Protein–RNA interactions for Protein: Q9UHC7

MKRN1, E3 ubiquitin-protein ligase makorin-1, humanhuman

Known RBP Predictions only

Length 482 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
MKRN1Q9UHC7 PXMP2-201ENST00000317479 957 ntAPPRIS P1 TSL 1 (best) BASIC31.49■■■□□ 2.63
MKRN1Q9UHC7 QDPR-208ENST00000513615 1188 ntTSL 2 BASIC31.48■■■□□ 2.63
MKRN1Q9UHC7 MTURN-203ENST00000409688 843 ntTSL 2 BASIC31.46■■■□□ 2.63
MKRN1Q9UHC7 LINC01770-201ENST00000417917 634 ntTSL 2 BASIC31.46■■■□□ 2.63
MKRN1Q9UHC7 GFER-205ENST00000569451 517 ntTSL 5 BASIC31.46■■■□□ 2.63
MKRN1Q9UHC7 GAL3ST1-204ENST00000402369 1712 ntAPPRIS P1 TSL 3 BASIC31.46■■■□□ 2.63
MKRN1Q9UHC7 COL13A1-212ENST00000520133 1833 ntTSL 5 BASIC31.44■■■□□ 2.62
MKRN1Q9UHC7 AL592295.1-201ENST00000400984 884 ntBASIC31.43■■■□□ 2.62
MKRN1Q9UHC7 TRIM52-AS1-202ENST00000507434 672 ntTSL 1 (best) BASIC31.43■■■□□ 2.62
MKRN1Q9UHC7 TFEB-204ENST00000373033 2331 ntAPPRIS P1 TSL 1 (best) BASIC31.43■■■□□ 2.62
MKRN1Q9UHC7 MZT2B-201ENST00000281871 933 ntAPPRIS P3 TSL 1 (best) BASIC31.42■■■□□ 2.62
MKRN1Q9UHC7 MZT2A-201ENST00000309451 624 ntAPPRIS P1 TSL 1 (best) BASIC31.42■■■□□ 2.62
MKRN1Q9UHC7 HSD17B12-202ENST00000395700 994 ntTSL 1 (best) BASIC31.42■■■□□ 2.62
MKRN1Q9UHC7 NRG3-203ENST00000404547 2163 ntAPPRIS ALT2 TSL 1 (best) BASIC31.41■■■□□ 2.62
MKRN1Q9UHC7 TXNL4A-208ENST00000588162 752 ntTSL 2 BASIC31.41■■■□□ 2.62
MKRN1Q9UHC7 KIF13A-207ENST00000502704 1330 ntTSL 1 (best) BASIC31.41■■■□□ 2.62
MKRN1Q9UHC7 TPRA1-201ENST00000296210 1725 ntTSL 1 (best) BASIC31.41■■■□□ 2.62
MKRN1Q9UHC7 AC010864.1-201ENST00000609407 1511 ntBASIC31.4■■■□□ 2.62
MKRN1Q9UHC7 MAFA-201ENST00000333480 2347 ntAPPRIS P1 BASIC31.4■■■□□ 2.62
MKRN1Q9UHC7 PXMP2-205ENST00000543589 632 ntTSL 3 BASIC31.4■■■□□ 2.62
MKRN1Q9UHC7 NPW-202ENST00000566435 991 ntAPPRIS ALT2 TSL 1 (best) BASIC31.4■■■□□ 2.62
MKRN1Q9UHC7 U85056.1-201ENST00000616429 682 ntBASIC31.4■■■□□ 2.62
MKRN1Q9UHC7 PELI3-203ENST00000524466 1671 ntTSL 1 (best) BASIC31.4■■■□□ 2.62
MKRN1Q9UHC7 HES4-202ENST00000428771 1040 ntTSL 2 BASIC31.37■■■□□ 2.61
