Protein–RNA interactions for Protein: Q9NRQ5

SMCO4, Single-pass membrane and coiled-coil domain-containing protein 4, humanhuman

Predictions only

Length 59 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SMCO4Q9NRQ5 RAB26-201ENST00000210187 1675 ntAPPRIS P1 TSL 1 (best) BASIC20.31■□□□□ 0.84
SMCO4Q9NRQ5 NECTIN2-202ENST00000252485 2112 ntAPPRIS P3 TSL 1 (best) BASIC20.3■□□□□ 0.84
SMCO4Q9NRQ5 NKPD1-202ENST00000589776 1950 ntAPPRIS P1 BASIC20.3■□□□□ 0.84
SMCO4Q9NRQ5 PLD4-201ENST00000392593 6515 ntAPPRIS P3 TSL 1 (best) BASIC20.3■□□□□ 0.84
SMCO4Q9NRQ5 C17orf97-201ENST00000360127 1839 ntAPPRIS P2 TSL 1 (best) BASIC20.3■□□□□ 0.84
SMCO4Q9NRQ5 CPNE1-203ENST00000397442 1695 ntTSL 5 BASIC20.3■□□□□ 0.84
SMCO4Q9NRQ5 PPP1R14C-201ENST00000361131 2152 ntAPPRIS P1 TSL 1 (best) BASIC20.3■□□□□ 0.84
SMCO4Q9NRQ5 TM9SF3-201ENST00000371142 6141 ntAPPRIS P1 TSL 1 (best) BASIC20.3■□□□□ 0.84
SMCO4Q9NRQ5 NFKBIA-209ENST00000557389 1537 ntTSL 2 BASIC20.3■□□□□ 0.84
SMCO4Q9NRQ5 CYS1-201ENST00000381813 2738 ntAPPRIS P1 TSL 1 (best) BASIC20.3■□□□□ 0.84
SMCO4Q9NRQ5 CPTP-201ENST00000343938 2190 ntAPPRIS P1 TSL 2 BASIC20.29■□□□□ 0.84
SMCO4Q9NRQ5 ZNF653-201ENST00000293771 2240 ntAPPRIS P1 TSL 1 (best) BASIC20.29■□□□□ 0.84
SMCO4Q9NRQ5 MYH7B-209ENST00000618182 6197 ntAPPRIS ALT2 TSL 5 BASIC20.29■□□□□ 0.84
SMCO4Q9NRQ5 TBC1D10A-201ENST00000215790 2077 ntAPPRIS P3 TSL 1 (best) BASIC20.29■□□□□ 0.84
SMCO4Q9NRQ5 BX255925.1-201ENST00000566954 1854 ntBASIC20.28■□□□□ 0.84
SMCO4Q9NRQ5 BIN1-207ENST00000357970 2497 ntTSL 1 (best) BASIC20.28■□□□□ 0.84
SMCO4Q9NRQ5 TMEM200C-201ENST00000383490 1920 ntAPPRIS P1 BASIC20.28■□□□□ 0.84
SMCO4Q9NRQ5 PPP1CC-202ENST00000340766 1472 ntTSL 2 BASIC20.28■□□□□ 0.84
SMCO4Q9NRQ5 ACSF2-203ENST00000502667 2098 ntTSL 2 BASIC20.28■□□□□ 0.84
SMCO4Q9NRQ5 KLC1-203ENST00000347839 2271 ntTSL 5 BASIC20.28■□□□□ 0.84
SMCO4Q9NRQ5 ZNF692-201ENST00000306601 1931 ntAPPRIS P3 TSL 1 (best) BASIC20.27■□□□□ 0.84
SMCO4Q9NRQ5 RINL-202ENST00000591812 1910 ntAPPRIS ALT2 TSL 2 BASIC20.27■□□□□ 0.84
SMCO4Q9NRQ5 DYRK1B-201ENST00000323039 2535 ntAPPRIS P3 TSL 1 (best) BASIC20.27■□□□□ 0.84
