Protein–RNA interactions for Protein: Q9NUP9

LIN7C, Protein lin-7 homolog C, humanhuman

Known RBP Predictions only

Length 197 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LIN7CQ9NUP9 TMEM55B-201ENST00000250489 1961 ntAPPRIS P3 TSL 1 (best) BASIC21.14■□□□□ 0.98
LIN7CQ9NUP9 TMEM200C-201ENST00000383490 1920 ntAPPRIS P1 BASIC21.14■□□□□ 0.98
LIN7CQ9NUP9 RPS2-209ENST00000529806 993 ntTSL 3 BASIC21.14■□□□□ 0.97
LIN7CQ9NUP9 ZFP90-204ENST00000564323 560 ntTSL 4 BASIC21.14■□□□□ 0.97
LIN7CQ9NUP9 AC012615.2-201ENST00000586259 447 ntTSL 4 BASIC21.14■□□□□ 0.97
LIN7CQ9NUP9 ZFP90-219ENST00000611381 695 ntTSL 1 (best) BASIC21.14■□□□□ 0.97
LIN7CQ9NUP9 KCNJ4-201ENST00000303592 2065 ntAPPRIS P1 TSL 1 (best) BASIC21.14■□□□□ 0.97
LIN7CQ9NUP9 IHH-201ENST00000295731 2023 ntAPPRIS P1 TSL 1 (best) BASIC21.12■□□□□ 0.97
LIN7CQ9NUP9 PROC-203ENST00000409048 1586 ntTSL 5 BASIC21.12■□□□□ 0.97
LIN7CQ9NUP9 ANKS1B-203ENST00000341752 2115 ntTSL 2 BASIC21.12■□□□□ 0.97
LIN7CQ9NUP9 AL162393.1-201ENST00000437852 946 ntBASIC21.12■□□□□ 0.97
LIN7CQ9NUP9 DUX4L28-201ENST00000623687 678 ntBASIC21.12■□□□□ 0.97
LIN7CQ9NUP9 RHEB-201ENST00000262187 2075 ntAPPRIS P1 TSL 1 (best) BASIC21.12■□□□□ 0.97
LIN7CQ9NUP9 BX255925.1-201ENST00000566954 1854 ntBASIC21.11■□□□□ 0.97
LIN7CQ9NUP9 WTAP-206ENST00000621533 2109 ntAPPRIS P1 TSL 2 BASIC21.11■□□□□ 0.97
LIN7CQ9NUP9 C11orf80-218ENST00000540737 1786 ntAPPRIS ALT2 TSL 2 BASIC21.11■□□□□ 0.97
LIN7CQ9NUP9 VEGFA-231ENST00000640499 1188 ntAPPRIS P3 TSL 1 (best) BASIC21.11■□□□□ 0.97
LIN7CQ9NUP9 VIPR2-203ENST00000402066 1926 ntAPPRIS ALT2 TSL 5 BASIC21.11■□□□□ 0.97
LIN7CQ9NUP9 CDH23-208ENST00000461841 2000 ntTSL 5 BASIC21.11■□□□□ 0.97
LIN7CQ9NUP9 ENKD1-201ENST00000243878 1579 ntAPPRIS P1 TSL 1 (best) BASIC21.1■□□□□ 0.97
LIN7CQ9NUP9 DERA-201ENST00000428559 1705 ntAPPRIS P1 TSL 1 (best) BASIC21.1■□□□□ 0.97
LIN7CQ9NUP9 NRG1-221ENST00000614767 762 ntTSL 5 BASIC21.1■□□□□ 0.97
LIN7CQ9NUP9 RCC1L-205ENST00000618035 1409 ntTSL 1 (best) BASIC21.1■□□□□ 0.97
LIN7CQ9NUP9 FHL2-202ENST00000344213 1769 ntTSL 1 (best) BASIC21.1■□□□□ 0.97
