Protein–RNA interactions for Protein: Q9Y5F7

PCDHGC4, Protocadherin gamma-C4, humanhuman

Predictions only

Length 938 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PCDHGC4Q9Y5F7 AP004833.2-201ENST00000532228 1454 ntBASIC25.99■■□□□ 1.75
PCDHGC4Q9Y5F7 PDCD2-209ENST00000542896 1082 ntTSL 2 BASIC25.99■■□□□ 1.75
PCDHGC4Q9Y5F7 U2AF2-206ENST00000590551 1104 ntTSL 3 BASIC25.99■■□□□ 1.75
PCDHGC4Q9Y5F7 LINC01971-201ENST00000617888 1048 ntBASIC25.99■■□□□ 1.75
PCDHGC4Q9Y5F7 MTCH1-202ENST00000373627 2057 ntAPPRIS P1 TSL 1 (best) BASIC25.99■■□□□ 1.75
PCDHGC4Q9Y5F7 ITPKA-201ENST00000260386 1824 ntAPPRIS P1 TSL 1 (best) BASIC25.98■■□□□ 1.75
PCDHGC4Q9Y5F7 AP000251.1-201ENST00000433071 822 ntTSL 1 (best) BASIC25.98■■□□□ 1.75
PCDHGC4Q9Y5F7 SLC30A10-202ENST00000366926 1915 ntAPPRIS P1 TSL 1 (best) BASIC25.98■■□□□ 1.75
PCDHGC4Q9Y5F7 MARCKSL1-201ENST00000329421 1699 ntAPPRIS P1 TSL 1 (best) BASIC25.97■■□□□ 1.75
PCDHGC4Q9Y5F7 PHF20L1-207ENST00000395379 1998 ntTSL 5 BASIC25.97■■□□□ 1.75
PCDHGC4Q9Y5F7 EID2-201ENST00000390658 1629 ntAPPRIS P1 BASIC25.97■■□□□ 1.75
PCDHGC4Q9Y5F7 SECTM1-201ENST00000269389 2235 ntAPPRIS P2 TSL 1 (best) BASIC25.96■■□□□ 1.75
PCDHGC4Q9Y5F7 SLC35D2-201ENST00000253270 1613 ntAPPRIS P1 TSL 1 (best) BASIC25.96■■□□□ 1.75
PCDHGC4Q9Y5F7 COL13A1-214ENST00000522165 2061 ntAPPRIS ALT2 TSL 5 BASIC25.96■■□□□ 1.75
PCDHGC4Q9Y5F7 MTMR1-214ENST00000542156 1227 ntTSL 1 (best) BASIC25.96■■□□□ 1.75
PCDHGC4Q9Y5F7 TESK1-206ENST00000620767 2438 ntAPPRIS P1 TSL 5 BASIC25.96■■□□□ 1.75
PCDHGC4Q9Y5F7 TPRA1-209ENST00000489960 1903 ntAPPRIS P1 TSL 5 BASIC25.96■■□□□ 1.75
PCDHGC4Q9Y5F7 ARHGAP22-202ENST00000374170 2107 ntTSL 5 BASIC25.95■■□□□ 1.74
PCDHGC4Q9Y5F7 MAPK13-201ENST00000211287 2052 ntAPPRIS P1 TSL 1 (best) BASIC25.95■■□□□ 1.74
PCDHGC4Q9Y5F7 BIN1-204ENST00000348750 2074 ntTSL 1 (best) BASIC25.95■■□□□ 1.74
PCDHGC4Q9Y5F7 DUX4L11-201ENST00000611504 1267 ntBASIC25.94■■□□□ 1.74
PCDHGC4Q9Y5F7 DUX4L12-201ENST00000614593 1267 ntBASIC25.94■■□□□ 1.74
PCDHGC4Q9Y5F7 DUX4L14-201ENST00000621227 1267 ntBASIC25.94■■□□□ 1.74
