Protein–RNA interactions for Protein: Q9NZC2

TREM2, Triggering receptor expressed on myeloid cells 2, humanhuman

Predictions only

Length 230 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TREM2Q9NZC2 HNRNPAB-205ENST00000506259 1674 ntAPPRIS ALT2 TSL 1 (best) BASIC22■■□□□ 1.11
TREM2Q9NZC2 AC135731.1-201ENST00000569415 2548 ntBASIC22■■□□□ 1.11
TREM2Q9NZC2 SHF-206ENST00000560471 2499 ntTSL 5 BASIC21.99■■□□□ 1.11
TREM2Q9NZC2 DDN-AS1-203ENST00000552284 934 ntTSL 3 BASIC21.99■■□□□ 1.11
TREM2Q9NZC2 SMDT1-201ENST00000331479 1567 ntAPPRIS P1 TSL 1 (best) BASIC21.99■■□□□ 1.11
TREM2Q9NZC2 C14orf80-202ENST00000334656 1358 ntAPPRIS ALT2 TSL 2 BASIC21.99■■□□□ 1.11
TREM2Q9NZC2 CCM2L-201ENST00000262659 2523 ntAPPRIS P1 TSL 1 (best) BASIC21.98■■□□□ 1.11
TREM2Q9NZC2 BARX1-201ENST00000253968 1533 ntAPPRIS P1 TSL 1 (best) BASIC21.98■■□□□ 1.11
TREM2Q9NZC2 GRK6-206ENST00000507633 1660 ntTSL 5 BASIC21.98■■□□□ 1.11
TREM2Q9NZC2 ZIC2-201ENST00000376335 2983 ntAPPRIS P1 TSL 1 (best) BASIC21.97■■□□□ 1.11
TREM2Q9NZC2 MKNK2-202ENST00000309340 1744 ntAPPRIS ALT2 TSL 1 (best) BASIC21.96■■□□□ 1.11
TREM2Q9NZC2 ACOT12-204ENST00000513751 612 ntTSL 1 (best) BASIC21.95■■□□□ 1.1
TREM2Q9NZC2 RNF166-209ENST00000567844 633 ntTSL 5 BASIC21.95■■□□□ 1.1
TREM2Q9NZC2 FAM189B-210ENST00000621094 1335 ntTSL 1 (best) BASIC21.95■■□□□ 1.1
TREM2Q9NZC2 CERS2-205ENST00000368954 2505 ntAPPRIS P1 TSL 1 (best) BASIC21.95■■□□□ 1.1
TREM2Q9NZC2 WHRN-203ENST00000374057 1718 ntTSL 2 BASIC21.94■■□□□ 1.1
TREM2Q9NZC2 WSB2-201ENST00000315436 2646 ntAPPRIS P1 TSL 1 (best) BASIC21.94■■□□□ 1.1
TREM2Q9NZC2 FZD2-201ENST00000315323 2112 ntAPPRIS P1 BASIC21.94■■□□□ 1.1
TREM2Q9NZC2 RPS2-202ENST00000526522 924 ntTSL 2 BASIC21.94■■□□□ 1.1
TREM2Q9NZC2 CCDC160-202ENST00000517294 1790 ntAPPRIS P1 TSL 5 BASIC21.94■■□□□ 1.1
TREM2Q9NZC2 ARHGAP22-202ENST00000374170 2107 ntTSL 5 BASIC21.94■■□□□ 1.1
TREM2Q9NZC2 HOXB3-212ENST00000498678 2196 ntAPPRIS P1 TSL 2 BASIC21.94■■□□□ 1.1
TREM2Q9NZC2 IL17D-201ENST00000304920 1861 ntAPPRIS P1 TSL 1 (best) BASIC21.93■■□□□ 1.1
