Protein–RNA interactions for Protein: Q9Y5F0

PCDHB13, Protocadherin beta-13, humanhuman

Predictions only

Length 798 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PCDHB13Q9Y5F0 H2AFV-204ENST00000350771 687 ntTSL 2 BASIC28.32■■■□□ 2.12
PCDHB13Q9Y5F0 ZFAND2B-206ENST00000409336 944 ntAPPRIS P1 TSL 5 BASIC28.32■■■□□ 2.12
PCDHB13Q9Y5F0 MLEC-202ENST00000412616 841 ntTSL 3 BASIC28.32■■■□□ 2.12
PCDHB13Q9Y5F0 ZNF706-207ENST00000519882 959 ntAPPRIS P1 TSL 3 BASIC28.32■■■□□ 2.12
PCDHB13Q9Y5F0 ZNF706-213ENST00000521272 732 ntAPPRIS P1 TSL 5 BASIC28.32■■■□□ 2.12
PCDHB13Q9Y5F0 ZFAND2B-221ENST00000621130 1070 ntTSL 5 BASIC28.32■■■□□ 2.12
PCDHB13Q9Y5F0 MAZ-208ENST00000563402 1461 ntTSL 5 BASIC28.32■■■□□ 2.12
PCDHB13Q9Y5F0 MAZ-210ENST00000566906 1455 ntTSL 5 BASIC28.32■■■□□ 2.12
PCDHB13Q9Y5F0 INPP4A-203ENST00000409463 1565 ntTSL 1 (best) BASIC28.32■■■□□ 2.12
PCDHB13Q9Y5F0 FHL2-202ENST00000344213 1769 ntTSL 1 (best) BASIC28.32■■■□□ 2.12
PCDHB13Q9Y5F0 MRPL9-201ENST00000368829 882 ntAPPRIS ALT2 TSL 2 BASIC28.31■■■□□ 2.12
PCDHB13Q9Y5F0 AL589765.4-201ENST00000512280 382 ntTSL 3 BASIC28.31■■■□□ 2.12
PCDHB13Q9Y5F0 TNFSF12-201ENST00000293825 1553 ntAPPRIS P1 TSL 1 (best) BASIC28.31■■■□□ 2.12
PCDHB13Q9Y5F0 CHST14-202ENST00000559991 1968 ntTSL 5 BASIC28.31■■■□□ 2.12
PCDHB13Q9Y5F0 NKX2-1-204ENST00000522719 1417 ntAPPRIS P1 TSL 1 (best) BASIC28.3■■■□□ 2.12
PCDHB13Q9Y5F0 TRAM2-AS1-201ENST00000453216 664 ntTSL 3 BASIC28.3■■■□□ 2.12
PCDHB13Q9Y5F0 DNPEP-201ENST00000273075 2425 ntAPPRIS P3 TSL 1 (best) BASIC28.3■■■□□ 2.12
PCDHB13Q9Y5F0 TESK1-201ENST00000336395 2421 ntAPPRIS P1 TSL 1 (best) BASIC28.3■■■□□ 2.12
PCDHB13Q9Y5F0 MKRN1-202ENST00000443720 1601 ntAPPRIS ALT2 TSL 1 (best) BASIC28.29■■■□□ 2.12
PCDHB13Q9Y5F0 WHAMMP2-203ENST00000563942 1603 ntBASIC28.29■■■□□ 2.12
PCDHB13Q9Y5F0 LSM14B-204ENST00000370915 1079 ntTSL 1 (best) BASIC28.29■■■□□ 2.12
PCDHB13Q9Y5F0 ADAT3-201ENST00000329478 1620 ntAPPRIS P1 TSL 1 (best) BASIC28.29■■■□□ 2.12
PCDHB13Q9Y5F0 LZTS2-201ENST00000370220 5741 ntAPPRIS P1 TSL 1 (best) BASIC28.28■■■□□ 2.12
PCDHB13Q9Y5F0 TMEM251-202ENST00000415050 1303 ntTSL 2 BASIC28.28■■■□□ 2.12