MKRN1Q9UHC7 HNRNPAB-204ENST00000504898 1785 ntAPPRIS P4 TSL 1 (best) BASIC31.36■■■□□ 2.61
MKRN1Q9UHC7 LYSMD2-202ENST00000454181 1228 ntTSL 1 (best) BASIC31.36■■■□□ 2.61
MKRN1Q9UHC7 TSR3-201ENST00000007390 1243 ntAPPRIS P1 TSL 1 (best) BASIC31.36■■■□□ 2.61
MKRN1Q9UHC7 PGM5-201ENST00000396392 1782 ntTSL 1 (best) BASIC31.35■■■□□ 2.61
MKRN1Q9UHC7 WHRN-203ENST00000374057 1718 ntTSL 2 BASIC31.35■■■□□ 2.61
MKRN1Q9UHC7 PRRX2-201ENST00000372469 1311 ntAPPRIS P1 TSL 1 (best) BASIC31.35■■■□□ 2.61
MKRN1Q9UHC7 CCDC37-AS1-202ENST00000506660 986 ntTSL 1 (best) BASIC31.35■■■□□ 2.61
MKRN1Q9UHC7 TSPY13P-201ENST00000338964 914 ntBASIC31.34■■■□□ 2.61
MKRN1Q9UHC7 STUB1-205ENST00000565677 1560 ntTSL 1 (best) BASIC31.34■■■□□ 2.61
MKRN1Q9UHC7 LINC01918-201ENST00000436841 797 ntTSL 2 BASIC31.33■■■□□ 2.61
MKRN1Q9UHC7 TMEM114-202ENST00000568335 899 ntTSL 3 BASIC31.33■■■□□ 2.61
MKRN1Q9UHC7 EI24-212ENST00000615917 1407 ntTSL 2 BASIC31.32■■■□□ 2.61
MKRN1Q9UHC7 CHPT1-205ENST00000549872 2001 ntAPPRIS ALT2 TSL 5 BASIC31.32■■■□□ 2.61
MKRN1Q9UHC7 RAB26-201ENST00000210187 1675 ntAPPRIS P1 TSL 1 (best) BASIC31.32■■■□□ 2.6
MKRN1Q9UHC7 AC231981.1-201ENST00000450917 974 ntTSL 3 BASIC31.32■■■□□ 2.6
MKRN1Q9UHC7 TNFRSF4-201ENST00000379236 1068 ntAPPRIS P1 TSL 1 (best) BASIC31.3■■■□□ 2.6
MKRN1Q9UHC7 S1PR4-201ENST00000246115 1565 ntAPPRIS P1 BASIC31.3■■■□□ 2.6
MKRN1Q9UHC7 HYI-213ENST00000583037 1322 ntTSL 5 BASIC31.29■■■□□ 2.6
MKRN1Q9UHC7 DPF1-204ENST00000416611 2341 ntTSL 5 BASIC31.29■■■□□ 2.6
MKRN1Q9UHC7 SHC2-201ENST00000264554 2494 ntAPPRIS P1 TSL 1 (best) BASIC31.29■■■□□ 2.6
MKRN1Q9UHC7 BAX-202ENST00000345358 793 ntAPPRIS P1 TSL 1 (best) BASIC31.29■■■□□ 2.6
MKRN1Q9UHC7 AC004987.1-201ENST00000428627 508 ntBASIC31.29■■■□□ 2.6
MKRN1Q9UHC7 HOXD8-201ENST00000313173 1917 ntAPPRIS P3 TSL 2 BASIC31.29■■■□□ 2.6
MKRN1Q9UHC7 ST7-208ENST00000393451 2110 ntAPPRIS P1 TSL 1 (best) BASIC31.28■■■□□ 2.6
MKRN1Q9UHC7 CERS2-201ENST00000271688 2544 ntAPPRIS P1 TSL 5 BASIC31.28■■■□□ 2.6
MKRN1Q9UHC7 AL135925.1-201ENST00000605920 1701 ntBASIC31.27■■■□□ 2.6
