Protein–RNA interactions for Protein: Q9Y2X8

UBE2D4, Ubiquitin-conjugating enzyme E2 D4, humanhuman

Predictions only

Length 147 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
UBE2D4Q9Y2X8 MAGI2-215ENST00000628980 6212 ntTSL 5 BASIC17.81■□□□□ 0.44
UBE2D4Q9Y2X8 RHOC-208ENST00000369642 1355 ntAPPRIS P1 TSL 1 (best) BASIC17.81■□□□□ 0.44
UBE2D4Q9Y2X8 BATF3-201ENST00000243440 980 ntAPPRIS P1 TSL 1 (best) BASIC17.81■□□□□ 0.44
UBE2D4Q9Y2X8 CCNYL1-205ENST00000420822 952 ntTSL 1 (best) BASIC17.81■□□□□ 0.44
UBE2D4Q9Y2X8 MISP3-202ENST00000587086 1535 ntAPPRIS P2 TSL 1 (best) BASIC17.81■□□□□ 0.44
UBE2D4Q9Y2X8 ABL2-203ENST00000392043 2140 ntTSL 1 (best) BASIC17.81■□□□□ 0.44
UBE2D4Q9Y2X8 RTN2-202ENST00000344680 2063 ntAPPRIS P1 TSL 1 (best) BASIC17.81■□□□□ 0.44
UBE2D4Q9Y2X8 FAM220A-201ENST00000313324 2214 ntTSL 1 (best) BASIC17.8■□□□□ 0.44
UBE2D4Q9Y2X8 SSU72-201ENST00000291386 1290 ntAPPRIS P1 TSL 1 (best) BASIC17.8■□□□□ 0.44
UBE2D4Q9Y2X8 ATPAF1-201ENST00000329231 1241 ntTSL 2 BASIC17.8■□□□□ 0.44
UBE2D4Q9Y2X8 AL139393.1-201ENST00000417479 573 ntTSL 5 BASIC17.8■□□□□ 0.44
UBE2D4Q9Y2X8 HOXD-AS2-202ENST00000440016 999 ntTSL 5 BASIC17.8■□□□□ 0.44
UBE2D4Q9Y2X8 AC234582.1-201ENST00000447623 923 ntTSL 5 BASIC17.8■□□□□ 0.44
UBE2D4Q9Y2X8 ACAA1-220ENST00000627515 1862 ntTSL 5 BASIC17.8■□□□□ 0.44
UBE2D4Q9Y2X8 LGALS3-201ENST00000254301 1146 ntAPPRIS P1 TSL 1 (best) BASIC17.79■□□□□ 0.44
UBE2D4Q9Y2X8 ATRAID-201ENST00000380171 1240 ntTSL 1 (best) BASIC17.79■□□□□ 0.44
UBE2D4Q9Y2X8 AC127502.1-201ENST00000399971 1502 ntBASIC17.78■□□□□ 0.44
UBE2D4Q9Y2X8 AJAP1-201ENST00000378190 2383 ntAPPRIS P1 TSL 5 BASIC17.78■□□□□ 0.44
UBE2D4Q9Y2X8 CLK2-203ENST00000368361 2166 ntAPPRIS ALT1 TSL 1 (best) BASIC17.78■□□□□ 0.44
UBE2D4Q9Y2X8 PIK3R2-207ENST00000617130 2187 ntAPPRIS P1 TSL 1 (best) BASIC17.78■□□□□ 0.44
UBE2D4Q9Y2X8 PKDCC-201ENST00000294964 2502 ntAPPRIS P1 TSL 1 (best) BASIC17.77■□□□□ 0.44
UBE2D4Q9Y2X8 CACNG7-203ENST00000391767 2688 ntAPPRIS P1 TSL 5 BASIC17.77■□□□□ 0.44
UBE2D4Q9Y2X8 C11orf80-210ENST00000527634 1666 ntAPPRIS ALT2 TSL 5 BASIC17.77■□□□□ 0.43