PCDHGC4Q9Y5F7 MKRN1-202ENST00000443720 1601 ntAPPRIS ALT2 TSL 1 (best) BASIC25.94■■□□□ 1.74
PCDHGC4Q9Y5F7 PPP1CC-208ENST00000551676 1581 ntTSL 2 BASIC25.94■■□□□ 1.74
PCDHGC4Q9Y5F7 RASL10A-202ENST00000401450 1720 ntTSL 2 BASIC25.94■■□□□ 1.74
PCDHGC4Q9Y5F7 SLC16A8-201ENST00000320521 1878 ntAPPRIS P1 TSL 1 (best) BASIC25.94■■□□□ 1.74
PCDHGC4Q9Y5F7 F8A3-201ENST00000622749 1759 ntAPPRIS P1 BASIC25.93■■□□□ 1.74
PCDHGC4Q9Y5F7 ANKS1B-203ENST00000341752 2115 ntTSL 2 BASIC25.93■■□□□ 1.74
PCDHGC4Q9Y5F7 MPP6-203ENST00000409761 1703 ntTSL 5 BASIC25.92■■□□□ 1.74
PCDHGC4Q9Y5F7 NKX2-1-204ENST00000522719 1417 ntAPPRIS P1 TSL 1 (best) BASIC25.92■■□□□ 1.74
PCDHGC4Q9Y5F7 PVT1-219ENST00000523427 938 ntTSL 3 BASIC25.92■■□□□ 1.74
PCDHGC4Q9Y5F7 AC100797.4-201ENST00000631653 1827 ntBASIC25.91■■□□□ 1.74
PCDHGC4Q9Y5F7 FKBP1A-210ENST00000614856 562 ntTSL 2 BASIC25.91■■□□□ 1.74
PCDHGC4Q9Y5F7 CIB2-201ENST00000258930 1598 ntAPPRIS P1 TSL 1 (best) BASIC25.9■■□□□ 1.74
PCDHGC4Q9Y5F7 RUNX2-203ENST00000371436 1588 ntAPPRIS ALT2 TSL 5 BASIC25.9■■□□□ 1.74
PCDHGC4Q9Y5F7 MAZ-205ENST00000562337 1574 ntTSL 3 BASIC25.9■■□□□ 1.74
PCDHGC4Q9Y5F7 MAPK8IP1P1-201ENST00000574657 1439 ntBASIC25.9■■□□□ 1.74
PCDHGC4Q9Y5F7 ZDHHC16-201ENST00000345745 1519 ntTSL 1 (best) BASIC25.9■■□□□ 1.74
PCDHGC4Q9Y5F7 C2orf88-204ENST00000409870 1441 ntAPPRIS P1 TSL 2 BASIC25.89■■□□□ 1.74
PCDHGC4Q9Y5F7 RPUSD1-208ENST00000567114 1835 ntTSL 2 BASIC25.89■■□□□ 1.74
PCDHGC4Q9Y5F7 TPRA1-202ENST00000355552 1933 ntAPPRIS P1 TSL 1 (best) BASIC25.89■■□□□ 1.74
PCDHGC4Q9Y5F7 C5orf66-AS1-201ENST00000507035 843 ntTSL 2 BASIC25.89■■□□□ 1.74
PCDHGC4Q9Y5F7 C11orf95-204ENST00000546282 390 ntTSL 3 BASIC25.89■■□□□ 1.74
PCDHGC4Q9Y5F7 FHL2-202ENST00000344213 1769 ntTSL 1 (best) BASIC25.89■■□□□ 1.73
PCDHGC4Q9Y5F7 ST6GALNAC6-203ENST00000373142 2448 ntTSL 1 (best) BASIC25.88■■□□□ 1.73
PCDHGC4Q9Y5F7 CHST14-202ENST00000559991 1968 ntTSL 5 BASIC25.88■■□□□ 1.73
PCDHGC4Q9Y5F7 RNF166-209ENST00000567844 633 ntTSL 5 BASIC25.88■■□□□ 1.73
PCDHGC4Q9Y5F7 AC013394.1-201ENST00000629685 808 ntAPPRIS P1 TSL 5 BASIC25.88■■□□□ 1.73
