Protein–RNA interactions for Protein: A0A0B4J273

TRAV34, T-cell receptor alpha variable 34 (Fragment), humanhuman

Predictions only

Length 112 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRAV34A0A0B4J273 AC104564.5-201ENST00000584986 278 ntTSL 3 BASIC15.07■□□□□ 0
TRAV34A0A0B4J273 AC008750.8-201ENST00000600067 551 ntAPPRIS P1 TSL 5 BASIC15.07■□□□□ 0
TRAV34A0A0B4J273 MRM1-203ENST00000612760 1284 ntTSL 1 (best) BASIC15.07■□□□□ 0
TRAV34A0A0B4J273 MMP23B-201ENST00000356026 1326 ntAPPRIS P1 TSL 1 (best) BASIC15.07■□□□□ 0
TRAV34A0A0B4J273 TMEM175-212ENST00000508204 1399 ntTSL 3 BASIC15.07■□□□□ 0
TRAV34A0A0B4J273 CDK11B-201ENST00000340677 2534 ntTSL 1 (best) BASIC15.07■□□□□ 0
TRAV34A0A0B4J273 LAG3-201ENST00000203629 1974 ntAPPRIS P2 TSL 1 (best) BASIC15.07■□□□□ 0
TRAV34A0A0B4J273 HR-201ENST00000312841 5351 ntTSL 5 BASIC15.07■□□□□ 0
TRAV34A0A0B4J273 ADAP1-205ENST00000449296 2093 ntTSL 2 BASIC15.07■□□□□ 0
TRAV34A0A0B4J273 GAREM2-202ENST00000407684 5138 ntTSL 2 BASIC15.07■□□□□ 0
TRAV34A0A0B4J273 ASB1-201ENST00000264607 6994 ntAPPRIS P1 TSL 1 (best) BASIC15.07■□□□□ 0
TRAV34A0A0B4J273 STK25-201ENST00000316586 4619 ntAPPRIS P1 TSL 1 (best) BASIC15.07■□□□□ 0
TRAV34A0A0B4J273 IRAK3-203ENST00000545837 1579 ntTSL 1 (best) BASIC15.07■□□□□ 0
TRAV34A0A0B4J273 AC009237.14-201ENST00000609975 1594 ntBASIC15.07■□□□□ 0
TRAV34A0A0B4J273 TBC1D19-201ENST00000264866 2263 ntAPPRIS P1 TSL 1 (best) BASIC15.06■□□□□ 0
TRAV34A0A0B4J273 RAB4A-201ENST00000366690 2966 ntAPPRIS P1 TSL 1 (best) BASIC15.06■□□□□ 0
TRAV34A0A0B4J273 SMYD2-201ENST00000366957 1671 ntAPPRIS P1 TSL 1 (best) BASIC15.06■□□□□ 0
TRAV34A0A0B4J273 FSCN2-202ENST00000417245 1665 ntAPPRIS P1 TSL 1 (best) BASIC15.06■□□□□ 0
TRAV34A0A0B4J273 RAD23A-203ENST00000586534 1746 ntAPPRIS P3 TSL 1 (best) BASIC15.06■□□□□ 0
TRAV34A0A0B4J273 TMEM206-201ENST00000261455 2475 ntAPPRIS P1 TSL 1 (best) BASIC15.06■□□□□ 0
TRAV34A0A0B4J273 GLCCI1-201ENST00000223145 4743 ntAPPRIS P2 TSL 1 (best) BASIC15.06■□□□□ 0
TRAV34A0A0B4J273 GTF2IRD2B-210ENST00000629105 1910 ntTSL 5 BASIC15.06■□□□□ 0
TRAV34A0A0B4J273 NOL4L-211ENST00000621426 6577 ntAPPRIS P2 TSL 5 BASIC15.06■□□□□ 0
TRAV34A0A0B4J273 SNAP91-201ENST00000195649 4434 ntAPPRIS ALT2 TSL 5 BASIC15.06■□□□□ 0