TREM2Q9NZC2 ZNF787-203ENST00000610935 1925 ntAPPRIS P1 TSL 1 (best) BASIC21.93■■□□□ 1.1
TREM2Q9NZC2 ARPC5L-202ENST00000353214 2507 ntAPPRIS P1 TSL 2 BASIC21.92■■□□□ 1.1
TREM2Q9NZC2 HSD11B1L-202ENST00000339423 1660 ntAPPRIS P3 TSL 1 (best) BASIC21.92■■□□□ 1.1
TREM2Q9NZC2 LINC01971-201ENST00000617888 1048 ntBASIC21.92■■□□□ 1.1
TREM2Q9NZC2 TESK1-201ENST00000336395 2421 ntAPPRIS P1 TSL 1 (best) BASIC21.91■■□□□ 1.1
TREM2Q9NZC2 MTCH1-202ENST00000373627 2057 ntAPPRIS P1 TSL 1 (best) BASIC21.91■■□□□ 1.1
TREM2Q9NZC2 COL13A1-214ENST00000522165 2061 ntAPPRIS ALT2 TSL 5 BASIC21.91■■□□□ 1.1
TREM2Q9NZC2 AL139393.2-201ENST00000608721 2025 ntBASIC21.91■■□□□ 1.1
TREM2Q9NZC2 ZNF219-201ENST00000360947 3071 ntAPPRIS P1 TSL 1 (best) BASIC21.91■■□□□ 1.1
TREM2Q9NZC2 COQ2-202ENST00000311469 1641 ntAPPRIS P2 TSL 1 (best) BASIC21.91■■□□□ 1.1
TREM2Q9NZC2 ATF4-201ENST00000337304 2019 ntAPPRIS P1 TSL 1 (best) BASIC21.9■■□□□ 1.1
TREM2Q9NZC2 ARHGEF7-205ENST00000375739 5375 ntTSL 1 (best) BASIC21.9■■□□□ 1.1
TREM2Q9NZC2 RUNX2-205ENST00000465038 1770 ntAPPRIS P4 TSL 5 BASIC21.9■■□□□ 1.1
TREM2Q9NZC2 MACF1-219ENST00000484793 834 ntTSL 2 BASIC21.9■■□□□ 1.1
TREM2Q9NZC2 CALM3-209ENST00000597743 577 ntTSL 4 BASIC21.9■■□□□ 1.1
TREM2Q9NZC2 DUX4L11-201ENST00000611504 1267 ntBASIC21.9■■□□□ 1.1
TREM2Q9NZC2 DUX4L12-201ENST00000614593 1267 ntBASIC21.9■■□□□ 1.1
TREM2Q9NZC2 DUX4L14-201ENST00000621227 1267 ntBASIC21.9■■□□□ 1.1
TREM2Q9NZC2 GKAP1-202ENST00000376365 1511 ntTSL 1 (best) BASIC21.9■■□□□ 1.1
TREM2Q9NZC2 MORF4L1-203ENST00000426013 1880 ntAPPRIS P1 TSL 1 (best) BASIC21.89■■□□□ 1.09
TREM2Q9NZC2 CLEC3B-202ENST00000428034 752 ntTSL 2 BASIC21.88■■□□□ 1.09
TREM2Q9NZC2 TCAM1P-201ENST00000463377 452 ntTSL 3 BASIC21.88■■□□□ 1.09
TREM2Q9NZC2 NPC2-207ENST00000555619 1035 ntAPPRIS P2 TSL 1 (best) BASIC21.88■■□□□ 1.09
TREM2Q9NZC2 MIR3648-2-201ENST00000581792 180 ntBASIC21.88■■□□□ 1.09
TREM2Q9NZC2 AC016575.1-201ENST00000607026 382 ntBASIC21.88■■□□□ 1.09
TREM2Q9NZC2 MIR3648-1-201ENST00000615959 180 ntBASIC21.88■■□□□ 1.09
