Protein–RNA interactions for Protein: Q9HBW1

LRRC4, Leucine-rich repeat-containing protein 4, humanhuman

Predictions only

Length 653 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LRRC4Q9HBW1 HOXD13-201ENST00000392539 2240 ntAPPRIS P1 TSL 1 (best) BASIC27.08■■□□□ 1.93
LRRC4Q9HBW1 DUX4L11-201ENST00000611504 1267 ntBASIC27.08■■□□□ 1.93
LRRC4Q9HBW1 DUX4L12-201ENST00000614593 1267 ntBASIC27.08■■□□□ 1.93
LRRC4Q9HBW1 DUX4L14-201ENST00000621227 1267 ntBASIC27.08■■□□□ 1.93
LRRC4Q9HBW1 INPP4A-203ENST00000409463 1565 ntTSL 1 (best) BASIC27.08■■□□□ 1.93
LRRC4Q9HBW1 SLC35D2-201ENST00000253270 1613 ntAPPRIS P1 TSL 1 (best) BASIC27.08■■□□□ 1.93
LRRC4Q9HBW1 ARHGEF7-205ENST00000375739 5375 ntTSL 1 (best) BASIC27.08■■□□□ 1.92
LRRC4Q9HBW1 ITPKA-201ENST00000260386 1824 ntAPPRIS P1 TSL 1 (best) BASIC27.07■■□□□ 1.92
LRRC4Q9HBW1 ZDHHC16-201ENST00000345745 1519 ntTSL 1 (best) BASIC27.07■■□□□ 1.92
LRRC4Q9HBW1 PQLC1-202ENST00000357575 2475 ntAPPRIS ALT1 TSL 5 BASIC27.07■■□□□ 1.92
LRRC4Q9HBW1 MTMR1-214ENST00000542156 1227 ntTSL 1 (best) BASIC27.07■■□□□ 1.92
LRRC4Q9HBW1 FKBP1A-210ENST00000614856 562 ntTSL 2 BASIC27.07■■□□□ 1.92
LRRC4Q9HBW1 WDSUB1-205ENST00000409990 1920 ntAPPRIS P1 TSL 2 BASIC27.06■■□□□ 1.92
LRRC4Q9HBW1 MKRN1-202ENST00000443720 1601 ntAPPRIS ALT2 TSL 1 (best) BASIC27.06■■□□□ 1.92
LRRC4Q9HBW1 MARCKSL1-201ENST00000329421 1699 ntAPPRIS P1 TSL 1 (best) BASIC27.06■■□□□ 1.92
LRRC4Q9HBW1 PVT1-219ENST00000523427 938 ntTSL 3 BASIC27.06■■□□□ 1.92
LRRC4Q9HBW1 NKX2-1-204ENST00000522719 1417 ntAPPRIS P1 TSL 1 (best) BASIC27.06■■□□□ 1.92
LRRC4Q9HBW1 EID2-201ENST00000390658 1629 ntAPPRIS P1 BASIC27.05■■□□□ 1.92
LRRC4Q9HBW1 C5orf66-AS1-201ENST00000507035 843 ntTSL 2 BASIC27.05■■□□□ 1.92
LRRC4Q9HBW1 C11orf95-204ENST00000546282 390 ntTSL 3 BASIC27.05■■□□□ 1.92
LRRC4Q9HBW1 AC139426.1-201ENST00000568218 2529 ntBASIC27.05■■□□□ 1.92
LRRC4Q9HBW1 TMEM268-201ENST00000288502 2314 ntAPPRIS P3 TSL 1 (best) BASIC27.04■■□□□ 1.92
LRRC4Q9HBW1 RNF166-209ENST00000567844 633 ntTSL 5 BASIC27.04■■□□□ 1.92
