Protein–RNA interactions for Protein: Q9HD20

ATP13A1, Manganese-transporting ATPase 13A1, humanhuman

Predictions only

Length 1,204 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ATP13A1Q9HD20 DUX4L11-201ENST00000611504 1267 ntBASIC26.38■■□□□ 1.81
ATP13A1Q9HD20 DUX4L12-201ENST00000614593 1267 ntBASIC26.38■■□□□ 1.81
ATP13A1Q9HD20 DUX4L14-201ENST00000621227 1267 ntBASIC26.38■■□□□ 1.81
ATP13A1Q9HD20 AC135983.2-203ENST00000454486 1613 ntBASIC26.38■■□□□ 1.81
ATP13A1Q9HD20 TESK1-206ENST00000620767 2438 ntAPPRIS P1 TSL 5 BASIC26.37■■□□□ 1.81
ATP13A1Q9HD20 C16orf59-202ENST00000483320 1709 ntAPPRIS ALT2 TSL 2 BASIC26.37■■□□□ 1.81
ATP13A1Q9HD20 AC013394.1-201ENST00000629685 808 ntAPPRIS P1 TSL 5 BASIC26.37■■□□□ 1.81
ATP13A1Q9HD20 SP8-201ENST00000361443 1714 ntAPPRIS P3 TSL 1 (best) BASIC26.36■■□□□ 1.81
ATP13A1Q9HD20 WHAMMP2-203ENST00000563942 1603 ntBASIC26.36■■□□□ 1.81
ATP13A1Q9HD20 RRAGC-201ENST00000373001 2732 ntAPPRIS P1 TSL 1 (best) BASIC26.36■■□□□ 1.81
ATP13A1Q9HD20 AC187653.1-201ENST00000506382 702 ntAPPRIS P1 TSL 5 BASIC26.36■■□□□ 1.81
ATP13A1Q9HD20 PRELID2-207ENST00000511435 1894 ntAPPRIS ALT1 TSL 2 BASIC26.36■■□□□ 1.81
ATP13A1Q9HD20 RNF166-209ENST00000567844 633 ntTSL 5 BASIC26.35■■□□□ 1.81
ATP13A1Q9HD20 FKBP1A-210ENST00000614856 562 ntTSL 2 BASIC26.35■■□□□ 1.81
ATP13A1Q9HD20 ADAT3-201ENST00000329478 1620 ntAPPRIS P1 TSL 1 (best) BASIC26.35■■□□□ 1.81
ATP13A1Q9HD20 TNFRSF25-204ENST00000356876 1625 ntAPPRIS ALT2 TSL 1 (best) BASIC26.35■■□□□ 1.81
ATP13A1Q9HD20 AL139393.2-201ENST00000608721 2025 ntBASIC26.34■■□□□ 1.81
ATP13A1Q9HD20 C5orf66-AS1-201ENST00000507035 843 ntTSL 2 BASIC26.34■■□□□ 1.81
ATP13A1Q9HD20 C11orf95-204ENST00000546282 390 ntTSL 3 BASIC26.33■■□□□ 1.81
ATP13A1Q9HD20 SECTM1-201ENST00000269389 2235 ntAPPRIS P2 TSL 1 (best) BASIC26.33■■□□□ 1.8
ATP13A1Q9HD20 ZDHHC16-201ENST00000345745 1519 ntTSL 1 (best) BASIC26.32■■□□□ 1.8
ATP13A1Q9HD20 CERS2-205ENST00000368954 2505 ntAPPRIS P1 TSL 1 (best) BASIC26.32■■□□□ 1.8
ATP13A1Q9HD20 EBPL-201ENST00000242827 914 ntAPPRIS P1 TSL 1 (best) BASIC26.29■■□□□ 1.8