PCDHB13Q9Y5F0 MPST-206ENST00000429360 1331 ntTSL 1 (best) BASIC28.28■■■□□ 2.12
PCDHB13Q9Y5F0 WSB2-201ENST00000315436 2646 ntAPPRIS P1 TSL 1 (best) BASIC28.28■■■□□ 2.12
PCDHB13Q9Y5F0 CIB2-201ENST00000258930 1598 ntAPPRIS P1 TSL 1 (best) BASIC28.28■■■□□ 2.12
PCDHB13Q9Y5F0 THAP11-201ENST00000303596 2114 ntAPPRIS P1 BASIC28.27■■■□□ 2.12
PCDHB13Q9Y5F0 FZD2-201ENST00000315323 2112 ntAPPRIS P1 BASIC28.27■■■□□ 2.12
PCDHB13Q9Y5F0 HSPB11-201ENST00000194214 915 ntAPPRIS P1 TSL 1 (best) BASIC28.27■■■□□ 2.12
PCDHB13Q9Y5F0 MEST-211ENST00000437945 1455 ntTSL 5 BASIC28.27■■■□□ 2.12
PCDHB13Q9Y5F0 CLK2-201ENST00000355560 2120 ntAPPRIS ALT1 TSL 5 BASIC28.27■■■□□ 2.12
PCDHB13Q9Y5F0 MARCKSL1-201ENST00000329421 1699 ntAPPRIS P1 TSL 1 (best) BASIC28.26■■■□□ 2.12
PCDHB13Q9Y5F0 AC116407.1-201ENST00000398832 1599 ntTSL 2 BASIC28.26■■■□□ 2.11
PCDHB13Q9Y5F0 WHRN-203ENST00000374057 1718 ntTSL 2 BASIC28.26■■■□□ 2.11
PCDHB13Q9Y5F0 RASL10A-202ENST00000401450 1720 ntTSL 2 BASIC28.26■■■□□ 2.11
PCDHB13Q9Y5F0 MYCL-202ENST00000372816 1688 ntAPPRIS P3 TSL 2 BASIC28.26■■■□□ 2.11
PCDHB13Q9Y5F0 ANKS1B-203ENST00000341752 2115 ntTSL 2 BASIC28.25■■■□□ 2.11
PCDHB13Q9Y5F0 FKBP1A-205ENST00000439640 1583 ntTSL 3 BASIC28.25■■■□□ 2.11
PCDHB13Q9Y5F0 COL13A1-213ENST00000520267 2276 ntAPPRIS ALT2 TSL 5 BASIC28.25■■■□□ 2.11
PCDHB13Q9Y5F0 REPIN1-204ENST00000466559 1022 ntTSL 1 (best) BASIC28.25■■■□□ 2.11
PCDHB13Q9Y5F0 SLC35A1-203ENST00000369557 1653 ntTSL 2 BASIC28.25■■■□□ 2.11
PCDHB13Q9Y5F0 MAZ-205ENST00000562337 1574 ntTSL 3 BASIC28.24■■■□□ 2.11
PCDHB13Q9Y5F0 ITGA9-203ENST00000422441 2282 ntTSL 1 (best) BASIC28.24■■■□□ 2.11
PCDHB13Q9Y5F0 SLC16A8-201ENST00000320521 1878 ntAPPRIS P1 TSL 1 (best) BASIC28.24■■■□□ 2.11
PCDHB13Q9Y5F0 ARHGDIG-201ENST00000219409 949 ntAPPRIS P1 TSL 1 (best) BASIC28.24■■■□□ 2.11
PCDHB13Q9Y5F0 TCAM1P-201ENST00000463377 452 ntTSL 3 BASIC28.24■■■□□ 2.11
PCDHB13Q9Y5F0 AL451007.3-201ENST00000640271 588 ntAPPRIS P1 BASIC28.24■■■□□ 2.11
PCDHB13Q9Y5F0 TNFRSF25-205ENST00000377782 1632 ntAPPRIS P4 TSL 1 (best) BASIC28.24■■■□□ 2.11