TREM2Q9NZC2 GDI1-215ENST00000630693 786 ntTSL 4 BASIC21.88■■□□□ 1.09
TREM2Q9NZC2 SHARPIN-202ENST00000398712 1765 ntAPPRIS P1 TSL 1 (best) BASIC21.88■■□□□ 1.09
TREM2Q9NZC2 MARCH11-201ENST00000332432 1741 ntAPPRIS P1 TSL 5 BASIC21.88■■□□□ 1.09
TREM2Q9NZC2 MAGI2-211ENST00000535697 6146 ntTSL 5 BASIC21.88■■□□□ 1.09
TREM2Q9NZC2 SPATA5L1-208ENST00000638607 1863 ntTSL 2 BASIC21.88■■□□□ 1.09
TREM2Q9NZC2 DPF1-202ENST00000412732 2303 ntTSL 1 (best) BASIC21.88■■□□□ 1.09
TREM2Q9NZC2 LINC02323-201ENST00000559946 1603 ntTSL 3 BASIC21.88■■□□□ 1.09
TREM2Q9NZC2 TMEM9-201ENST00000367330 1959 ntAPPRIS P3 TSL 1 (best) BASIC21.87■■□□□ 1.09
TREM2Q9NZC2 C5orf66-AS1-201ENST00000507035 843 ntTSL 2 BASIC21.87■■□□□ 1.09
TREM2Q9NZC2 ITGA9-203ENST00000422441 2282 ntTSL 1 (best) BASIC21.87■■□□□ 1.09
TREM2Q9NZC2 SLC12A2-202ENST00000343225 5509 ntAPPRIS ALT2 TSL 1 (best) BASIC21.87■■□□□ 1.09
TREM2Q9NZC2 KRT18-201ENST00000388835 1562 ntAPPRIS P1 TSL 1 (best) BASIC21.87■■□□□ 1.09
TREM2Q9NZC2 TMEM251-202ENST00000415050 1303 ntTSL 2 BASIC21.86■■□□□ 1.09
TREM2Q9NZC2 RTN2-202ENST00000344680 2063 ntAPPRIS P1 TSL 1 (best) BASIC21.86■■□□□ 1.09
TREM2Q9NZC2 AC004837.3-201ENST00000420748 565 ntTSL 4 BASIC21.86■■□□□ 1.09
TREM2Q9NZC2 AL118558.1-203ENST00000553701 447 ntTSL 3 BASIC21.86■■□□□ 1.09
TREM2Q9NZC2 JMJD8-202ENST00000562111 823 ntTSL 2 BASIC21.86■■□□□ 1.09
TREM2Q9NZC2 C1QTNF8-201ENST00000328449 1627 ntAPPRIS P1 TSL 5 BASIC21.86■■□□□ 1.09
TREM2Q9NZC2 PLSCR3-209ENST00000574401 2032 ntAPPRIS P1 TSL 1 (best) BASIC21.85■■□□□ 1.09
TREM2Q9NZC2 LINC00273-201ENST00000539813 1452 ntBASIC21.85■■□□□ 1.09
TREM2Q9NZC2 TNFSF12-201ENST00000293825 1553 ntAPPRIS P1 TSL 1 (best) BASIC21.85■■□□□ 1.09
TREM2Q9NZC2 AMZ2-201ENST00000359783 1722 ntTSL 5 BASIC21.85■■□□□ 1.09
TREM2Q9NZC2 HDGF-210ENST00000537739 2073 ntAPPRIS P1 TSL 1 (best) BASIC21.84■■□□□ 1.09
TREM2Q9NZC2 P2RX2-203ENST00000350048 1344 ntTSL 1 (best) BASIC21.84■■□□□ 1.09
TREM2Q9NZC2 H2AFV-204ENST00000350771 687 ntTSL 2 BASIC21.84■■□□□ 1.09
TREM2Q9NZC2 MIR639-201ENST00000384974 98 ntBASIC21.84■■□□□ 1.09