UBE2D4Q9Y2X8 NKPD1-202ENST00000589776 1950 ntAPPRIS P1 BASIC17.77■□□□□ 0.43
UBE2D4Q9Y2X8 NR6A1-203ENST00000416460 1898 ntAPPRIS ALT2 TSL 1 (best) BASIC17.76■□□□□ 0.43
UBE2D4Q9Y2X8 FKBP1A-205ENST00000439640 1583 ntTSL 3 BASIC17.76■□□□□ 0.43
UBE2D4Q9Y2X8 CTSA-203ENST00000372459 1972 ntTSL 1 (best) BASIC17.76■□□□□ 0.43
UBE2D4Q9Y2X8 MTMR1-202ENST00000370390 2755 ntAPPRIS P1 TSL 1 (best) BASIC17.76■□□□□ 0.43
UBE2D4Q9Y2X8 DUSP14-206ENST00000617516 1537 ntAPPRIS P1 TSL 1 (best) BASIC17.76■□□□□ 0.43
UBE2D4Q9Y2X8 RASSF5-204ENST00000580449 1932 ntTSL 1 (best) BASIC17.76■□□□□ 0.43
UBE2D4Q9Y2X8 C1QTNF8-201ENST00000328449 1627 ntAPPRIS P1 TSL 5 BASIC17.76■□□□□ 0.43
UBE2D4Q9Y2X8 BCAP31-207ENST00000458587 1810 ntTSL 1 (best) BASIC17.75■□□□□ 0.43
UBE2D4Q9Y2X8 CCDC61-204ENST00000595358 1817 ntAPPRIS P2 TSL 5 BASIC17.75■□□□□ 0.43
UBE2D4Q9Y2X8 OXSR1-203ENST00000446845 1908 ntTSL 5 BASIC17.75■□□□□ 0.43
UBE2D4Q9Y2X8 IL13RA1-201ENST00000371642 1096 ntTSL 1 (best) BASIC17.75■□□□□ 0.43
UBE2D4Q9Y2X8 GSTP1-202ENST00000398606 965 ntAPPRIS P1 TSL 1 (best) BASIC17.75■□□□□ 0.43
UBE2D4Q9Y2X8 TAZ-205ENST00000475699 1862 ntTSL 1 (best) BASIC17.75■□□□□ 0.43
UBE2D4Q9Y2X8 KANSL2-215ENST00000553086 1830 ntTSL 5 BASIC17.75■□□□□ 0.43
UBE2D4Q9Y2X8 DPY19L1-209ENST00000638088 5075 ntAPPRIS ALT2 TSL 5 BASIC17.74■□□□□ 0.43
UBE2D4Q9Y2X8 DNAJB2-202ENST00000392086 1946 ntAPPRIS P1 TSL 2 BASIC17.74■□□□□ 0.43
UBE2D4Q9Y2X8 NOXA1-201ENST00000341349 1678 ntAPPRIS P1 TSL 1 (best) BASIC17.74■□□□□ 0.43
UBE2D4Q9Y2X8 SOX1-201ENST00000330949 2842 ntAPPRIS P1 BASIC17.74■□□□□ 0.43
UBE2D4Q9Y2X8 PLBD2-202ENST00000545182 2321 ntTSL 2 BASIC17.74■□□□□ 0.43
UBE2D4Q9Y2X8 LY6K-203ENST00000519387 963 ntAPPRIS ALT2 TSL 2 BASIC17.74■□□□□ 0.43
UBE2D4Q9Y2X8 TANGO2-214ENST00000447208 2086 ntTSL 3 BASIC17.74■□□□□ 0.43
UBE2D4Q9Y2X8 UCK1-204ENST00000372215 2167 ntAPPRIS P1 TSL 1 (best) BASIC17.74■□□□□ 0.43
UBE2D4Q9Y2X8 EBAG9-202ENST00000395785 1467 ntAPPRIS P1 TSL 1 (best) BASIC17.74■□□□□ 0.43
UBE2D4Q9Y2X8 AKAP8L-208ENST00000595465 1933 ntTSL 2 BASIC17.73■□□□□ 0.43
UBE2D4Q9Y2X8 PCBD2-201ENST00000254908 1223 ntAPPRIS P1 TSL 1 (best) BASIC17.73■□□□□ 0.43