ATP13A1Q9HD20 CLEC3B-202ENST00000428034 752 ntTSL 2 BASIC26.29■■□□□ 1.8
ATP13A1Q9HD20 AP004833.2-201ENST00000532228 1454 ntBASIC26.29■■□□□ 1.8
ATP13A1Q9HD20 INPP4A-203ENST00000409463 1565 ntTSL 1 (best) BASIC26.29■■□□□ 1.8
ATP13A1Q9HD20 MARCKSL1-201ENST00000329421 1699 ntAPPRIS P1 TSL 1 (best) BASIC26.28■■□□□ 1.8
ATP13A1Q9HD20 SIGMAR1-203ENST00000378892 1743 ntTSL 2 BASIC26.28■■□□□ 1.8
ATP13A1Q9HD20 TRIM52-AS1-203ENST00000509252 529 ntTSL 3 BASIC26.28■■□□□ 1.8
ATP13A1Q9HD20 CHML-204ENST00000638121 920 ntTSL 2 BASIC26.28■■□□□ 1.8
ATP13A1Q9HD20 RUNX2-203ENST00000371436 1588 ntAPPRIS ALT2 TSL 5 BASIC26.28■■□□□ 1.8
ATP13A1Q9HD20 SLC35D2-201ENST00000253270 1613 ntAPPRIS P1 TSL 1 (best) BASIC26.28■■□□□ 1.8
ATP13A1Q9HD20 MACF1-219ENST00000484793 834 ntTSL 2 BASIC26.27■■□□□ 1.8
ATP13A1Q9HD20 DUX4L13-201ENST00000554103 1267 ntBASIC26.27■■□□□ 1.8
ATP13A1Q9HD20 DUX4L15-201ENST00000611059 1267 ntBASIC26.27■■□□□ 1.8
ATP13A1Q9HD20 DUX4L23-201ENST00000615195 1269 ntBASIC26.27■■□□□ 1.8
ATP13A1Q9HD20 DUX4L24-201ENST00000617576 1269 ntBASIC26.27■■□□□ 1.8
ATP13A1Q9HD20 DUX4L22-201ENST00000618238 1269 ntBASIC26.27■■□□□ 1.8
ATP13A1Q9HD20 DUX4L20-201ENST00000619712 1269 ntBASIC26.27■■□□□ 1.8
ATP13A1Q9HD20 DUX4L21-201ENST00000622058 1269 ntBASIC26.27■■□□□ 1.8
ATP13A1Q9HD20 DUX4L10-201ENST00000622460 1267 ntBASIC26.27■■□□□ 1.8
ATP13A1Q9HD20 DUX4L25-201ENST00000624915 1269 ntBASIC26.27■■□□□ 1.8
ATP13A1Q9HD20 RHOC-202ENST00000339083 1418 ntAPPRIS P1 TSL 1 (best) BASIC26.27■■□□□ 1.8
ATP13A1Q9HD20 C2orf88-204ENST00000409870 1441 ntAPPRIS P1 TSL 2 BASIC26.27■■□□□ 1.8
ATP13A1Q9HD20 ITPKA-201ENST00000260386 1824 ntAPPRIS P1 TSL 1 (best) BASIC26.27■■□□□ 1.8
ATP13A1Q9HD20 SLC30A10-202ENST00000366926 1915 ntAPPRIS P1 TSL 1 (best) BASIC26.27■■□□□ 1.8
ATP13A1Q9HD20 ARHGAP22-202ENST00000374170 2107 ntTSL 5 BASIC26.27■■□□□ 1.8
ATP13A1Q9HD20 PXDC1-202ENST00000380283 2190 ntAPPRIS P1 TSL 1 (best) BASIC26.26■■□□□ 1.79
ATP13A1Q9HD20 EID2-201ENST00000390658 1629 ntAPPRIS P1 BASIC26.26■■□□□ 1.79