TREM2Q9NZC2 AP000251.1-201ENST00000433071 822 ntTSL 1 (best) BASIC21.84■■□□□ 1.09
TREM2Q9NZC2 TRIM52-AS1-203ENST00000509252 529 ntTSL 3 BASIC21.84■■□□□ 1.09
TREM2Q9NZC2 AP003068.2-202ENST00000526623 1662 ntTSL 2 BASIC21.84■■□□□ 1.09
TREM2Q9NZC2 SLC16A11-201ENST00000308009 1803 ntAPPRIS P2 TSL 1 (best) BASIC21.83■■□□□ 1.09
TREM2Q9NZC2 PDPK1-203ENST00000389224 2416 ntTSL 2 BASIC21.83■■□□□ 1.09
TREM2Q9NZC2 NREP-216ENST00000508870 540 ntAPPRIS P1 TSL 4 BASIC21.83■■□□□ 1.09
TREM2Q9NZC2 ADAP1-201ENST00000265846 2363 ntAPPRIS P1 TSL 1 (best) BASIC21.83■■□□□ 1.08
TREM2Q9NZC2 UBAC1-201ENST00000371756 1867 ntAPPRIS P1 TSL 1 (best) BASIC21.83■■□□□ 1.08
TREM2Q9NZC2 EBPL-201ENST00000242827 914 ntAPPRIS P1 TSL 1 (best) BASIC21.82■■□□□ 1.08
TREM2Q9NZC2 RPS2-201ENST00000343262 985 ntAPPRIS P1 TSL 1 (best) BASIC21.82■■□□□ 1.08
TREM2Q9NZC2 AGPS-202ENST00000409888 815 ntTSL 4 BASIC21.82■■□□□ 1.08
TREM2Q9NZC2 CR559946.2-201ENST00000623684 991 ntBASIC21.82■■□□□ 1.08
TREM2Q9NZC2 SENP3-201ENST00000321337 2611 ntAPPRIS P1 TSL 1 (best) BASIC21.81■■□□□ 1.08
TREM2Q9NZC2 C16orf59-202ENST00000483320 1709 ntAPPRIS ALT2 TSL 2 BASIC21.81■■□□□ 1.08
TREM2Q9NZC2 HSD17B1-201ENST00000225929 1265 ntAPPRIS ALT2 TSL 2 BASIC21.81■■□□□ 1.08
TREM2Q9NZC2 RANBP1-202ENST00000402752 1132 ntAPPRIS ALT1 TSL 1 (best) BASIC21.81■■□□□ 1.08
TREM2Q9NZC2 RUNX2-203ENST00000371436 1588 ntAPPRIS ALT2 TSL 5 BASIC21.81■■□□□ 1.08
TREM2Q9NZC2 AC142086.6-201ENST00000621154 1765 ntBASIC21.81■■□□□ 1.08
TREM2Q9NZC2 WHAMMP2-203ENST00000563942 1603 ntBASIC21.8■■□□□ 1.08
TREM2Q9NZC2 FAM220A-206ENST00000616824 2211 ntTSL 1 (best) BASIC21.8■■□□□ 1.08
TREM2Q9NZC2 THAP11-201ENST00000303596 2114 ntAPPRIS P1 BASIC21.8■■□□□ 1.08
TREM2Q9NZC2 PQLC1-203ENST00000397778 2555 ntAPPRIS P3 TSL 1 (best) BASIC21.8■■□□□ 1.08
TREM2Q9NZC2 ZFAND2B-208ENST00000409594 2021 ntTSL 2 BASIC21.79■■□□□ 1.08
TREM2Q9NZC2 C11orf95-204ENST00000546282 390 ntTSL 3 BASIC21.79■■□□□ 1.08
TREM2Q9NZC2 MIR4449-201ENST00000578365 66 ntBASIC21.79■■□□□ 1.08
Retrieved 100 of 98,524 protein–RNA pairs in 18.7 ms