LRRC4Q9HBW1 AC013394.1-201ENST00000629685 808 ntAPPRIS P1 TSL 5 BASIC27.04■■□□□ 1.92
LRRC4Q9HBW1 CIB2-201ENST00000258930 1598 ntAPPRIS P1 TSL 1 (best) BASIC27.03■■□□□ 1.92
LRRC4Q9HBW1 RASL10A-202ENST00000401450 1720 ntTSL 2 BASIC27.03■■□□□ 1.92
LRRC4Q9HBW1 MAPK8IP1P1-201ENST00000574657 1439 ntBASIC27.03■■□□□ 1.92
LRRC4Q9HBW1 PHF20L1-207ENST00000395379 1998 ntTSL 5 BASIC27.02■■□□□ 1.92
LRRC4Q9HBW1 MEST-211ENST00000437945 1455 ntTSL 5 BASIC27.02■■□□□ 1.92
LRRC4Q9HBW1 C2orf88-204ENST00000409870 1441 ntAPPRIS P1 TSL 2 BASIC27.02■■□□□ 1.92
LRRC4Q9HBW1 AC187653.1-201ENST00000506382 702 ntAPPRIS P1 TSL 5 BASIC27.02■■□□□ 1.92
LRRC4Q9HBW1 RTN4R-201ENST00000043402 2157 ntAPPRIS P2 TSL 1 (best) BASIC27.02■■□□□ 1.92
LRRC4Q9HBW1 SPATA5L1-208ENST00000638607 1863 ntTSL 2 BASIC27.02■■□□□ 1.92
LRRC4Q9HBW1 PPP1CC-208ENST00000551676 1581 ntTSL 2 BASIC27.01■■□□□ 1.92
LRRC4Q9HBW1 MTCH1-202ENST00000373627 2057 ntAPPRIS P1 TSL 1 (best) BASIC27.01■■□□□ 1.91
LRRC4Q9HBW1 SLC30A10-202ENST00000366926 1915 ntAPPRIS P1 TSL 1 (best) BASIC27.01■■□□□ 1.91
LRRC4Q9HBW1 CHML-204ENST00000638121 920 ntTSL 2 BASIC27.01■■□□□ 1.91
LRRC4Q9HBW1 ADGRB2-204ENST00000398542 5176 ntTSL 5 BASIC27.01■■□□□ 1.91
LRRC4Q9HBW1 RUNX2-203ENST00000371436 1588 ntAPPRIS ALT2 TSL 5 BASIC27.01■■□□□ 1.91
LRRC4Q9HBW1 MAZ-205ENST00000562337 1574 ntTSL 3 BASIC27.01■■□□□ 1.91
LRRC4Q9HBW1 DNPEP-201ENST00000273075 2425 ntAPPRIS P3 TSL 1 (best) BASIC27■■□□□ 1.91
LRRC4Q9HBW1 SLC16A8-201ENST00000320521 1878 ntAPPRIS P1 TSL 1 (best) BASIC27■■□□□ 1.91
LRRC4Q9HBW1 EBPL-201ENST00000242827 914 ntAPPRIS P1 TSL 1 (best) BASIC27■■□□□ 1.91
LRRC4Q9HBW1 AC231981.1-201ENST00000450917 974 ntTSL 3 BASIC27■■□□□ 1.91
LRRC4Q9HBW1 DUX4L13-201ENST00000554103 1267 ntBASIC27■■□□□ 1.91
LRRC4Q9HBW1 DUX4L15-201ENST00000611059 1267 ntBASIC27■■□□□ 1.91
LRRC4Q9HBW1 DUX4L23-201ENST00000615195 1269 ntBASIC27■■□□□ 1.91
LRRC4Q9HBW1 DUX4L24-201ENST00000617576 1269 ntBASIC27■■□□□ 1.91
LRRC4Q9HBW1 DUX4L22-201ENST00000618238 1269 ntBASIC27■■□□□ 1.91