ATP13A1Q9HD20 MKRN1-202ENST00000443720 1601 ntAPPRIS ALT2 TSL 1 (best) BASIC26.26■■□□□ 1.79
ATP13A1Q9HD20 RRAD-202ENST00000420652 1476 ntAPPRIS P1 TSL 1 (best) BASIC26.26■■□□□ 1.79
ATP13A1Q9HD20 NKX2-1-204ENST00000522719 1417 ntAPPRIS P1 TSL 1 (best) BASIC26.26■■□□□ 1.79
ATP13A1Q9HD20 AGPS-202ENST00000409888 815 ntTSL 4 BASIC26.26■■□□□ 1.79
ATP13A1Q9HD20 AC231981.1-201ENST00000450917 974 ntTSL 3 BASIC26.26■■□□□ 1.79
ATP13A1Q9HD20 ZFAND2B-208ENST00000409594 2021 ntTSL 2 BASIC26.26■■□□□ 1.79
ATP13A1Q9HD20 MAPK8IP1P1-201ENST00000574657 1439 ntBASIC26.25■■□□□ 1.79
ATP13A1Q9HD20 HDGF-210ENST00000537739 2073 ntAPPRIS P1 TSL 1 (best) BASIC26.25■■□□□ 1.79
ATP13A1Q9HD20 EXOC3L4-201ENST00000380069 2293 ntAPPRIS P1 TSL 1 (best) BASIC26.25■■□□□ 1.79
ATP13A1Q9HD20 FEV-201ENST00000295727 1879 ntAPPRIS P1 TSL 1 (best) BASIC26.24■■□□□ 1.79
ATP13A1Q9HD20 P2RX2-203ENST00000350048 1344 ntTSL 1 (best) BASIC26.24■■□□□ 1.79
ATP13A1Q9HD20 RANBP1-202ENST00000402752 1132 ntAPPRIS ALT1 TSL 1 (best) BASIC26.24■■□□□ 1.79
ATP13A1Q9HD20 CR559946.2-201ENST00000623684 991 ntBASIC26.24■■□□□ 1.79
ATP13A1Q9HD20 RASL10A-202ENST00000401450 1720 ntTSL 2 BASIC26.24■■□□□ 1.79
ATP13A1Q9HD20 COL13A1-214ENST00000522165 2061 ntAPPRIS ALT2 TSL 5 BASIC26.24■■□□□ 1.79
ATP13A1Q9HD20 ST6GALNAC6-203ENST00000373142 2448 ntTSL 1 (best) BASIC26.24■■□□□ 1.79
ATP13A1Q9HD20 WNT5A-AS1-201ENST00000469484 500 ntTSL 3 BASIC26.23■■□□□ 1.79
ATP13A1Q9HD20 MIR3648-2-201ENST00000581792 180 ntBASIC26.23■■□□□ 1.79
ATP13A1Q9HD20 MIR3648-1-201ENST00000615959 180 ntBASIC26.23■■□□□ 1.79
ATP13A1Q9HD20 GDI1-215ENST00000630693 786 ntTSL 4 BASIC26.23■■□□□ 1.79
ATP13A1Q9HD20 SPATA5L1-208ENST00000638607 1863 ntTSL 2 BASIC26.23■■□□□ 1.79
ATP13A1Q9HD20 SLC35D2-203ENST00000375259 1361 ntTSL 1 (best) BASIC26.22■■□□□ 1.79
ATP13A1Q9HD20 CIB2-201ENST00000258930 1598 ntAPPRIS P1 TSL 1 (best) BASIC26.22■■□□□ 1.79
ATP13A1Q9HD20 MAZ-205ENST00000562337 1574 ntTSL 3 BASIC26.22■■□□□ 1.79
ATP13A1Q9HD20 MEST-211ENST00000437945 1455 ntTSL 5 BASIC26.22■■□□□ 1.79
ATP13A1Q9HD20 SLC16A8-201ENST00000320521 1878 ntAPPRIS P1 TSL 1 (best) BASIC26.21■■□□□ 1.79
