Protein–RNA interactions for Protein: A0A0B4J234

TRAV2, T-cell receptor alpha variable 2 (Fragment), humanhuman

Predictions only

Length 112 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRAV2A0A0B4J234 IFI6-203ENST00000362020 828 ntAPPRIS ALT2 TSL 1 (best) BASIC14.75□□□□□ -0.05
TRAV2A0A0B4J234 FKBP2-202ENST00000394540 1002 ntAPPRIS P1 TSL 1 (best) BASIC14.75□□□□□ -0.05
TRAV2A0A0B4J234 ESRRAP1-201ENST00000400596 1257 ntBASIC14.75□□□□□ -0.05
TRAV2A0A0B4J234 CCDC107-206ENST00000426546 1242 ntAPPRIS P3 TSL 1 (best) BASIC14.75□□□□□ -0.05
TRAV2A0A0B4J234 ZNF436-AS1-202ENST00000437367 606 ntTSL 2 BASIC14.75□□□□□ -0.05
TRAV2A0A0B4J234 LINC00969-218ENST00000452844 583 ntTSL 3 BASIC14.75□□□□□ -0.05
TRAV2A0A0B4J234 LINC00969-221ENST00000457233 1279 ntTSL 1 (best) BASIC14.75□□□□□ -0.05
TRAV2A0A0B4J234 FAM163B-202ENST00000496132 811 ntAPPRIS P1 TSL 3 BASIC14.75□□□□□ -0.05
TRAV2A0A0B4J234 ADM-205ENST00000528544 586 ntTSL 2 BASIC14.75□□□□□ -0.05
TRAV2A0A0B4J234 CAPN5-206ENST00000531028 534 ntTSL 5 BASIC14.75□□□□□ -0.05
TRAV2A0A0B4J234 FXYD1-204ENST00000588081 645 ntAPPRIS P1 TSL 1 (best) BASIC14.75□□□□□ -0.05
TRAV2A0A0B4J234 PDZD3-201ENST00000322712 2204 ntTSL 1 (best) BASIC14.75□□□□□ -0.05
TRAV2A0A0B4J234 DMPK-205ENST00000458663 2548 ntTSL 5 BASIC14.75□□□□□ -0.05
TRAV2A0A0B4J234 AP006587.1-201ENST00000534129 1502 ntBASIC14.75□□□□□ -0.05
TRAV2A0A0B4J234 PUF60-202ENST00000349157 1821 ntAPPRIS ALT2 TSL 1 (best) BASIC14.75□□□□□ -0.05
TRAV2A0A0B4J234 DUT-201ENST00000331200 2147 ntTSL 1 (best) BASIC14.75□□□□□ -0.05
TRAV2A0A0B4J234 MORF4L2-AS1-201ENST00000435306 2086 ntTSL 1 (best) BASIC14.75□□□□□ -0.05
TRAV2A0A0B4J234 KCNN2-207ENST00000610748 2091 ntTSL 3 BASIC14.75□□□□□ -0.05
TRAV2A0A0B4J234 RAB34-204ENST00000395245 1766 ntAPPRIS P1 TSL 1 (best) BASIC14.75□□□□□ -0.05
TRAV2A0A0B4J234 CYB561-204ENST00000448884 1496 ntTSL 2 BASIC14.75□□□□□ -0.05
TRAV2A0A0B4J234 LRRC42-203ENST00000371370 2037 ntAPPRIS P1 TSL 2 BASIC14.75□□□□□ -0.05
TRAV2A0A0B4J234 EARS2-206ENST00000563232 1709 ntTSL 1 (best) BASIC14.75□□□□□ -0.05
TRAV2A0A0B4J234 MPV17L2-204ENST00000599612 1408 ntAPPRIS P1 TSL 1 (best) BASIC14.75□□□□□ -0.05
TRAV2A0A0B4J234 AGAP2-201ENST00000257897 5388 ntAPPRIS P3 TSL 1 (best) BASIC14.74□□□□□ -0.05