TRAV34A0A0B4J273 SNAP91-204ENST00000369694 4449 ntAPPRIS P2 TSL 5 BASIC15.06■□□□□ 0
TRAV34A0A0B4J273 ASMTL-201ENST00000381317 2027 ntAPPRIS P3 TSL 1 (best) BASIC15.06■□□□□ 0
TRAV34A0A0B4J273 ASMTL-202ENST00000381333 2035 ntAPPRIS ALT2 TSL 2 BASIC15.06■□□□□ 0
TRAV34A0A0B4J273 RAB33B-201ENST00000305626 4562 ntAPPRIS P1 TSL 1 (best) BASIC15.06■□□□□ 0
TRAV34A0A0B4J273 ENC1-201ENST00000302351 5520 ntAPPRIS P1 TSL 1 (best) BASIC15.06■□□□□ 0
TRAV34A0A0B4J273 EBPL-204ENST00000378272 766 ntTSL 3 BASIC15.06■□□□□ 0
TRAV34A0A0B4J273 SFTPC-205ENST00000521315 1046 ntAPPRIS ALT1 TSL 1 (best) BASIC15.06■□□□□ 0
TRAV34A0A0B4J273 HTATIP2-208ENST00000532505 595 ntTSL 2 BASIC15.06■□□□□ 0
TRAV34A0A0B4J273 AL355001.2-201ENST00000620617 1191 ntBASIC15.06■□□□□ 0
TRAV34A0A0B4J273 NBL1-212ENST00000621723 2133 ntAPPRIS P3 TSL 2 BASIC15.06■□□□□ 0
TRAV34A0A0B4J273 KDM1A-202ENST00000400181 3059 ntAPPRIS ALT2 TSL 1 (best) BASIC15.06■□□□□ 0
TRAV34A0A0B4J273 AC135048.1-201ENST00000566056 1318 ntTSL 2 BASIC15.06■□□□□ 0
TRAV34A0A0B4J273 KBTBD13-201ENST00000432196 1377 ntAPPRIS P1 BASIC15.06■□□□□ 0
TRAV34A0A0B4J273 ARHGEF18-201ENST00000319670 5212 ntAPPRIS P3 TSL 1 (best) BASIC15.06■□□□□ 0
TRAV34A0A0B4J273 BAG3-201ENST00000369085 2571 ntAPPRIS P1 TSL 1 (best) BASIC15.06■□□□□ 0
TRAV34A0A0B4J273 EMILIN3-201ENST00000332312 3796 ntAPPRIS P1 TSL 1 (best) BASIC15.06■□□□□ 0
TRAV34A0A0B4J273 FOXP1-214ENST00000493089 2703 ntAPPRIS ALT1 TSL 2 BASIC15.06■□□□□ 0
TRAV34A0A0B4J273 KIAA1147-202ENST00000536163 7296 ntAPPRIS P1 TSL 1 (best) BASIC15.06■□□□□ 0
TRAV34A0A0B4J273 ENTPD8-204ENST00000472938 1749 ntAPPRIS P1 TSL 1 (best) BASIC15.06■□□□□ 0
TRAV34A0A0B4J273 PTPRF-209ENST00000438120 6377 ntAPPRIS P1 TSL 1 (best) BASIC15.06■□□□□ 0
TRAV34A0A0B4J273 EIF2B4-201ENST00000347454 1792 ntAPPRIS P3 TSL 1 (best) BASIC15.06■□□□□ 0
TRAV34A0A0B4J273 TIMM13-201ENST00000215570 1973 ntAPPRIS P1 TSL 1 (best) BASIC15.05■□□□□ 0
TRAV34A0A0B4J273 MAFK-201ENST00000343242 3368 ntAPPRIS P1 TSL 1 (best) BASIC15.05■□□□□ 0
TRAV34A0A0B4J273 TCTA-201ENST00000273590 2146 ntAPPRIS P1 TSL 1 (best) BASIC15.05■□□□□ 0
TRAV34A0A0B4J273 PGAP3-206ENST00000579146 2220 ntTSL 2 BASIC15.05■□□□□ 0