SMCO4Q9NRQ5 MAGI2-208ENST00000522391 4878 ntAPPRIS ALT2 TSL 5 BASIC20.27■□□□□ 0.84
SMCO4Q9NRQ5 PITX1-201ENST00000265340 2406 ntAPPRIS P1 TSL 1 (best) BASIC20.27■□□□□ 0.84
SMCO4Q9NRQ5 PRKAR1B-203ENST00000403562 1917 ntAPPRIS P1 TSL 1 (best) BASIC20.27■□□□□ 0.84
SMCO4Q9NRQ5 ADGRA2-202ENST00000412232 5651 ntAPPRIS P1 TSL 1 (best) BASIC20.27■□□□□ 0.84
SMCO4Q9NRQ5 TMEM185A-208ENST00000611119 2662 ntTSL 2 BASIC20.27■□□□□ 0.83
SMCO4Q9NRQ5 PMS1-205ENST00000409985 1882 ntTSL 2 BASIC20.26■□□□□ 0.83
SMCO4Q9NRQ5 NR2F6-201ENST00000291442 2404 ntAPPRIS P1 TSL 1 (best) BASIC20.26■□□□□ 0.83
SMCO4Q9NRQ5 CACNA1H-210ENST00000638323 8048 ntAPPRIS ALT2 TSL 5 BASIC20.26■□□□□ 0.83
SMCO4Q9NRQ5 GTPBP3-203ENST00000361619 1894 ntTSL 2 BASIC20.26■□□□□ 0.83
SMCO4Q9NRQ5 SHISA5-201ENST00000296444 2369 ntTSL 1 (best) BASIC20.26■□□□□ 0.83
SMCO4Q9NRQ5 ZDHHC23-206ENST00000498275 2055 ntAPPRIS ALT2 TSL 2 BASIC20.25■□□□□ 0.83
SMCO4Q9NRQ5 EPM2A-209ENST00000638262 2679 ntTSL 1 (best) BASIC20.25■□□□□ 0.83
SMCO4Q9NRQ5 RARA-204ENST00000394089 2024 ntAPPRIS P1 TSL 2 BASIC20.25■□□□□ 0.83
SMCO4Q9NRQ5 RNF19B-203ENST00000373456 2560 ntAPPRIS P3 TSL 1 (best) BASIC20.24■□□□□ 0.83
SMCO4Q9NRQ5 SNX5-201ENST00000377759 2270 ntAPPRIS P1 TSL 1 (best) BASIC20.24■□□□□ 0.83
SMCO4Q9NRQ5 C3orf80-201ENST00000326474 2718 ntAPPRIS P1 BASIC20.24■□□□□ 0.83
SMCO4Q9NRQ5 FZD8-201ENST00000374694 4030 ntAPPRIS P1 BASIC20.24■□□□□ 0.83
SMCO4Q9NRQ5 ACSS1-202ENST00000376726 2244 ntTSL 2 BASIC20.23■□□□□ 0.83
SMCO4Q9NRQ5 FSD1-201ENST00000221856 1831 ntAPPRIS P1 TSL 1 (best) BASIC20.23■□□□□ 0.83
SMCO4Q9NRQ5 AC091230.1-202ENST00000564823 5356 ntTSL 2 BASIC20.23■□□□□ 0.83
SMCO4Q9NRQ5 AL135925.1-201ENST00000605920 1701 ntBASIC20.23■□□□□ 0.83
SMCO4Q9NRQ5 DPF1-206ENST00000420980 2227 ntTSL 1 (best) BASIC20.23■□□□□ 0.83
SMCO4Q9NRQ5 LRIG1-202ENST00000383703 5283 ntTSL 1 (best) BASIC20.22■□□□□ 0.83
SMCO4Q9NRQ5 PCYT2-205ENST00000570391 1857 ntTSL 2 BASIC20.22■□□□□ 0.83
SMCO4Q9NRQ5 FTCD-201ENST00000291670 1905 ntAPPRIS P1 TSL 1 (best) BASIC20.22■□□□□ 0.83
SMCO4Q9NRQ5 AC091060.1-201ENST00000623524 1766 ntBASIC20.22■□□□□ 0.83
SMCO4Q9NRQ5 ZDHHC16-204ENST00000370842 1877 ntAPPRIS ALT1 TSL 5 BASIC20.22■□□□□ 0.83