TRAV2A0A0B4J234 EIF5-201ENST00000216554 5945 ntAPPRIS P1 TSL 1 (best) BASIC14.74□□□□□ -0.05
TRAV2A0A0B4J234 CDCA4-201ENST00000336219 2513 ntAPPRIS P1 TSL 1 (best) BASIC14.74□□□□□ -0.05
TRAV2A0A0B4J234 STK16-201ENST00000396738 1673 ntAPPRIS P1 TSL 2 BASIC14.74□□□□□ -0.05
TRAV2A0A0B4J234 GRK4-203ENST00000398052 2202 ntAPPRIS P1 TSL 1 (best) BASIC14.74□□□□□ -0.05
TRAV2A0A0B4J234 CRHR1-203ENST00000339069 2490 ntTSL 2 BASIC14.74□□□□□ -0.05
TRAV2A0A0B4J234 EIF4G3-214ENST00000634879 5325 ntTSL 5 BASIC14.74□□□□□ -0.05
TRAV2A0A0B4J234 DYNC1LI2-201ENST00000258198 4515 ntAPPRIS P1 TSL 1 (best) BASIC14.74□□□□□ -0.05
TRAV2A0A0B4J234 DDX31-206ENST00000480876 1333 ntTSL 1 (best) BASIC14.74□□□□□ -0.05
TRAV2A0A0B4J234 P4HB-201ENST00000331483 2603 ntAPPRIS P1 TSL 1 (best) BASIC14.74□□□□□ -0.05
TRAV2A0A0B4J234 NDUFV3-202ENST00000354250 1575 ntTSL 1 (best) BASIC14.74□□□□□ -0.05
TRAV2A0A0B4J234 LBX2-AS1-202ENST00000603175 2083 ntBASIC14.74□□□□□ -0.05
TRAV2A0A0B4J234 ADCY9-201ENST00000294016 7725 ntAPPRIS P1 TSL 1 (best) BASIC14.74□□□□□ -0.05
TRAV2A0A0B4J234 HOXA6-201ENST00000222728 989 ntAPPRIS P1 TSL 1 (best) BASIC14.74□□□□□ -0.05
TRAV2A0A0B4J234 SERF1A-201ENST00000317633 963 ntAPPRIS P1 TSL 1 (best) BASIC14.74□□□□□ -0.05
TRAV2A0A0B4J234 CLTA-202ENST00000345519 1073 ntAPPRIS ALT1 TSL 1 (best) BASIC14.74□□□□□ -0.05
TRAV2A0A0B4J234 FAM167B-201ENST00000373582 936 ntAPPRIS P1 TSL 1 (best) BASIC14.74□□□□□ -0.05
TRAV2A0A0B4J234 AGTRAP-203ENST00000376629 1100 ntAPPRIS ALT2 TSL 1 (best) BASIC14.74□□□□□ -0.05
TRAV2A0A0B4J234 TRA2B-203ENST00000382191 976 ntTSL 2 BASIC14.74□□□□□ -0.05
TRAV2A0A0B4J234 INS-203ENST00000397262 639 ntAPPRIS P1 TSL 1 (best) BASIC14.74□□□□□ -0.05
TRAV2A0A0B4J234 AC069185.1-201ENST00000531395 811 ntTSL 3 BASIC14.74□□□□□ -0.05
TRAV2A0A0B4J234 AC073912.1-201ENST00000546264 587 ntTSL 3 BASIC14.74□□□□□ -0.05
TRAV2A0A0B4J234 PNN-205ENST00000556530 601 ntTSL 2 BASIC14.74□□□□□ -0.05
TRAV2A0A0B4J234 AC069544.1-201ENST00000609399 999 ntBASIC14.74□□□□□ -0.05
TRAV2A0A0B4J234 C20orf204-205ENST00000636176 961 ntAPPRIS P5 TSL 5 BASIC14.74□□□□□ -0.05
TRAV2A0A0B4J234 APTR-204ENST00000440088 2029 ntTSL 1 (best) BASIC14.74□□□□□ -0.05