PCDHGC4Q9Y5F7 LDLRAD4-218ENST00000592991 1640 ntTSL 1 (best) BASIC25.88■■□□□ 1.73
PCDHGC4Q9Y5F7 SDCCAG3-201ENST00000298537 2314 ntTSL 1 (best) BASIC25.87■■□□□ 1.73
PCDHGC4Q9Y5F7 FKBP1A-205ENST00000439640 1583 ntTSL 3 BASIC25.87■■□□□ 1.73
PCDHGC4Q9Y5F7 MEST-211ENST00000437945 1455 ntTSL 5 BASIC25.87■■□□□ 1.73
PCDHGC4Q9Y5F7 EFNA1-202ENST00000368407 1926 ntAPPRIS P1 TSL 1 (best) BASIC25.87■■□□□ 1.73
PCDHGC4Q9Y5F7 AC231981.1-201ENST00000450917 974 ntTSL 3 BASIC25.87■■□□□ 1.73
PCDHGC4Q9Y5F7 CHML-204ENST00000638121 920 ntTSL 2 BASIC25.87■■□□□ 1.73
PCDHGC4Q9Y5F7 RHOC-202ENST00000339083 1418 ntAPPRIS P1 TSL 1 (best) BASIC25.87■■□□□ 1.73
PCDHGC4Q9Y5F7 AC187653.1-201ENST00000506382 702 ntAPPRIS P1 TSL 5 BASIC25.86■■□□□ 1.73
PCDHGC4Q9Y5F7 AC027237.3-202ENST00000558617 1778 ntTSL 2 BASIC25.86■■□□□ 1.73
PCDHGC4Q9Y5F7 ADAP1-201ENST00000265846 2363 ntAPPRIS P1 TSL 1 (best) BASIC25.85■■□□□ 1.73
PCDHGC4Q9Y5F7 EBPL-201ENST00000242827 914 ntAPPRIS P1 TSL 1 (best) BASIC25.85■■□□□ 1.73
PCDHGC4Q9Y5F7 CLK2-201ENST00000355560 2120 ntAPPRIS ALT1 TSL 5 BASIC25.85■■□□□ 1.73
PCDHGC4Q9Y5F7 EXOC3L4-201ENST00000380069 2293 ntAPPRIS P1 TSL 1 (best) BASIC25.85■■□□□ 1.73
PCDHGC4Q9Y5F7 DPF1-202ENST00000412732 2303 ntTSL 1 (best) BASIC25.85■■□□□ 1.73
PCDHGC4Q9Y5F7 KANSL1L-207ENST00000452086 2334 ntTSL 1 (best) BASIC25.85■■□□□ 1.73
PCDHGC4Q9Y5F7 DUX4L13-201ENST00000554103 1267 ntBASIC25.84■■□□□ 1.73
PCDHGC4Q9Y5F7 DUX4L15-201ENST00000611059 1267 ntBASIC25.84■■□□□ 1.73
PCDHGC4Q9Y5F7 DUX4L23-201ENST00000615195 1269 ntBASIC25.84■■□□□ 1.73
PCDHGC4Q9Y5F7 DUX4L24-201ENST00000617576 1269 ntBASIC25.84■■□□□ 1.73
PCDHGC4Q9Y5F7 DUX4L22-201ENST00000618238 1269 ntBASIC25.84■■□□□ 1.73
PCDHGC4Q9Y5F7 DUX4L20-201ENST00000619712 1269 ntBASIC25.84■■□□□ 1.73
PCDHGC4Q9Y5F7 DUX4L21-201ENST00000622058 1269 ntBASIC25.84■■□□□ 1.73
PCDHGC4Q9Y5F7 DUX4L10-201ENST00000622460 1267 ntBASIC25.84■■□□□ 1.73
PCDHGC4Q9Y5F7 DUX4L25-201ENST00000624915 1269 ntBASIC25.84■■□□□ 1.73
PCDHGC4Q9Y5F7 PQLC1-203ENST00000397778 2555 ntAPPRIS P3 TSL 1 (best) BASIC25.84■■□□□ 1.73
