Protein–RNA interactions for Protein: Q96NY8

NECTIN4, Nectin-4, humanhuman

Predictions only

Length 510 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NECTIN4Q96NY8 IGFBPL1-201ENST00000377694 1093 ntAPPRIS P1 TSL 2 BASIC27.06■■□□□ 1.92
NECTIN4Q96NY8 AL033527.3-201ENST00000566366 1196 ntBASIC27.06■■□□□ 1.92
NECTIN4Q96NY8 CHST11-203ENST00000547956 936 ntTSL 2 BASIC27.05■■□□□ 1.92
NECTIN4Q96NY8 GPI-201ENST00000356487 2210 ntAPPRIS P1 TSL 1 (best) BASIC27.04■■□□□ 1.92
NECTIN4Q96NY8 GKAP1-203ENST00000376371 1778 ntAPPRIS P1 TSL 1 (best) BASIC27.04■■□□□ 1.92
NECTIN4Q96NY8 RASSF7-202ENST00000397583 1928 ntAPPRIS P3 TSL 1 (best) BASIC27.04■■□□□ 1.92
NECTIN4Q96NY8 UCK1-201ENST00000372208 2063 ntTSL 1 (best) BASIC27.04■■□□□ 1.92
NECTIN4Q96NY8 AC018358.1-201ENST00000631079 1402 ntBASIC27.03■■□□□ 1.92
NECTIN4Q96NY8 PMS1-220ENST00000618056 1468 ntTSL 5 BASIC27.02■■□□□ 1.92
NECTIN4Q96NY8 HYI-213ENST00000583037 1322 ntTSL 5 BASIC27.02■■□□□ 1.92
NECTIN4Q96NY8 MXD3-208ENST00000513063 861 ntAPPRIS P1 TSL 5 BASIC27.02■■□□□ 1.92
NECTIN4Q96NY8 COQ2-202ENST00000311469 1641 ntAPPRIS P2 TSL 1 (best) BASIC27.01■■□□□ 1.92
NECTIN4Q96NY8 TRIM52-AS1-202ENST00000507434 672 ntTSL 1 (best) BASIC27.01■■□□□ 1.91
NECTIN4Q96NY8 HOXD-AS2-201ENST00000426965 927 ntTSL 1 (best) BASIC27■■□□□ 1.91
NECTIN4Q96NY8 GSX2-202ENST00000503800 1181 ntTSL 5 BASIC27■■□□□ 1.91
NECTIN4Q96NY8 AC060814.1-201ENST00000554326 538 ntBASIC27■■□□□ 1.91
NECTIN4Q96NY8 U85056.1-201ENST00000616429 682 ntBASIC27■■□□□ 1.91
NECTIN4Q96NY8 AC148477.6-201ENST00000623746 465 ntBASIC27■■□□□ 1.91
NECTIN4Q96NY8 ENKD1-201ENST00000243878 1579 ntAPPRIS P1 TSL 1 (best) BASIC27■■□□□ 1.91
NECTIN4Q96NY8 LRRC61-202ENST00000359623 1877 ntAPPRIS P1 TSL 2 BASIC27■■□□□ 1.91
NECTIN4Q96NY8 IFNGR2-201ENST00000290219 2221 ntAPPRIS P3 TSL 1 (best) BASIC26.99■■□□□ 1.91
NECTIN4Q96NY8 PELI3-203ENST00000524466 1671 ntTSL 1 (best) BASIC26.98■■□□□ 1.91
NECTIN4Q96NY8 ACOT1-202ENST00000557556 1271 ntTSL 1 (best) BASIC26.98■■□□□ 1.91
NECTIN4Q96NY8 HOXB3-210ENST00000489475 1845 ntTSL 2 BASIC26.97■■□□□ 1.91