LIN7CQ9NUP9 C17orf97-201ENST00000360127 1839 ntAPPRIS P2 TSL 1 (best) BASIC21.09■□□□□ 0.97
LIN7CQ9NUP9 MACROD1-201ENST00000255681 1205 ntAPPRIS P1 TSL 1 (best) BASIC21.09■□□□□ 0.97
LIN7CQ9NUP9 PCK2-202ENST00000396973 1830 ntTSL 1 (best) BASIC21.08■□□□□ 0.97
LIN7CQ9NUP9 BATF3-201ENST00000243440 980 ntAPPRIS P1 TSL 1 (best) BASIC21.08■□□□□ 0.97
LIN7CQ9NUP9 NKIRAS2-202ENST00000316082 833 ntTSL 5 BASIC21.08■□□□□ 0.97
LIN7CQ9NUP9 NAA50-207ENST00000493900 962 ntAPPRIS ALT1 TSL 2 BASIC21.08■□□□□ 0.97
LIN7CQ9NUP9 PRELID2-207ENST00000511435 1894 ntAPPRIS ALT1 TSL 2 BASIC21.08■□□□□ 0.97
LIN7CQ9NUP9 CARM1-202ENST00000344150 2722 ntAPPRIS ALT2 TSL 5 BASIC21.08■□□□□ 0.96
LIN7CQ9NUP9 FAH-213ENST00000561421 1549 ntAPPRIS P1 TSL 1 (best) BASIC21.08■□□□□ 0.96
LIN7CQ9NUP9 ZCCHC2-201ENST00000269499 5959 ntAPPRIS P2 TSL 5 BASIC21.08■□□□□ 0.96
LIN7CQ9NUP9 NPAS3-201ENST00000346562 5847 ntAPPRIS P3 TSL 1 (best) BASIC21.08■□□□□ 0.96
LIN7CQ9NUP9 CREM-210ENST00000374721 2020 ntTSL 5 BASIC21.07■□□□□ 0.96
LIN7CQ9NUP9 JAG2-202ENST00000347004 5720 ntTSL 1 (best) BASIC21.07■□□□□ 0.96
LIN7CQ9NUP9 CIB1-201ENST00000328649 1247 ntAPPRIS P1 TSL 1 (best) BASIC21.07■□□□□ 0.96
LIN7CQ9NUP9 CIB1-202ENST00000612800 1096 ntTSL 1 (best) BASIC21.07■□□□□ 0.96
LIN7CQ9NUP9 ZNF276-202ENST00000443381 2267 ntAPPRIS P1 TSL 1 (best) BASIC21.07■□□□□ 0.96
LIN7CQ9NUP9 MNX1-207ENST00000543409 1620 ntAPPRIS ALT2 TSL 1 (best) BASIC21.07■□□□□ 0.96
LIN7CQ9NUP9 PHF20L1-207ENST00000395379 1998 ntTSL 5 BASIC21.06■□□□□ 0.96
LIN7CQ9NUP9 RUNDC3A-201ENST00000225441 1821 ntTSL 1 (best) BASIC21.06■□□□□ 0.96
LIN7CQ9NUP9 SCX-201ENST00000567180 999 ntAPPRIS P1 TSL 1 (best) BASIC21.06■□□□□ 0.96
LIN7CQ9NUP9 TOMM40-201ENST00000252487 1707 ntAPPRIS P2 TSL 1 (best) BASIC21.06■□□□□ 0.96
LIN7CQ9NUP9 TOMM40-202ENST00000405636 1709 ntAPPRIS P2 TSL 1 (best) BASIC21.06■□□□□ 0.96
LIN7CQ9NUP9 TSEN34-203ENST00000396388 1349 ntAPPRIS P1 TSL 1 (best) BASIC21.05■□□□□ 0.96
LIN7CQ9NUP9 PHF23-205ENST00000571362 1768 ntTSL 2 BASIC21.05■□□□□ 0.96
LIN7CQ9NUP9 TRADD-201ENST00000345057 1877 ntAPPRIS P1 TSL 1 (best) BASIC21.05■□□□□ 0.96
LIN7CQ9NUP9 MISP3-202ENST00000587086 1535 ntAPPRIS P2 TSL 1 (best) BASIC21.05■□□□□ 0.96