UBE2D4Q9Y2X8 CIB1-201ENST00000328649 1247 ntAPPRIS P1 TSL 1 (best) BASIC17.73■□□□□ 0.43
UBE2D4Q9Y2X8 AC009133.5-201ENST00000562594 473 ntTSL 4 BASIC17.73■□□□□ 0.43
UBE2D4Q9Y2X8 CIB1-202ENST00000612800 1096 ntTSL 1 (best) BASIC17.73■□□□□ 0.43
UBE2D4Q9Y2X8 ZDHHC16-204ENST00000370842 1877 ntAPPRIS ALT1 TSL 5 BASIC17.73■□□□□ 0.43
UBE2D4Q9Y2X8 CCNYL1-203ENST00000392209 1952 ntTSL 2 BASIC17.73■□□□□ 0.43
UBE2D4Q9Y2X8 RFLNA-205ENST00000546355 2354 ntAPPRIS ALT1 TSL 1 (best) BASIC17.73■□□□□ 0.43
UBE2D4Q9Y2X8 DHRS13-201ENST00000378895 1921 ntAPPRIS P1 TSL 1 (best) BASIC17.72■□□□□ 0.43
UBE2D4Q9Y2X8 RHOQ-201ENST00000238738 2975 ntAPPRIS P1 TSL 1 (best) BASIC17.72■□□□□ 0.43
UBE2D4Q9Y2X8 GSX1-201ENST00000302945 1663 ntAPPRIS P1 TSL 1 (best) BASIC17.72■□□□□ 0.43
UBE2D4Q9Y2X8 HSD11B1L-209ENST00000577917 1553 ntTSL 1 (best) BASIC17.72■□□□□ 0.43
UBE2D4Q9Y2X8 AUTS2-202ENST00000403018 957 ntTSL 1 (best) BASIC17.72■□□□□ 0.43
UBE2D4Q9Y2X8 ADNP-AS1-201ENST00000558899 927 ntTSL 3 BASIC17.72■□□□□ 0.43
UBE2D4Q9Y2X8 TBCC-201ENST00000372876 1616 ntAPPRIS P1 BASIC17.71■□□□□ 0.43
UBE2D4Q9Y2X8 OTUD5-202ENST00000376488 2692 ntAPPRIS ALT1 TSL 1 (best) BASIC17.71■□□□□ 0.43
UBE2D4Q9Y2X8 TMEM185A-207ENST00000600449 2840 ntAPPRIS P1 TSL 1 (best) BASIC17.71■□□□□ 0.42
UBE2D4Q9Y2X8 ZNF639-209ENST00000496856 2033 ntAPPRIS P1 TSL 1 (best) BASIC17.71■□□□□ 0.42
UBE2D4Q9Y2X8 AC100797.4-201ENST00000631653 1827 ntBASIC17.7■□□□□ 0.42
UBE2D4Q9Y2X8 DEDD-212ENST00000545495 2329 ntAPPRIS P1 TSL 3 BASIC17.7■□□□□ 0.42
UBE2D4Q9Y2X8 UBAC1-201ENST00000371756 1867 ntAPPRIS P1 TSL 1 (best) BASIC17.7■□□□□ 0.42
UBE2D4Q9Y2X8 AL109917.1-201ENST00000412228 906 ntTSL 2 BASIC17.7■□□□□ 0.42
UBE2D4Q9Y2X8 PKM-203ENST00000389093 2279 ntTSL 5 BASIC17.7■□□□□ 0.42
UBE2D4Q9Y2X8 SV2B-203ENST00000545111 2099 ntTSL 2 BASIC17.7■□□□□ 0.42
UBE2D4Q9Y2X8 ITPKA-201ENST00000260386 1824 ntAPPRIS P1 TSL 1 (best) BASIC17.7■□□□□ 0.42
UBE2D4Q9Y2X8 REXO4-202ENST00000371942 2360 ntAPPRIS P1 TSL 1 (best) BASIC17.69■□□□□ 0.42
UBE2D4Q9Y2X8 COQ2-202ENST00000311469 1641 ntAPPRIS P2 TSL 1 (best) BASIC17.69■□□□□ 0.42
UBE2D4Q9Y2X8 AKAP17A-202ENST00000381261 2187 ntAPPRIS ALT2 TSL 1 (best) BASIC17.69■□□□□ 0.42