TRAV2A0A0B4J234 HOXA11-201ENST00000006015 2295 ntAPPRIS P1 TSL 1 (best) BASIC14.74□□□□□ -0.05
TRAV2A0A0B4J234 NRXN1-226ENST00000626899 2543 ntTSL 2 BASIC14.74□□□□□ -0.05
TRAV2A0A0B4J234 PML-204ENST00000359928 1726 ntTSL 1 (best) BASIC14.74□□□□□ -0.05
TRAV2A0A0B4J234 PPM1H-201ENST00000228705 6353 ntAPPRIS P1 TSL 1 (best) BASIC14.74□□□□□ -0.05
TRAV2A0A0B4J234 TXNRD2-203ENST00000400519 3155 ntAPPRIS ALT2 TSL 1 (best) BASIC14.74□□□□□ -0.05
TRAV2A0A0B4J234 TAL1-202ENST00000371884 4642 ntAPPRIS P1 TSL 1 (best) BASIC14.74□□□□□ -0.05
TRAV2A0A0B4J234 PQLC2-201ENST00000375153 2153 ntAPPRIS P1 TSL 2 BASIC14.74□□□□□ -0.05
TRAV2A0A0B4J234 MAPK9-207ENST00000452135 4815 ntAPPRIS P5 TSL 5 BASIC14.74□□□□□ -0.05
TRAV2A0A0B4J234 SRSF4-201ENST00000373795 2387 ntAPPRIS P2 TSL 1 (best) BASIC14.74□□□□□ -0.05
TRAV2A0A0B4J234 MAEA-208ENST00000505839 1444 ntTSL 2 BASIC14.74□□□□□ -0.05
TRAV2A0A0B4J234 ASB16-201ENST00000293414 2139 ntAPPRIS P1 TSL 1 (best) BASIC14.74□□□□□ -0.05
TRAV2A0A0B4J234 PARP2-202ENST00000429687 1881 ntAPPRIS ALT2 TSL 1 (best) BASIC14.74□□□□□ -0.05
TRAV2A0A0B4J234 RBPJL-203ENST00000372743 1623 ntAPPRIS ALT1 TSL 1 (best) BASIC14.74□□□□□ -0.05
TRAV2A0A0B4J234 HDAC2-201ENST00000368632 2084 ntTSL 2 BASIC14.73□□□□□ -0.05
TRAV2A0A0B4J234 HS3ST4-201ENST00000331351 3203 ntAPPRIS P1 TSL 1 (best) BASIC14.73□□□□□ -0.05
TRAV2A0A0B4J234 COL27A1-201ENST00000356083 7790 ntAPPRIS P1 TSL 1 (best) BASIC14.73□□□□□ -0.05
TRAV2A0A0B4J234 CLN8-208ENST00000635751 1807 ntAPPRIS P1 TSL 5 BASIC14.73□□□□□ -0.05
TRAV2A0A0B4J234 RAX-202ENST00000334889 3197 ntAPPRIS P1 TSL 1 (best) BASIC14.73□□□□□ -0.05
TRAV2A0A0B4J234 TXNRD2-202ENST00000400518 2025 ntAPPRIS ALT2 TSL 1 (best) BASIC14.73□□□□□ -0.05
TRAV2A0A0B4J234 SETD7-202ENST00000404104 1590 ntTSL 2 BASIC14.73□□□□□ -0.05
TRAV2A0A0B4J234 DMPK-203ENST00000354227 1982 ntTSL 2 BASIC14.73□□□□□ -0.05
TRAV2A0A0B4J234 SPOCK3-215ENST00000510741 1963 ntAPPRIS ALT2 TSL 5 BASIC14.73□□□□□ -0.05
TRAV2A0A0B4J234 TINCR-201ENST00000448587 3733 ntAPPRIS P1 TSL 1 (best) BASIC14.73□□□□□ -0.05
TRAV2A0A0B4J234 ART5-203ENST00000397068 1504 ntAPPRIS P1 TSL 1 (best) BASIC14.73□□□□□ -0.05
TRAV2A0A0B4J234 UBE2QL1-201ENST00000399816 4317 ntAPPRIS P1 TSL 1 (best) BASIC14.73□□□□□ -0.05