TRAV34A0A0B4J273 RALGPS1-208ENST00000424082 2362 ntTSL 2 BASIC15.05■□□□□ 0
TRAV34A0A0B4J273 PTTG1IP-204ENST00000445724 2497 ntTSL 2 BASIC15.05■□□□□ 0
TRAV34A0A0B4J273 HSD17B12-201ENST00000278353 2571 ntAPPRIS P1 TSL 1 (best) BASIC15.05■□□□□ 0
TRAV34A0A0B4J273 SATB1-201ENST00000338745 7810 ntAPPRIS P1 TSL 1 (best) BASIC15.05■□□□□ 0
TRAV34A0A0B4J273 CACTIN-201ENST00000221899 2797 ntAPPRIS P1 TSL 1 (best) BASIC15.05■□□□□ 0
TRAV34A0A0B4J273 CDC42EP3-201ENST00000295324 5700 ntAPPRIS P1 TSL 1 (best) BASIC15.05■□□□□ -0
TRAV34A0A0B4J273 ATXN7-210ENST00000487717 3683 ntAPPRIS P3 TSL 5 BASIC15.05■□□□□ -0
TRAV34A0A0B4J273 CDC37L1-202ENST00000381858 1244 ntTSL 5 BASIC15.05■□□□□ -0
TRAV34A0A0B4J273 C4orf48-201ENST00000409248 433 ntAPPRIS ALT2 TSL 1 (best) BASIC15.05■□□□□ -0
TRAV34A0A0B4J273 C4orf48-202ENST00000409860 477 ntAPPRIS P3 TSL 1 (best) BASIC15.05■□□□□ -0
TRAV34A0A0B4J273 AL355877.1-204ENST00000451482 1078 ntTSL 1 (best) BASIC15.05■□□□□ -0
TRAV34A0A0B4J273 AL354811.1-201ENST00000610286 706 ntBASIC15.05■□□□□ -0
TRAV34A0A0B4J273 MMP28-203ENST00000612672 1092 ntTSL 1 (best) BASIC15.05■□□□□ -0
TRAV34A0A0B4J273 FGF8-207ENST00000618991 856 ntTSL 3 BASIC15.05■□□□□ -0
TRAV34A0A0B4J273 MIR6084-201ENST00000622012 110 ntBASIC15.05■□□□□ -0
TRAV34A0A0B4J273 ITGA7-201ENST00000257879 4120 ntAPPRIS P3 TSL 1 (best) BASIC15.05■□□□□ -0
TRAV34A0A0B4J273 RASA4CP-201ENST00000424092 1398 ntBASIC15.05■□□□□ -0
TRAV34A0A0B4J273 ZBTB10-203ENST00000430430 10132 ntAPPRIS P3 TSL 5 BASIC15.05■□□□□ -0
TRAV34A0A0B4J273 ATF5-202ENST00000595125 1637 ntAPPRIS P1 TSL 2 BASIC15.05■□□□□ -0
TRAV34A0A0B4J273 TEX45-201ENST00000361664 1679 ntAPPRIS P2 TSL 1 (best) BASIC15.05■□□□□ -0
TRAV34A0A0B4J273 CELF6-202ENST00000395258 1741 ntTSL 5 BASIC15.05■□□□□ -0
TRAV34A0A0B4J273 ERO1A-201ENST00000395686 5285 ntAPPRIS P1 TSL 1 (best) BASIC15.05■□□□□ -0
TRAV34A0A0B4J273 YBX3-201ENST00000228251 1796 ntAPPRIS P3 TSL 1 (best) BASIC15.05■□□□□ -0
TRAV34A0A0B4J273 ETV7-206ENST00000615781 1776 ntTSL 1 (best) BASIC15.05■□□□□ -0
TRAV34A0A0B4J273 LINC01356-201ENST00000401018 1819 ntTSL 2 BASIC15.05■□□□□ -0
TRAV34A0A0B4J273 AMZ1-202ENST00000407112 1862 ntTSL 2 BASIC15.05■□□□□ -0