MKRN1Q9UHC7 DSG2-202ENST00000585206 1081 ntTSL 2 BASIC31.27■■■□□ 2.6
MKRN1Q9UHC7 ABHD17A-202ENST00000292577 1757 ntAPPRIS P1 TSL 1 (best) BASIC31.27■■■□□ 2.6
MKRN1Q9UHC7 CARS2-201ENST00000257347 1879 ntAPPRIS P1 TSL 1 (best) BASIC31.25■■■□□ 2.59
MKRN1Q9UHC7 GUK1-208ENST00000366728 842 ntTSL 2 BASIC31.24■■■□□ 2.59
MKRN1Q9UHC7 C14orf80-202ENST00000334656 1358 ntAPPRIS ALT2 TSL 2 BASIC31.24■■■□□ 2.59
MKRN1Q9UHC7 EBAG9-202ENST00000395785 1467 ntAPPRIS P1 TSL 1 (best) BASIC31.24■■■□□ 2.59
MKRN1Q9UHC7 ATP5G2P3-201ENST00000429083 425 ntBASIC31.23■■■□□ 2.59
MKRN1Q9UHC7 KLHL21-203ENST00000463043 667 ntTSL 5 BASIC31.23■■■□□ 2.59
MKRN1Q9UHC7 POU3F1-201ENST00000373012 2184 ntAPPRIS P1 BASIC31.23■■■□□ 2.59
MKRN1Q9UHC7 C20orf24-203ENST00000373852 1059 ntTSL 1 (best) BASIC31.22■■■□□ 2.59
MKRN1Q9UHC7 TAZ-215ENST00000612460 1793 ntAPPRIS P1 TSL 1 (best) BASIC31.2■■■□□ 2.59
MKRN1Q9UHC7 ENKD1-201ENST00000243878 1579 ntAPPRIS P1 TSL 1 (best) BASIC31.19■■■□□ 2.58
MKRN1Q9UHC7 SMDT1-201ENST00000331479 1567 ntAPPRIS P1 TSL 1 (best) BASIC31.19■■■□□ 2.58
MKRN1Q9UHC7 MDFIC-203ENST00000423503 474 ntTSL 1 (best) BASIC31.19■■■□□ 2.58
MKRN1Q9UHC7 HES4-204ENST00000484667 667 ntTSL 3 BASIC31.19■■■□□ 2.58
MKRN1Q9UHC7 HOMER3-207ENST00000594794 903 ntTSL 5 BASIC31.19■■■□□ 2.58
MKRN1Q9UHC7 RAB4B-203ENST00000594800 1173 ntAPPRIS P1 TSL 5 BASIC31.19■■■□□ 2.58
MKRN1Q9UHC7 SURF1-201ENST00000371974 1093 ntAPPRIS P1 TSL 1 (best) BASIC31.18■■■□□ 2.58
MKRN1Q9UHC7 BOK-AS1-201ENST00000434306 643 ntTSL 1 (best) BASIC31.18■■■□□ 2.58
MKRN1Q9UHC7 SURF1-205ENST00000615505 991 ntTSL 1 (best) BASIC31.18■■■□□ 2.58
MKRN1Q9UHC7 TPRG1L-202ENST00000378344 2414 ntAPPRIS P1 TSL 2 BASIC31.18■■■□□ 2.58
MKRN1Q9UHC7 RPARP-AS1-205ENST00000596045 431 ntTSL 3 BASIC31.17■■■□□ 2.58
MKRN1Q9UHC7 MBOAT7-202ENST00000338624 2076 ntTSL 2 BASIC31.17■■■□□ 2.58
MKRN1Q9UHC7 KRT18P60-201ENST00000312876 1297 ntBASIC31.16■■■□□ 2.58
MKRN1Q9UHC7 FSD1L-204ENST00000469022 1836 ntTSL 1 (best) BASIC31.16■■■□□ 2.58
MKRN1Q9UHC7 ANGPTL6-201ENST00000253109 1900 ntAPPRIS P1 TSL 1 (best) BASIC31.16■■■□□ 2.58