PCDHGC4Q9Y5F7 SNX24-201ENST00000261369 2158 ntAPPRIS P1 TSL 1 (best) BASIC25.83■■□□□ 1.73
PCDHGC4Q9Y5F7 RANBP1-202ENST00000402752 1132 ntAPPRIS ALT1 TSL 1 (best) BASIC25.83■■□□□ 1.73
PCDHGC4Q9Y5F7 ZNF470-206ENST00000601902 1640 ntTSL 1 (best) BASIC25.83■■□□□ 1.73
PCDHGC4Q9Y5F7 RRAD-202ENST00000420652 1476 ntAPPRIS P1 TSL 1 (best) BASIC25.83■■□□□ 1.73
PCDHGC4Q9Y5F7 MYCL-202ENST00000372816 1688 ntAPPRIS P3 TSL 2 BASIC25.83■■□□□ 1.73
PCDHGC4Q9Y5F7 CLEC3B-202ENST00000428034 752 ntTSL 2 BASIC25.82■■□□□ 1.72
PCDHGC4Q9Y5F7 GSX2-202ENST00000503800 1181 ntTSL 5 BASIC25.82■■□□□ 1.72
PCDHGC4Q9Y5F7 EIF5A-202ENST00000336458 1511 ntAPPRIS P1 TSL 1 (best) BASIC25.82■■□□□ 1.72
PCDHGC4Q9Y5F7 WSB2-201ENST00000315436 2646 ntAPPRIS P1 TSL 1 (best) BASIC25.82■■□□□ 1.72
PCDHGC4Q9Y5F7 SHF-206ENST00000560471 2499 ntTSL 5 BASIC25.81■■□□□ 1.72
PCDHGC4Q9Y5F7 SHARPIN-202ENST00000398712 1765 ntAPPRIS P1 TSL 1 (best) BASIC25.81■■□□□ 1.72
PCDHGC4Q9Y5F7 TNFRSF25-205ENST00000377782 1632 ntAPPRIS P4 TSL 1 (best) BASIC25.81■■□□□ 1.72
PCDHGC4Q9Y5F7 GNAS-207ENST00000354359 1975 ntTSL 1 (best) BASIC25.8■■□□□ 1.72
PCDHGC4Q9Y5F7 GNAS-210ENST00000371085 1972 ntTSL 1 (best) BASIC25.8■■□□□ 1.72
PCDHGC4Q9Y5F7 RALY-201ENST00000246194 1789 ntAPPRIS P4 TSL 1 (best) BASIC25.79■■□□□ 1.72
PCDHGC4Q9Y5F7 THAP11-201ENST00000303596 2114 ntAPPRIS P1 BASIC25.79■■□□□ 1.72
PCDHGC4Q9Y5F7 CCNYL1-203ENST00000392209 1952 ntTSL 2 BASIC25.79■■□□□ 1.72
PCDHGC4Q9Y5F7 CR559946.2-201ENST00000623684 991 ntBASIC25.79■■□□□ 1.72
PCDHGC4Q9Y5F7 SLC35D2-203ENST00000375259 1361 ntTSL 1 (best) BASIC25.79■■□□□ 1.72
PCDHGC4Q9Y5F7 CAAP1-205ENST00000520187 773 ntTSL 5 BASIC25.78■■□□□ 1.72
PCDHGC4Q9Y5F7 MIR3648-2-201ENST00000581792 180 ntBASIC25.78■■□□□ 1.72
PCDHGC4Q9Y5F7 MIR3648-1-201ENST00000615959 180 ntBASIC25.78■■□□□ 1.72
PCDHGC4Q9Y5F7 GDI1-215ENST00000630693 786 ntTSL 4 BASIC25.78■■□□□ 1.72
PCDHGC4Q9Y5F7 P2RX2-203ENST00000350048 1344 ntTSL 1 (best) BASIC25.78■■□□□ 1.72
PCDHGC4Q9Y5F7 TESK1-201ENST00000336395 2421 ntAPPRIS P1 TSL 1 (best) BASIC25.78■■□□□ 1.72
Retrieved 100 of 98,524 protein–RNA pairs in 58.8 ms