LRRC4Q9HBW1 DUX4L20-201ENST00000619712 1269 ntBASIC27■■□□□ 1.91
LRRC4Q9HBW1 DUX4L21-201ENST00000622058 1269 ntBASIC27■■□□□ 1.91
LRRC4Q9HBW1 DUX4L10-201ENST00000622460 1267 ntBASIC27■■□□□ 1.91
LRRC4Q9HBW1 DUX4L25-201ENST00000624915 1269 ntBASIC27■■□□□ 1.91
LRRC4Q9HBW1 F8A3-201ENST00000622749 1759 ntAPPRIS P1 BASIC26.99■■□□□ 1.91
LRRC4Q9HBW1 MAF-201ENST00000326043 2646 ntAPPRIS P3 TSL 1 (best) BASIC26.99■■□□□ 1.91
LRRC4Q9HBW1 AGPS-202ENST00000409888 815 ntTSL 4 BASIC26.98■■□□□ 1.91
LRRC4Q9HBW1 CLEC3B-202ENST00000428034 752 ntTSL 2 BASIC26.98■■□□□ 1.91
LRRC4Q9HBW1 SNX24-201ENST00000261369 2158 ntAPPRIS P1 TSL 1 (best) BASIC26.98■■□□□ 1.91
LRRC4Q9HBW1 TPRA1-209ENST00000489960 1903 ntAPPRIS P1 TSL 5 BASIC26.98■■□□□ 1.91
LRRC4Q9HBW1 RPUSD1-208ENST00000567114 1835 ntTSL 2 BASIC26.97■■□□□ 1.91
LRRC4Q9HBW1 MPP6-203ENST00000409761 1703 ntTSL 5 BASIC26.97■■□□□ 1.91
LRRC4Q9HBW1 TRIM52-AS1-203ENST00000509252 529 ntTSL 3 BASIC26.97■■□□□ 1.91
LRRC4Q9HBW1 RHOC-202ENST00000339083 1418 ntAPPRIS P1 TSL 1 (best) BASIC26.97■■□□□ 1.91
LRRC4Q9HBW1 HDGF-210ENST00000537739 2073 ntAPPRIS P1 TSL 1 (best) BASIC26.96■■□□□ 1.91
LRRC4Q9HBW1 RRAD-202ENST00000420652 1476 ntAPPRIS P1 TSL 1 (best) BASIC26.96■■□□□ 1.91
LRRC4Q9HBW1 CERS2-205ENST00000368954 2505 ntAPPRIS P1 TSL 1 (best) BASIC26.96■■□□□ 1.91
LRRC4Q9HBW1 FHL2-202ENST00000344213 1769 ntTSL 1 (best) BASIC26.95■■□□□ 1.9
LRRC4Q9HBW1 COL13A1-214ENST00000522165 2061 ntAPPRIS ALT2 TSL 5 BASIC26.95■■□□□ 1.9
LRRC4Q9HBW1 RANBP1-202ENST00000402752 1132 ntAPPRIS ALT1 TSL 1 (best) BASIC26.95■■□□□ 1.9
LRRC4Q9HBW1 AC100797.4-201ENST00000631653 1827 ntBASIC26.95■■□□□ 1.9
LRRC4Q9HBW1 VWA1-201ENST00000338660 2147 ntTSL 2 BASIC26.95■■□□□ 1.9
LRRC4Q9HBW1 P2RX2-203ENST00000350048 1344 ntTSL 1 (best) BASIC26.94■■□□□ 1.9
LRRC4Q9HBW1 FKBP1A-205ENST00000439640 1583 ntTSL 3 BASIC26.94■■□□□ 1.9
LRRC4Q9HBW1 MACF1-219ENST00000484793 834 ntTSL 2 BASIC26.94■■□□□ 1.9
LRRC4Q9HBW1 EFNA1-202ENST00000368407 1926 ntAPPRIS P1 TSL 1 (best) BASIC26.94■■□□□ 1.9