PCDHB13Q9Y5F0 AC100797.4-201ENST00000631653 1827 ntBASIC28.23■■■□□ 2.11
PCDHB13Q9Y5F0 RPUSD1-208ENST00000567114 1835 ntTSL 2 BASIC28.22■■■□□ 2.11
PCDHB13Q9Y5F0 SDCCAG3-201ENST00000298537 2314 ntTSL 1 (best) BASIC28.22■■■□□ 2.11
PCDHB13Q9Y5F0 IL17D-201ENST00000304920 1861 ntAPPRIS P1 TSL 1 (best) BASIC28.21■■■□□ 2.11
PCDHB13Q9Y5F0 MAPK8IP1P1-201ENST00000574657 1439 ntBASIC28.21■■■□□ 2.11
PCDHB13Q9Y5F0 ACTR3B-201ENST00000256001 2216 ntAPPRIS P1 TSL 1 (best) BASIC28.2■■■□□ 2.11
PCDHB13Q9Y5F0 KANSL1L-207ENST00000452086 2334 ntTSL 1 (best) BASIC28.19■■■□□ 2.1
PCDHB13Q9Y5F0 DERA-201ENST00000428559 1705 ntAPPRIS P1 TSL 1 (best) BASIC28.19■■■□□ 2.1
PCDHB13Q9Y5F0 UBALD1-202ENST00000587615 799 ntTSL 2 BASIC28.19■■■□□ 2.1
PCDHB13Q9Y5F0 HMCES-202ENST00000389735 1763 ntAPPRIS P1 TSL 1 (best) BASIC28.19■■■□□ 2.1
PCDHB13Q9Y5F0 GNAS-207ENST00000354359 1975 ntTSL 1 (best) BASIC28.19■■■□□ 2.1
PCDHB13Q9Y5F0 GNAS-210ENST00000371085 1972 ntTSL 1 (best) BASIC28.19■■■□□ 2.1
PCDHB13Q9Y5F0 ABHD17AP4-201ENST00000411545 909 ntBASIC28.18■■■□□ 2.1
PCDHB13Q9Y5F0 COMMD7-201ENST00000278980 1900 ntAPPRIS P3 TSL 1 (best) BASIC28.18■■■□□ 2.1
PCDHB13Q9Y5F0 ZNRF2P2-203ENST00000454624 420 ntBASIC28.17■■■□□ 2.1
PCDHB13Q9Y5F0 GNAS-211ENST00000371095 1931 ntAPPRIS ALT1 TSL 1 (best) BASIC28.17■■■□□ 2.1
PCDHB13Q9Y5F0 LDLRAD4-218ENST00000592991 1640 ntTSL 1 (best) BASIC28.17■■■□□ 2.1
PCDHB13Q9Y5F0 AP000251.1-201ENST00000433071 822 ntTSL 1 (best) BASIC28.16■■■□□ 2.1
PCDHB13Q9Y5F0 AC096888.1-201ENST00000487097 565 ntTSL 4 BASIC28.16■■■□□ 2.1
PCDHB13Q9Y5F0 DRD5P2-201ENST00000421395 2012 ntBASIC28.16■■■□□ 2.1
PCDHB13Q9Y5F0 EFNA1-202ENST00000368407 1926 ntAPPRIS P1 TSL 1 (best) BASIC28.16■■■□□ 2.1
PCDHB13Q9Y5F0 RALY-201ENST00000246194 1789 ntAPPRIS P4 TSL 1 (best) BASIC28.14■■■□□ 2.1
PCDHB13Q9Y5F0 AC027237.3-202ENST00000558617 1778 ntTSL 2 BASIC28.14■■■□□ 2.1
PCDHB13Q9Y5F0 ZDHHC16-201ENST00000345745 1519 ntTSL 1 (best) BASIC28.14■■■□□ 2.1
PCDHB13Q9Y5F0 LINC01971-201ENST00000617888 1048 ntBASIC28.14■■■□□ 2.1
PCDHB13Q9Y5F0 C2orf88-204ENST00000409870 1441 ntAPPRIS P1 TSL 2 BASIC28.14■■■□□ 2.1