MKRN1Q9UHC7 AGAP3-211ENST00000473312 2039 ntTSL 1 (best) BASIC31.15■■■□□ 2.58
MKRN1Q9UHC7 SH3GL3-202ENST00000427482 1806 ntAPPRIS P1 TSL 1 (best) BASIC31.15■■■□□ 2.58
MKRN1Q9UHC7 ZDHHC16-201ENST00000345745 1519 ntTSL 1 (best) BASIC31.15■■■□□ 2.58
MKRN1Q9UHC7 HAUS7-201ENST00000370210 1593 ntAPPRIS ALT2 TSL 2 BASIC31.15■■■□□ 2.58
MKRN1Q9UHC7 ATRNL1-207ENST00000527407 1583 ntTSL 5 BASIC31.15■■■□□ 2.58
MKRN1Q9UHC7 AL035685.1-201ENST00000636663 812 ntBASIC31.15■■■□□ 2.58
MKRN1Q9UHC7 GXYLT1-201ENST00000280876 1937 ntAPPRIS ALT2 TSL 1 (best) BASIC31.14■■■□□ 2.58
MKRN1Q9UHC7 TAF10-201ENST00000299424 1215 ntAPPRIS P1 TSL 1 (best) BASIC31.14■■■□□ 2.58
MKRN1Q9UHC7 JMJD8-202ENST00000562111 823 ntTSL 2 BASIC31.14■■■□□ 2.58
MKRN1Q9UHC7 BARX1-201ENST00000253968 1533 ntAPPRIS P1 TSL 1 (best) BASIC31.14■■■□□ 2.57
MKRN1Q9UHC7 MCCD1-201ENST00000376191 955 ntAPPRIS P1 TSL 1 (best) BASIC31.12■■■□□ 2.57
MKRN1Q9UHC7 BTBD19-201ENST00000409335 1214 ntTSL 5 BASIC31.12■■■□□ 2.57
MKRN1Q9UHC7 FAM189B-210ENST00000621094 1335 ntTSL 1 (best) BASIC31.12■■■□□ 2.57
MKRN1Q9UHC7 ANKRD16-201ENST00000191063 1567 ntTSL 3 BASIC31.12■■■□□ 2.57
MKRN1Q9UHC7 COQ2-202ENST00000311469 1641 ntAPPRIS P2 TSL 1 (best) BASIC31.11■■■□□ 2.57
MKRN1Q9UHC7 SERP2-201ENST00000379179 784 ntAPPRIS P1 TSL 1 (best) BASIC31.11■■■□□ 2.57
MKRN1Q9UHC7 TOMM40-201ENST00000252487 1707 ntAPPRIS P2 TSL 1 (best) BASIC31.1■■■□□ 2.57
MKRN1Q9UHC7 TOMM40-202ENST00000405636 1709 ntAPPRIS P2 TSL 1 (best) BASIC31.1■■■□□ 2.57
MKRN1Q9UHC7 LINC00273-201ENST00000539813 1452 ntBASIC31.09■■■□□ 2.57
MKRN1Q9UHC7 FEZF2-202ENST00000475839 1918 ntAPPRIS P1 TSL 1 (best) BASIC31.09■■■□□ 2.57
MKRN1Q9UHC7 LFNG-201ENST00000222725 2377 ntAPPRIS P4 TSL 5 BASIC31.08■■■□□ 2.57
MKRN1Q9UHC7 MAPK9-202ENST00000347470 1509 ntTSL 5 BASIC31.08■■■□□ 2.57
MKRN1Q9UHC7 MIF-201ENST00000215754 939 ntAPPRIS P1 TSL 1 (best) BASIC31.07■■■□□ 2.56
MKRN1Q9UHC7 TRIOBP-205ENST00000407319 2125 ntAPPRIS P3 TSL 1 (best) BASIC31.07■■■□□ 2.56
Retrieved 100 of 98,524 protein–RNA pairs in 58.4 ms