TRAV34A0A0B4J273 RGMA-208ENST00000556658 1889 ntTSL 1 (best) BASIC15.05■□□□□ -0
TRAV34A0A0B4J273 PRMT2-206ENST00000397638 2131 ntAPPRIS P1 TSL 1 (best) BASIC15.05■□□□□ -0
TRAV34A0A0B4J273 C19orf25-207ENST00000588871 2128 ntTSL 5 BASIC15.05■□□□□ -0
TRAV34A0A0B4J273 BTD-202ENST00000383778 2261 ntAPPRIS ALT2 TSL 2 BASIC15.05■□□□□ -0
TRAV34A0A0B4J273 SLC22A17-204ENST00000397267 2455 ntAPPRIS P4 TSL 5 BASIC15.05■□□□□ -0
TRAV34A0A0B4J273 MCCC1-201ENST00000265594 2545 ntAPPRIS P1 TSL 1 (best) BASIC15.05■□□□□ -0
TRAV34A0A0B4J273 PDE8A-202ENST00000339708 2663 ntAPPRIS ALT2 TSL 1 (best) BASIC15.05■□□□□ -0
TRAV34A0A0B4J273 FAM234A-203ENST00000399932 3213 ntAPPRIS P1 TSL 1 (best) BASIC15.05■□□□□ -0
TRAV34A0A0B4J273 FAM214B-206ENST00000603301 3256 ntAPPRIS P1 TSL 1 (best) BASIC15.05■□□□□ -0
TRAV34A0A0B4J273 PCDHA5-202ENST00000529859 5218 ntAPPRIS P1 TSL 1 (best) BASIC15.05■□□□□ -0
TRAV34A0A0B4J273 SHISA6-202ENST00000409168 7262 ntAPPRIS ALT2 TSL 1 (best) BASIC15.04■□□□□ -0
TRAV34A0A0B4J273 SCARB2-201ENST00000264896 4792 ntAPPRIS P2 TSL 1 (best) BASIC15.04■□□□□ -0
TRAV34A0A0B4J273 TLK2-201ENST00000326270 3512 ntTSL 1 (best) BASIC15.04■□□□□ -0
TRAV34A0A0B4J273 PDP1-208ENST00000520728 2554 ntAPPRIS P3 TSL 1 (best) BASIC15.04■□□□□ -0
TRAV34A0A0B4J273 SEMA6D-205ENST00000389425 2318 ntTSL 1 (best) BASIC15.04■□□□□ -0
TRAV34A0A0B4J273 CALM3-201ENST00000291295 2289 ntAPPRIS P1 TSL 1 (best) BASIC15.04■□□□□ -0
TRAV34A0A0B4J273 VMAC-201ENST00000339485 2254 ntAPPRIS P1 TSL 1 (best) BASIC15.04■□□□□ -0
TRAV34A0A0B4J273 ZBTB7B-201ENST00000292176 2129 ntAPPRIS P3 TSL 1 (best) BASIC15.04■□□□□ -0
TRAV34A0A0B4J273 DCAF17-211ENST00000539783 5623 ntAPPRIS ALT2 TSL 5 BASIC15.04■□□□□ -0
TRAV34A0A0B4J273 OGFOD2-201ENST00000228922 1780 ntAPPRIS P1 TSL 1 (best) BASIC15.04■□□□□ -0
TRAV34A0A0B4J273 ALG1-202ENST00000544428 1419 ntTSL 2 BASIC15.04■□□□□ -0
TRAV34A0A0B4J273 CENPS-CORT-204ENST00000602296 1326 ntTSL 3 BASIC15.04■□□□□ -0
TRAV34A0A0B4J273 AL358852.1-201ENST00000623174 1268 ntBASIC15.04■□□□□ -0
TRAV34A0A0B4J273 AC018470.1-201ENST00000624790 3129 ntBASIC15.04■□□□□ -0
TRAV34A0A0B4J273 GORASP1-206ENST00000422110 2523 ntTSL 2 BASIC15.04■□□□□ -0
Retrieved 100 of 98,524 protein–RNA pairs in 20.5 ms