LIN7CQ9NUP9 SHOX2-201ENST00000389589 2072 ntAPPRIS P3 TSL 1 (best) BASIC21.05■□□□□ 0.96
LIN7CQ9NUP9 MRAP2-201ENST00000257776 2153 ntAPPRIS P1 TSL 1 (best) BASIC21.05■□□□□ 0.96
LIN7CQ9NUP9 MPP6-203ENST00000409761 1703 ntTSL 5 BASIC21.05■□□□□ 0.96
LIN7CQ9NUP9 FADD-201ENST00000301838 1841 ntAPPRIS P1 TSL 1 (best) BASIC21.05■□□□□ 0.96
LIN7CQ9NUP9 MORF4L1-203ENST00000426013 1880 ntAPPRIS P1 TSL 1 (best) BASIC21.05■□□□□ 0.96
LIN7CQ9NUP9 MTNR1A-201ENST00000307161 1289 ntAPPRIS P1 TSL 1 (best) BASIC21.04■□□□□ 0.96
LIN7CQ9NUP9 AC004080.1-201ENST00000523608 757 ntTSL 2 BASIC21.04■□□□□ 0.96
LIN7CQ9NUP9 FLJ37453-201ENST00000317122 2473 ntTSL 2 BASIC21.04■□□□□ 0.96
LIN7CQ9NUP9 TMEM64-201ENST00000418210 4663 ntTSL 2 BASIC21.04■□□□□ 0.96
LIN7CQ9NUP9 RCOR3-202ENST00000367006 2525 ntTSL 1 (best) BASIC21.04■□□□□ 0.96
LIN7CQ9NUP9 TNFRSF25-205ENST00000377782 1632 ntAPPRIS P4 TSL 1 (best) BASIC21.04■□□□□ 0.96
LIN7CQ9NUP9 RRNAD1-201ENST00000368216 2254 ntAPPRIS P3 TSL 1 (best) BASIC21.03■□□□□ 0.96
LIN7CQ9NUP9 HNRNPAB-204ENST00000504898 1785 ntAPPRIS P4 TSL 1 (best) BASIC21.03■□□□□ 0.96
LIN7CQ9NUP9 PPP1R14B-201ENST00000309318 982 ntAPPRIS P1 TSL 1 (best) BASIC21.03■□□□□ 0.96
LIN7CQ9NUP9 EVC-203ENST00000509451 1960 ntTSL 1 (best) BASIC21.03■□□□□ 0.96
LIN7CQ9NUP9 MXRA7-203ENST00000449428 1881 ntAPPRIS ALT2 TSL 1 (best) BASIC21.03■□□□□ 0.96
LIN7CQ9NUP9 ZNF768-201ENST00000380412 2315 ntAPPRIS P2 TSL 1 (best) BASIC21.03■□□□□ 0.96
LIN7CQ9NUP9 PSMG4-202ENST00000380305 489 ntTSL 5 BASIC21.02■□□□□ 0.96
LIN7CQ9NUP9 PARD6A-202ENST00000458121 1260 ntAPPRIS ALT1 TSL 1 (best) BASIC21.02■□□□□ 0.96
LIN7CQ9NUP9 TERF2-207ENST00000567296 1129 ntTSL 1 (best) BASIC21.02■□□□□ 0.96
LIN7CQ9NUP9 AP000547.3-202ENST00000592107 1019 ntTSL 1 (best) BASIC21.02■□□□□ 0.96
LIN7CQ9NUP9 AC087741.3-201ENST00000624270 1347 ntBASIC21.02■□□□□ 0.95
LIN7CQ9NUP9 PSMG1-201ENST00000331573 2154 ntAPPRIS P1 TSL 1 (best) BASIC21.02■□□□□ 0.95
LIN7CQ9NUP9 CCNG2-201ENST00000316355 5526 ntAPPRIS P1 TSL 1 (best) BASIC21.01■□□□□ 0.95
LIN7CQ9NUP9 PEA15-201ENST00000360472 2471 ntAPPRIS P1 TSL 1 (best) BASIC21.01■□□□□ 0.95
