENST00000394867 1471 ntTSL 5 BASIC14.08□□□□□ -0.16
IGHV4-28A0A0C4DH34 CELF6-205ENST00000567083 1496 ntAPPRIS ALT2 TSL 2 BASIC14.08□□□□□ -0.16
Retrieved 100 of 98,524 protein–RNA pairs in 17.4 ms