NECTIN4Q96NY8 CAPNS1-201ENST00000246533 1918 ntAPPRIS P2 TSL 1 (best) BASIC26.97■■□□□ 1.91
NECTIN4Q96NY8 PI4KAP1-202ENST00000611748 1906 ntTSL 1 (best) BASIC26.97■■□□□ 1.91
NECTIN4Q96NY8 CTSZ-201ENST00000217131 1495 ntAPPRIS P1 TSL 1 (best) BASIC26.97■■□□□ 1.91
NECTIN4Q96NY8 ATOH7-201ENST00000373673 1480 ntAPPRIS P1 BASIC26.97■■□□□ 1.91
NECTIN4Q96NY8 BCL7B-201ENST00000223368 1975 ntAPPRIS P1 TSL 1 (best) BASIC26.97■■□□□ 1.91
NECTIN4Q96NY8 PLPPR3-204ENST00000520876 2328 ntAPPRIS ALT2 TSL 1 (best) BASIC26.96■■□□□ 1.91
NECTIN4Q96NY8 AC135983.2-203ENST00000454486 1613 ntBASIC26.96■■□□□ 1.91
NECTIN4Q96NY8 FGF13-AS1-202ENST00000446383 584 ntTSL 3 BASIC26.95■■□□□ 1.9
NECTIN4Q96NY8 QDPR-208ENST00000513615 1188 ntTSL 2 BASIC26.95■■□□□ 1.9
NECTIN4Q96NY8 PLEKHF2-202ENST00000519516 1144 ntAPPRIS P1 TSL 3 BASIC26.94■■□□□ 1.9
NECTIN4Q96NY8 EIF5A-202ENST00000336458 1511 ntAPPRIS P1 TSL 1 (best) BASIC26.94■■□□□ 1.9
NECTIN4Q96NY8 TMEM55B-202ENST00000398020 1696 ntAPPRIS ALT1 TSL 1 (best) BASIC26.93■■□□□ 1.9
NECTIN4Q96NY8 C20orf24-203ENST00000373852 1059 ntTSL 1 (best) BASIC26.93■■□□□ 1.9
NECTIN4Q96NY8 KCTD15-206ENST00000588881 1211 ntAPPRIS P1 TSL 2 BASIC26.93■■□□□ 1.9
NECTIN4Q96NY8 OLFM2-201ENST00000264833 2019 ntAPPRIS P1 TSL 1 (best) BASIC26.93■■□□□ 1.9
NECTIN4Q96NY8 WHAMMP2-203ENST00000563942 1603 ntBASIC26.93■■□□□ 1.9
NECTIN4Q96NY8 TSPY13P-201ENST00000338964 914 ntBASIC26.92■■□□□ 1.9
NECTIN4Q96NY8 BTBD19-201ENST00000409335 1214 ntTSL 5 BASIC26.92■■□□□ 1.9
NECTIN4Q96NY8 SAP25-204ENST00000622764 1031 ntAPPRIS ALT2 TSL 5 BASIC26.91■■□□□ 1.9
NECTIN4Q96NY8 GPR137-202ENST00000377702 1478 ntTSL 1 (best) BASIC26.91■■□□□ 1.9
NECTIN4Q96NY8 AC127502.1-201ENST00000399971 1502 ntBASIC26.9■■□□□ 1.9
NECTIN4Q96NY8 AC110285.7-201ENST00000624417 1536 ntBASIC26.9■■□□□ 1.9
NECTIN4Q96NY8 YBX2-201ENST00000007699 1590 ntAPPRIS P1 TSL 1 (best) BASIC26.9■■□□□ 1.9
NECTIN4Q96NY8 C16orf59-202ENST00000483320 1709 ntAPPRIS ALT2 TSL 2 BASIC26.9■■□□□ 1.9
NECTIN4Q96NY8 ENDOG-201ENST00000372642 1172 ntAPPRIS P1 TSL 1 (best) BASIC26.89■■□□□ 1.9