SMCO4Q9NRQ5 CABLES1-201ENST00000256925 5002 ntAPPRIS P4 TSL 1 (best) BASIC20.21■□□□□ 0.83
SMCO4Q9NRQ5 LRRC61-202ENST00000359623 1877 ntAPPRIS P1 TSL 2 BASIC20.21■□□□□ 0.83
SMCO4Q9NRQ5 SLC12A2-201ENST00000262461 6885 ntAPPRIS P3 TSL 1 (best) BASIC20.21■□□□□ 0.83
SMCO4Q9NRQ5 SOX10-201ENST00000360880 2861 ntAPPRIS P1 TSL 1 (best) BASIC20.2■□□□□ 0.83
SMCO4Q9NRQ5 SOX10-202ENST00000396884 2879 ntAPPRIS P1 TSL 1 (best) BASIC20.2■□□□□ 0.83
SMCO4Q9NRQ5 GRK4-204ENST00000503518 2136 ntTSL 1 (best) BASIC20.2■□□□□ 0.82
SMCO4Q9NRQ5 AKAP8L-208ENST00000595465 1933 ntTSL 2 BASIC20.2■□□□□ 0.82
SMCO4Q9NRQ5 CLK2-203ENST00000368361 2166 ntAPPRIS ALT1 TSL 1 (best) BASIC20.2■□□□□ 0.82
SMCO4Q9NRQ5 PIK3R2-207ENST00000617130 2187 ntAPPRIS P1 TSL 1 (best) BASIC20.2■□□□□ 0.82
SMCO4Q9NRQ5 ELOA-201ENST00000418390 5154 ntTSL 1 (best) BASIC20.2■□□□□ 0.82
SMCO4Q9NRQ5 CACNA1H-202ENST00000358590 8069 ntAPPRIS ALT2 TSL 5 BASIC20.2■□□□□ 0.82
SMCO4Q9NRQ5 SDCCAG3-201ENST00000298537 2314 ntTSL 1 (best) BASIC20.19■□□□□ 0.82
SMCO4Q9NRQ5 ARMC6-201ENST00000269932 2412 ntAPPRIS P1 TSL 5 BASIC20.19■□□□□ 0.82
SMCO4Q9NRQ5 EBF4-210ENST00000609451 2012 ntAPPRIS ALT1 TSL 5 BASIC20.19■□□□□ 0.82
SMCO4Q9NRQ5 AGAP3-201ENST00000335367 2675 ntTSL 1 (best) BASIC20.19■□□□□ 0.82
SMCO4Q9NRQ5 ADAM22-209ENST00000439864 2576 ntTSL 1 (best) BASIC20.18■□□□□ 0.82
SMCO4Q9NRQ5 SHOX2-201ENST00000389589 2072 ntAPPRIS P3 TSL 1 (best) BASIC20.18■□□□□ 0.82
SMCO4Q9NRQ5 CNIH2-203ENST00000528852 1524 ntAPPRIS ALT1 TSL 1 (best) BASIC20.17■□□□□ 0.82
SMCO4Q9NRQ5 RDX-210ENST00000530301 1549 ntTSL 1 (best) BASIC20.17■□□□□ 0.82
SMCO4Q9NRQ5 USP25-203ENST00000351097 2158 ntTSL 1 (best) BASIC20.17■□□□□ 0.82
SMCO4Q9NRQ5 THRA-202ENST00000394121 2260 ntTSL 2 BASIC20.17■□□□□ 0.82
SMCO4Q9NRQ5 TOP1MT-208ENST00000519148 1868 ntTSL 2 BASIC20.17■□□□□ 0.82
SMCO4Q9NRQ5 NFKBIE-201ENST00000275015 2581 ntTSL 1 (best) BASIC20.17■□□□□ 0.82
SMCO4Q9NRQ5 KANSL1L-207ENST00000452086 2334 ntTSL 1 (best) BASIC20.16■□□□□ 0.82
SMCO4Q9NRQ5 NRG1-210ENST00000520407 1955 ntTSL 1 (best) BASIC20.16■□□□□ 0.82