UBE2D4Q9Y2X8 CHPT1-201ENST00000229266 1585 ntAPPRIS P2 TSL 1 (best) BASIC17.69■□□□□ 0.42
UBE2D4Q9Y2X8 ATP6V1E2-204ENST00000522587 1559 ntAPPRIS P1 TSL 3 BASIC17.69■□□□□ 0.42
UBE2D4Q9Y2X8 KLC1-225ENST00000557575 2188 ntTSL 5 BASIC17.69■□□□□ 0.42
UBE2D4Q9Y2X8 SPTSSA-201ENST00000298130 2777 ntAPPRIS P1 TSL 1 (best) BASIC17.68■□□□□ 0.42
UBE2D4Q9Y2X8 DENR-202ENST00000455982 1052 ntTSL 5 BASIC17.68■□□□□ 0.42
UBE2D4Q9Y2X8 KIAA2013-201ENST00000376572 2815 ntAPPRIS P1 TSL 1 (best) BASIC17.68■□□□□ 0.42
UBE2D4Q9Y2X8 FGF19-201ENST00000294312 2447 ntAPPRIS P1 TSL 1 (best) BASIC17.68■□□□□ 0.42
UBE2D4Q9Y2X8 AC012615.2-201ENST00000586259 447 ntTSL 4 BASIC17.67■□□□□ 0.42
UBE2D4Q9Y2X8 MXRA7-202ENST00000375036 1950 ntAPPRIS ALT2 TSL 2 BASIC17.66■□□□□ 0.42
UBE2D4Q9Y2X8 SETD8P1-201ENST00000623146 1180 ntBASIC17.66■□□□□ 0.42
UBE2D4Q9Y2X8 FAM66E-202ENST00000533615 2087 ntTSL 2 BASIC17.66■□□□□ 0.42
UBE2D4Q9Y2X8 MSANTD2-201ENST00000239614 2495 ntTSL 2 BASIC17.66■□□□□ 0.42
UBE2D4Q9Y2X8 GPS1-204ENST00000392358 2276 ntTSL 1 (best) BASIC17.65■□□□□ 0.42
UBE2D4Q9Y2X8 BTBD7-201ENST00000298896 2621 ntTSL 1 (best) BASIC17.65■□□□□ 0.42
UBE2D4Q9Y2X8 RARRES2P7-201ENST00000567349 469 ntBASIC17.65■□□□□ 0.42
UBE2D4Q9Y2X8 PLPPR3-201ENST00000359894 2387 ntAPPRIS P3 TSL 1 (best) BASIC17.65■□□□□ 0.42
UBE2D4Q9Y2X8 FBXO45-201ENST00000311630 5899 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.42
UBE2D4Q9Y2X8 AC135731.1-201ENST00000569415 2548 ntBASIC17.64■□□□□ 0.41
UBE2D4Q9Y2X8 CFAP99-207ENST00000635017 2298 ntTSL 5 BASIC17.64■□□□□ 0.41
UBE2D4Q9Y2X8 LDLRAD4-218ENST00000592991 1640 ntTSL 1 (best) BASIC17.64■□□□□ 0.41
UBE2D4Q9Y2X8 AP002414.2-202ENST00000590929 1450 ntBASIC17.63■□□□□ 0.41
UBE2D4Q9Y2X8 APLP1-201ENST00000221891 2495 ntAPPRIS P1 TSL 1 (best) BASIC17.63■□□□□ 0.41
UBE2D4Q9Y2X8 FAM220A-206ENST00000616824 2211 ntTSL 1 (best) BASIC17.63■□□□□ 0.41
UBE2D4Q9Y2X8 HECA-201ENST00000367658 5614 ntAPPRIS P1 TSL 1 (best) BASIC17.63■□□□□ 0.41
UBE2D4Q9Y2X8 TXN-202ENST00000374517 869 ntAPPRIS P1 TSL 1 (best) BASIC17.63■□□□□ 0.41
Retrieved 100 of 98,524 protein–RNA pairs in 23.2 ms