NECTIN4Q96NY8 LINC01770-201ENST00000417917 634 ntTSL 2 BASIC26.89■■□□□ 1.9
NECTIN4Q96NY8 C9orf50-201ENST00000372478 1620 ntAPPRIS P2 TSL 2 BASIC26.89■■□□□ 1.9
NECTIN4Q96NY8 LACTBL1-202ENST00000618559 1500 ntAPPRIS ALT2 TSL 5 BASIC26.89■■□□□ 1.89
NECTIN4Q96NY8 MTCP1-202ENST00000369476 2274 ntAPPRIS P1 TSL 3 BASIC26.88■■□□□ 1.89
NECTIN4Q96NY8 CAPNS1-216ENST00000628306 1389 ntTSL 5 BASIC26.88■■□□□ 1.89
NECTIN4Q96NY8 TBX2-AS1-202ENST00000589814 539 ntTSL 3 BASIC26.88■■□□□ 1.89
NECTIN4Q96NY8 SSBP3-204ENST00000371320 2077 ntAPPRIS P3 TSL 1 (best) BASIC26.88■■□□□ 1.89
NECTIN4Q96NY8 GATA6-202ENST00000581694 2057 ntAPPRIS P1 TSL 1 (best) BASIC26.88■■□□□ 1.89
NECTIN4Q96NY8 EPB41L4A-AS2-201ENST00000623705 1396 ntBASIC26.87■■□□□ 1.89
NECTIN4Q96NY8 HOMER3-207ENST00000594794 903 ntTSL 5 BASIC26.87■■□□□ 1.89
NECTIN4Q96NY8 TOMM40-201ENST00000252487 1707 ntAPPRIS P2 TSL 1 (best) BASIC26.87■■□□□ 1.89
NECTIN4Q96NY8 TOMM40-202ENST00000405636 1709 ntAPPRIS P2 TSL 1 (best) BASIC26.87■■□□□ 1.89
NECTIN4Q96NY8 CARS2-201ENST00000257347 1879 ntAPPRIS P1 TSL 1 (best) BASIC26.86■■□□□ 1.89
NECTIN4Q96NY8 UPF3A-209ENST00000492270 494 ntTSL 2 BASIC26.86■■□□□ 1.89
NECTIN4Q96NY8 RPS2-210ENST00000530225 765 ntTSL 2 BASIC26.86■■□□□ 1.89
NECTIN4Q96NY8 GFER-205ENST00000569451 517 ntTSL 5 BASIC26.86■■□□□ 1.89
NECTIN4Q96NY8 AC092296.2-201ENST00000589470 999 ntBASIC26.86■■□□□ 1.89
NECTIN4Q96NY8 MARCKSL1-201ENST00000329421 1699 ntAPPRIS P1 TSL 1 (best) BASIC26.85■■□□□ 1.89
NECTIN4Q96NY8 KRT18P60-201ENST00000312876 1297 ntBASIC26.85■■□□□ 1.89
NECTIN4Q96NY8 AC004987.1-201ENST00000428627 508 ntBASIC26.85■■□□□ 1.89
NECTIN4Q96NY8 GNAS-AS1_1.1-201ENST00000621898 103 ntBASIC26.85■■□□□ 1.89
NECTIN4Q96NY8 MCCD1-201ENST00000376191 955 ntAPPRIS P1 TSL 1 (best) BASIC26.84■■□□□ 1.89
NECTIN4Q96NY8 ATP5G2P3-201ENST00000429083 425 ntBASIC26.84■■□□□ 1.89
NECTIN4Q96NY8 KMT2E-AS1-201ENST00000453677 736 ntTSL 3 BASIC26.84■■□□□ 1.89
NECTIN4Q96NY8 NPC2-207ENST00000555619 1035 ntAPPRIS P2 TSL 1 (best) BASIC26.84■■□□□ 1.89