TRAV2A0A0B4J234 TMPO-204ENST00000393053 2374 ntTSL 1 (best) BASIC14.73□□□□□ -0.05
TRAV2A0A0B4J234 OSR2-202ENST00000435298 1736 ntTSL 1 (best) BASIC14.73□□□□□ -0.05
TRAV2A0A0B4J234 KRT87P-201ENST00000529785 1700 ntTSL 2 BASIC14.73□□□□□ -0.05
TRAV2A0A0B4J234 SMARCD1-201ENST00000381513 3237 ntTSL 1 (best) BASIC14.73□□□□□ -0.05
TRAV2A0A0B4J234 AGAP5-203ENST00000581191 2779 ntAPPRIS ALT2 TSL 5 BASIC14.73□□□□□ -0.05
TRAV2A0A0B4J234 CDC14B-203ENST00000375242 2965 ntTSL 2 BASIC14.73□□□□□ -0.05
TRAV2A0A0B4J234 MCHR1-202ENST00000381433 1219 ntTSL 1 (best) BASIC14.73□□□□□ -0.05
TRAV2A0A0B4J234 NME1-207ENST00000480143 964 ntTSL 2 BASIC14.73□□□□□ -0.05
TRAV2A0A0B4J234 CA3-AS1-201ENST00000517697 559 ntTSL 4 BASIC14.73□□□□□ -0.05
TRAV2A0A0B4J234 BAALC-AS1-206ENST00000521383 736 ntTSL 3 BASIC14.73□□□□□ -0.05
TRAV2A0A0B4J234 ZNF771-202ENST00000434417 1454 ntAPPRIS P1 TSL 2 BASIC14.73□□□□□ -0.05
TRAV2A0A0B4J234 HEMK1-206ENST00000455834 1499 ntAPPRIS P1 TSL 5 BASIC14.73□□□□□ -0.05
TRAV2A0A0B4J234 MAF1-201ENST00000322428 1677 ntAPPRIS P1 TSL 1 (best) BASIC14.73□□□□□ -0.05
TRAV2A0A0B4J234 ZGPAT-203ENST00000357119 1896 ntTSL 1 (best) BASIC14.73□□□□□ -0.05
TRAV2A0A0B4J234 SENP5-204ENST00000445299 2491 ntTSL 2 BASIC14.73□□□□□ -0.05
TRAV2A0A0B4J234 TPPP3-204ENST00000562206 1410 ntAPPRIS P1 TSL 2 BASIC14.73□□□□□ -0.05
TRAV2A0A0B4J234 WDTC1-201ENST00000319394 4819 ntAPPRIS ALT1 TSL 1 (best) BASIC14.73□□□□□ -0.05
TRAV2A0A0B4J234 RAB11FIP4-201ENST00000394744 1968 ntTSL 2 BASIC14.73□□□□□ -0.05
TRAV2A0A0B4J234 FAM216A-201ENST00000377673 1582 ntAPPRIS P1 TSL 1 (best) BASIC14.73□□□□□ -0.05
TRAV2A0A0B4J234 ZNF346-209ENST00000512315 1575 ntTSL 2 BASIC14.73□□□□□ -0.05
TRAV2A0A0B4J234 PHF12-205ENST00000577226 7679 ntTSL 1 (best) BASIC14.73□□□□□ -0.05
TRAV2A0A0B4J234 ZNF302-215ENST00000627982 1723 ntAPPRIS ALT2 TSL 5 BASIC14.72□□□□□ -0.05
TRAV2A0A0B4J234 ZSCAN1-201ENST00000282326 2054 ntAPPRIS P1 TSL 2 BASIC14.72□□□□□ -0.05
TRAV2A0A0B4J234 KLHDC4-201ENST00000270583 1886 ntAPPRIS P3 TSL 1 (best) BASIC14.72□□□□□ -0.05
TRAV2A0A0B4J234 TRMT2A-201ENST00000252136 2964 ntAPPRIS P3 TSL 1 (best) BASIC14.72□□□□□ -0.05
TRAV2A0A0B4J234 LINC00304-201ENST00000321214 2243 ntTSL 2 BASIC14.72□□□□□ -0.05
Retrieved 100 of 98,524 protein–RNA pairs in 25.9 ms