ATP13A1Q9HD20 MTCH1-202ENST00000373627 2057 ntAPPRIS P1 TSL 1 (best) BASIC26.21■■□□□ 1.79
ATP13A1Q9HD20 HSD17B1-201ENST00000225929 1265 ntAPPRIS ALT2 TSL 2 BASIC26.21■■□□□ 1.79
ATP13A1Q9HD20 ING2-201ENST00000302327 1189 ntAPPRIS P1 TSL 1 (best) BASIC26.21■■□□□ 1.79
ATP13A1Q9HD20 AURKAIP1-203ENST00000338370 1072 ntAPPRIS P1 TSL 1 (best) BASIC26.21■■□□□ 1.79
ATP13A1Q9HD20 DNPEP-201ENST00000273075 2425 ntAPPRIS P3 TSL 1 (best) BASIC26.2■■□□□ 1.79
ATP13A1Q9HD20 PDPK1-203ENST00000389224 2416 ntTSL 2 BASIC26.2■■□□□ 1.79
ATP13A1Q9HD20 PHF20L1-207ENST00000395379 1998 ntTSL 5 BASIC26.2■■□□□ 1.79
ATP13A1Q9HD20 GADD45G-201ENST00000252506 1065 ntAPPRIS P1 TSL 1 (best) BASIC26.2■■□□□ 1.78
ATP13A1Q9HD20 CAAP1-205ENST00000520187 773 ntTSL 5 BASIC26.2■■□□□ 1.78
ATP13A1Q9HD20 AC016575.1-201ENST00000607026 382 ntBASIC26.2■■□□□ 1.78
ATP13A1Q9HD20 HLA-V-202ENST00000446817 847 ntBASIC26.19■■□□□ 1.78
ATP13A1Q9HD20 ANKRD16-201ENST00000191063 1567 ntTSL 3 BASIC26.19■■□□□ 1.78
ATP13A1Q9HD20 SHF-206ENST00000560471 2499 ntTSL 5 BASIC26.18■■□□□ 1.78
ATP13A1Q9HD20 RPUSD1-208ENST00000567114 1835 ntTSL 2 BASIC26.18■■□□□ 1.78
ATP13A1Q9HD20 PPP1CC-208ENST00000551676 1581 ntTSL 2 BASIC26.17■■□□□ 1.78
ATP13A1Q9HD20 GSX2-202ENST00000503800 1181 ntTSL 5 BASIC26.17■■□□□ 1.78
ATP13A1Q9HD20 HES6-205ENST00000409356 528 ntTSL 2 BASIC26.16■■□□□ 1.78
ATP13A1Q9HD20 MBP-237ENST00000579129 1052 ntTSL 5 BASIC26.16■■□□□ 1.78
ATP13A1Q9HD20 MPP6-203ENST00000409761 1703 ntTSL 5 BASIC26.16■■□□□ 1.78
ATP13A1Q9HD20 KRT18-201ENST00000388835 1562 ntAPPRIS P1 TSL 1 (best) BASIC26.16■■□□□ 1.78
ATP13A1Q9HD20 F8A3-201ENST00000622749 1759 ntAPPRIS P1 BASIC26.15■■□□□ 1.78
ATP13A1Q9HD20 EIF5A-202ENST00000336458 1511 ntAPPRIS P1 TSL 1 (best) BASIC26.15■■□□□ 1.78
ATP13A1Q9HD20 ZNF470-206ENST00000601902 1640 ntTSL 1 (best) BASIC26.15■■□□□ 1.78
ATP13A1Q9HD20 ACOT12-204ENST00000513751 612 ntTSL 1 (best) BASIC26.15■■□□□ 1.78
ATP13A1Q9HD20 AC100797.4-201ENST00000631653 1827 ntBASIC26.15■■□□□ 1.78
Retrieved 100 of 98,524 protein–RNA pairs in 7.9 ms