LRRC4Q9HBW1 RRAGC-201ENST00000373001 2732 ntAPPRIS P1 TSL 1 (best) BASIC26.93■■□□□ 1.9
LRRC4Q9HBW1 GSX2-202ENST00000503800 1181 ntTSL 5 BASIC26.93■■□□□ 1.9
LRRC4Q9HBW1 EIF5A-202ENST00000336458 1511 ntAPPRIS P1 TSL 1 (best) BASIC26.93■■□□□ 1.9
LRRC4Q9HBW1 MEX3D-201ENST00000402693 2850 ntAPPRIS P2 TSL 1 (best) BASIC26.93■■□□□ 1.9
LRRC4Q9HBW1 MAPK13-201ENST00000211287 2052 ntAPPRIS P1 TSL 1 (best) BASIC26.93■■□□□ 1.9
LRRC4Q9HBW1 ANKRD16-201ENST00000191063 1567 ntTSL 3 BASIC26.92■■□□□ 1.9
LRRC4Q9HBW1 SECTM1-201ENST00000269389 2235 ntAPPRIS P2 TSL 1 (best) BASIC26.92■■□□□ 1.9
LRRC4Q9HBW1 LDLRAD4-218ENST00000592991 1640 ntTSL 1 (best) BASIC26.92■■□□□ 1.9
LRRC4Q9HBW1 ZNF470-206ENST00000601902 1640 ntTSL 1 (best) BASIC26.92■■□□□ 1.9
LRRC4Q9HBW1 GDI1-215ENST00000630693 786 ntTSL 4 BASIC26.92■■□□□ 1.9
LRRC4Q9HBW1 SLC35D2-203ENST00000375259 1361 ntTSL 1 (best) BASIC26.92■■□□□ 1.9
LRRC4Q9HBW1 ANKS1B-203ENST00000341752 2115 ntTSL 2 BASIC26.92■■□□□ 1.9
LRRC4Q9HBW1 AC027237.3-202ENST00000558617 1778 ntTSL 2 BASIC26.92■■□□□ 1.9
LRRC4Q9HBW1 AURKAIP1-203ENST00000338370 1072 ntAPPRIS P1 TSL 1 (best) BASIC26.91■■□□□ 1.9
LRRC4Q9HBW1 CAAP1-205ENST00000520187 773 ntTSL 5 BASIC26.91■■□□□ 1.9
LRRC4Q9HBW1 MIR3648-2-201ENST00000581792 180 ntBASIC26.91■■□□□ 1.9
LRRC4Q9HBW1 MIR3648-1-201ENST00000615959 180 ntBASIC26.91■■□□□ 1.9
LRRC4Q9HBW1 CR559946.2-201ENST00000623684 991 ntBASIC26.91■■□□□ 1.9
LRRC4Q9HBW1 MYCL-202ENST00000372816 1688 ntAPPRIS P3 TSL 2 BASIC26.91■■□□□ 1.9
LRRC4Q9HBW1 PCSK6-201ENST00000331826 2309 ntTSL 5 BASIC26.9■■□□□ 1.9
LRRC4Q9HBW1 PDPK1-203ENST00000389224 2416 ntTSL 2 BASIC26.9■■□□□ 1.9
LRRC4Q9HBW1 CHST14-202ENST00000559991 1968 ntTSL 5 BASIC26.9■■□□□ 1.9
LRRC4Q9HBW1 HSD17B1-201ENST00000225929 1265 ntAPPRIS ALT2 TSL 2 BASIC26.9■■□□□ 1.9
LRRC4Q9HBW1 GADD45G-201ENST00000252506 1065 ntAPPRIS P1 TSL 1 (best) BASIC26.9■■□□□ 1.9
LRRC4Q9HBW1 TNFRSF25-205ENST00000377782 1632 ntAPPRIS P4 TSL 1 (best) BASIC26.9■■□□□ 1.9
Retrieved 100 of 98,524 protein–RNA pairs in 41.2 ms