LIN7CQ9NUP9 ZSWIM6-201ENST00000252744 5501 ntAPPRIS P1 TSL 5 BASIC21.01■□□□□ 0.95
LIN7CQ9NUP9 AC127502.1-201ENST00000399971 1502 ntBASIC21.01■□□□□ 0.95
LIN7CQ9NUP9 RPS2P35-201ENST00000443417 897 ntBASIC21.01■□□□□ 0.95
LIN7CQ9NUP9 MYCL-202ENST00000372816 1688 ntAPPRIS P3 TSL 2 BASIC21.01■□□□□ 0.95
LIN7CQ9NUP9 SHF-208ENST00000560734 1731 ntTSL 3 BASIC21.01■□□□□ 0.95
LIN7CQ9NUP9 HDGFL1-201ENST00000510882 2174 ntAPPRIS P1 BASIC21■□□□□ 0.95
LIN7CQ9NUP9 HMCES-202ENST00000389735 1763 ntAPPRIS P1 TSL 1 (best) BASIC21■□□□□ 0.95
LIN7CQ9NUP9 NOXA1-201ENST00000341349 1678 ntAPPRIS P1 TSL 1 (best) BASIC21■□□□□ 0.95
LIN7CQ9NUP9 AC044849.2-201ENST00000606596 710 ntBASIC21■□□□□ 0.95
LIN7CQ9NUP9 HDHD5-202ENST00000336737 1799 ntAPPRIS ALT2 TSL 1 (best) BASIC21■□□□□ 0.95
LIN7CQ9NUP9 SLC16A11-201ENST00000308009 1803 ntAPPRIS P2 TSL 1 (best) BASIC20.99■□□□□ 0.95
LIN7CQ9NUP9 TCEA2-202ENST00000343484 1235 ntAPPRIS P1 TSL 1 (best) BASIC20.99■□□□□ 0.95
LIN7CQ9NUP9 CCDC160-202ENST00000517294 1790 ntAPPRIS P1 TSL 5 BASIC20.99■□□□□ 0.95
LIN7CQ9NUP9 CYB5R3-201ENST00000352397 2124 ntAPPRIS P1 TSL 1 (best) BASIC20.99■□□□□ 0.95
LIN7CQ9NUP9 CCKBR-201ENST00000334619 2121 ntAPPRIS P1 TSL 1 (best) BASIC20.98■□□□□ 0.95
LIN7CQ9NUP9 GTF3C4-202ENST00000483873 1417 ntTSL 3 BASIC20.98■□□□□ 0.95
LIN7CQ9NUP9 ABHD17C-202ENST00000558464 1976 ntTSL 1 (best) BASIC20.98■□□□□ 0.95
LIN7CQ9NUP9 C1QTNF8-201ENST00000328449 1627 ntAPPRIS P1 TSL 5 BASIC20.98■□□□□ 0.95
LIN7CQ9NUP9 AP000911.1-206ENST00000531938 711 ntTSL 3 BASIC20.98■□□□□ 0.95
LIN7CQ9NUP9 TXNL4A-210ENST00000591711 669 ntTSL 2 BASIC20.98■□□□□ 0.95
LIN7CQ9NUP9 REXO4-201ENST00000371935 1899 ntTSL 3 BASIC20.98■□□□□ 0.95
LIN7CQ9NUP9 RALY-201ENST00000246194 1789 ntAPPRIS P4 TSL 1 (best) BASIC20.97■□□□□ 0.95
LIN7CQ9NUP9 FAM107B-205ENST00000378467 2374 ntAPPRIS P1 TSL 1 (best) BASIC20.97■□□□□ 0.95
LIN7CQ9NUP9 DNPEP-201ENST00000273075 2425 ntAPPRIS P3 TSL 1 (best) BASIC20.97■□□□□ 0.95
LIN7CQ9NUP9 RAB40C-204ENST00000538492 2569 ntAPPRIS P1 TSL 2 BASIC20.96■□□□□ 0.95
Retrieved 100 of 98,524 protein–RNA pairs in 38.3 ms