SMCO4Q9NRQ5 AL136373.1-201ENST00000634804 1449 ntAPPRIS P1 BASIC20.16■□□□□ 0.82
SMCO4Q9NRQ5 DACT1-201ENST00000335867 2571 ntAPPRIS P3 TSL 1 (best) BASIC20.16■□□□□ 0.82
SMCO4Q9NRQ5 ARRDC1-201ENST00000371421 1586 ntAPPRIS P1 TSL 1 (best) BASIC20.16■□□□□ 0.82
SMCO4Q9NRQ5 NKX2-3-201ENST00000344586 2097 ntAPPRIS P1 TSL 2 BASIC20.15■□□□□ 0.82
SMCO4Q9NRQ5 GCLC-209ENST00000514004 2356 ntTSL 1 (best) BASIC20.15■□□□□ 0.82
SMCO4Q9NRQ5 NR6A1-203ENST00000416460 1898 ntAPPRIS ALT2 TSL 1 (best) BASIC20.14■□□□□ 0.81
SMCO4Q9NRQ5 POU2F2-215ENST00000560398 1788 ntTSL 5 BASIC20.14■□□□□ 0.81
SMCO4Q9NRQ5 ATMIN-201ENST00000299575 4884 ntAPPRIS P1 TSL 1 (best) BASIC20.14■□□□□ 0.81
SMCO4Q9NRQ5 ATPAF1-202ENST00000371937 1827 ntAPPRIS P1 TSL 1 (best) BASIC20.13■□□□□ 0.81
SMCO4Q9NRQ5 CAPN12-212ENST00000601953 2381 ntTSL 5 BASIC20.13■□□□□ 0.81
SMCO4Q9NRQ5 FOXO1-201ENST00000379561 5735 ntAPPRIS P1 TSL 1 (best) BASIC20.13■□□□□ 0.81
SMCO4Q9NRQ5 ALG2-203ENST00000476832 1880 ntAPPRIS P1 TSL 1 (best) BASIC20.13■□□□□ 0.81
SMCO4Q9NRQ5 ATAD3B-201ENST00000308647 2448 ntAPPRIS P1 TSL 1 (best) BASIC20.13■□□□□ 0.81
SMCO4Q9NRQ5 YAP1-202ENST00000345877 5284 ntTSL 5 BASIC20.12■□□□□ 0.81
SMCO4Q9NRQ5 HDHD5-202ENST00000336737 1799 ntAPPRIS ALT2 TSL 1 (best) BASIC20.12■□□□□ 0.81
SMCO4Q9NRQ5 AZIN2-201ENST00000294517 2182 ntAPPRIS P1 TSL 1 (best) BASIC20.12■□□□□ 0.81
SMCO4Q9NRQ5 SRXN1-201ENST00000381962 2698 ntAPPRIS P1 TSL 1 (best) BASIC20.11■□□□□ 0.81
SMCO4Q9NRQ5 MAF-202ENST00000393350 6384 ntAPPRIS ALT2 BASIC20.11■□□□□ 0.81
SMCO4Q9NRQ5 CEBPB-AS1-201ENST00000613921 2648 ntTSL 3 BASIC20.11■□□□□ 0.81
SMCO4Q9NRQ5 AUTS2-203ENST00000406775 5950 ntAPPRIS ALT2 TSL 1 (best) BASIC20.11■□□□□ 0.81
SMCO4Q9NRQ5 ARRDC2-202ENST00000379656 2528 ntTSL 2 BASIC20.11■□□□□ 0.81
SMCO4Q9NRQ5 BMP6-201ENST00000283147 2780 ntAPPRIS P1 TSL 1 (best) BASIC20.11■□□□□ 0.81
SMCO4Q9NRQ5 C11orf80-218ENST00000540737 1786 ntAPPRIS ALT2 TSL 2 BASIC20.11■□□□□ 0.81
SMCO4Q9NRQ5 REPS2-202ENST00000357277 7953 ntAPPRIS P3 TSL 1 (best) BASIC20.1■□□□□ 0.81
SMCO4Q9NRQ5 SP5-201ENST00000375281 2033 ntAPPRIS P1 TSL 1 (best) BASIC20.1■□□□□ 0.81
Retrieved 100 of 98,524 protein–RNA pairs in 10.3 ms