PCDHB13Q9Y5F0 EIF5A-202ENST00000336458 1511 ntAPPRIS P1 TSL 1 (best) BASIC28.13■■■□□ 2.09
PCDHB13Q9Y5F0 LAPTM4B-203ENST00000521545 915 ntAPPRIS P1 TSL 1 (best) BASIC28.12■■■□□ 2.09
PCDHB13Q9Y5F0 DDN-AS1-203ENST00000552284 934 ntTSL 3 BASIC28.12■■■□□ 2.09
PCDHB13Q9Y5F0 ZNF470-206ENST00000601902 1640 ntTSL 1 (best) BASIC28.1■■■□□ 2.09
PCDHB13Q9Y5F0 BMP8A-201ENST00000331593 1692 ntAPPRIS P1 TSL 1 (best) BASIC28.1■■■□□ 2.09
PCDHB13Q9Y5F0 FTCD-201ENST00000291670 1905 ntAPPRIS P1 TSL 1 (best) BASIC28.1■■■□□ 2.09
PCDHB13Q9Y5F0 FKBP1A-210ENST00000614856 562 ntTSL 2 BASIC28.1■■■□□ 2.09
PCDHB13Q9Y5F0 CCNYL1-203ENST00000392209 1952 ntTSL 2 BASIC28.1■■■□□ 2.09
PCDHB13Q9Y5F0 SMARCD3-203ENST00000392811 2018 ntTSL 1 (best) BASIC28.09■■■□□ 2.09
PCDHB13Q9Y5F0 PLSCR3-209ENST00000574401 2032 ntAPPRIS P1 TSL 1 (best) BASIC28.09■■■□□ 2.09
PCDHB13Q9Y5F0 LACTB-201ENST00000261893 1972 ntAPPRIS P1 TSL 1 (best) BASIC28.09■■■□□ 2.09
PCDHB13Q9Y5F0 GSR-206ENST00000546342 1482 ntAPPRIS ALT2 TSL 1 (best) BASIC28.08■■■□□ 2.09
PCDHB13Q9Y5F0 PROC-203ENST00000409048 1586 ntTSL 5 BASIC28.07■■■□□ 2.08
PCDHB13Q9Y5F0 GSX2-202ENST00000503800 1181 ntTSL 5 BASIC28.07■■■□□ 2.08
PCDHB13Q9Y5F0 GPR75-ASB3-201ENST00000406625 2113 ntAPPRIS P1 TSL 2 BASIC28.06■■■□□ 2.08
PCDHB13Q9Y5F0 AC231981.1-201ENST00000450917 974 ntTSL 3 BASIC28.06■■■□□ 2.08
PCDHB13Q9Y5F0 C11orf95-204ENST00000546282 390 ntTSL 3 BASIC28.06■■■□□ 2.08
PCDHB13Q9Y5F0 ZDHHC23-206ENST00000498275 2055 ntAPPRIS ALT2 TSL 2 BASIC28.06■■■□□ 2.08
PCDHB13Q9Y5F0 EMID1-203ENST00000404820 2118 ntTSL 5 BASIC28.06■■■□□ 2.08
PCDHB13Q9Y5F0 RAB40C-201ENST00000248139 2699 ntAPPRIS P1 TSL 1 (best) BASIC28.05■■■□□ 2.08
PCDHB13Q9Y5F0 TBCC-201ENST00000372876 1616 ntAPPRIS P1 BASIC28.05■■■□□ 2.08
PCDHB13Q9Y5F0 MNX1-201ENST00000252971 2174 ntAPPRIS P3 TSL 1 (best) BASIC28.04■■■□□ 2.08
PCDHB13Q9Y5F0 AC142086.6-201ENST00000621154 1765 ntBASIC28.04■■■□□ 2.08
PCDHB13Q9Y5F0 HS3ST6-201ENST00000454677 1273 ntAPPRIS P1 TSL 1 (best) BASIC28.04■■■□□ 2.08
PCDHB13Q9Y5F0 GSX1-201ENST00000302945 1663 ntAPPRIS P1 TSL 1 (best) BASIC28.03■■■□□ 2.08
Retrieved 100 of 98,524 protein–RNA pairs in 48.7 ms