NECTIN4Q96NY8 GRK6-206ENST00000507633 1660 ntTSL 5 BASIC26.84■■□□□ 1.89
NECTIN4Q96NY8 CCDC37-AS1-202ENST00000506660 986 ntTSL 1 (best) BASIC26.83■■□□□ 1.89
NECTIN4Q96NY8 TTC39C-209ENST00000584250 1048 ntTSL 1 (best) BASIC26.83■■□□□ 1.89
NECTIN4Q96NY8 GAL3ST3-203ENST00000527878 1599 ntAPPRIS P1 TSL 1 (best) BASIC26.83■■□□□ 1.89
NECTIN4Q96NY8 ECEL1P2-201ENST00000461596 1295 ntBASIC26.82■■□□□ 1.88
NECTIN4Q96NY8 MZT2B-201ENST00000281871 933 ntAPPRIS P3 TSL 1 (best) BASIC26.81■■□□□ 1.88
NECTIN4Q96NY8 MZT2A-201ENST00000309451 624 ntAPPRIS P1 TSL 1 (best) BASIC26.81■■□□□ 1.88
NECTIN4Q96NY8 RAB4B-203ENST00000594800 1173 ntAPPRIS P1 TSL 5 BASIC26.81■■□□□ 1.88
NECTIN4Q96NY8 OPRD1-202ENST00000621425 1217 ntTSL 1 (best) BASIC26.81■■□□□ 1.88
NECTIN4Q96NY8 ZMYND19-201ENST00000298585 1375 ntAPPRIS P1 TSL 1 (best) BASIC26.81■■□□□ 1.88
NECTIN4Q96NY8 MAPK8IP1P1-201ENST00000574657 1439 ntBASIC26.81■■□□□ 1.88
NECTIN4Q96NY8 CDC34-201ENST00000215574 1471 ntAPPRIS P1 TSL 1 (best) BASIC26.81■■□□□ 1.88
NECTIN4Q96NY8 MIR219A2-201ENST00000608502 1504 ntBASIC26.8■■□□□ 1.88
NECTIN4Q96NY8 HSD11B1L-202ENST00000339423 1660 ntAPPRIS P3 TSL 1 (best) BASIC26.8■■□□□ 1.88
NECTIN4Q96NY8 LSM6-202ENST00000502781 1352 ntAPPRIS P1 TSL 1 (best) BASIC26.8■■□□□ 1.88
NECTIN4Q96NY8 MAPK12-201ENST00000215659 1918 ntAPPRIS P1 TSL 1 (best) BASIC26.79■■□□□ 1.88
NECTIN4Q96NY8 AC126177.7-201ENST00000547904 679 ntBASIC26.79■■□□□ 1.88
NECTIN4Q96NY8 DSG2-202ENST00000585206 1081 ntTSL 2 BASIC26.79■■□□□ 1.88
NECTIN4Q96NY8 PLEKHJ1-204ENST00000586608 935 ntTSL 3 BASIC26.79■■□□□ 1.88
NECTIN4Q96NY8 HOMER3-202ENST00000392351 1557 ntAPPRIS P3 TSL 1 (best) BASIC26.79■■□□□ 1.88
NECTIN4Q96NY8 GUK1-208ENST00000366728 842 ntTSL 2 BASIC26.78■■□□□ 1.88
NECTIN4Q96NY8 AQP1-203ENST00000409899 1009 ntTSL 1 (best) BASIC26.78■■□□□ 1.88
NECTIN4Q96NY8 SLC9A3-AS1-207ENST00000607286 1357 ntTSL 5 BASIC26.78■■□□□ 1.88
NECTIN4Q96NY8 FCGRT-217ENST00000599988 660 ntTSL 5 BASIC26.77■■□□□ 1.88
NECTIN4Q96NY8 TXNL4A-208ENST00000588162 752 ntTSL 2 BASIC26.76■■□□□ 1.87
NECTIN4Q96NY8 HMX1-201ENST00000400677 1895 ntAPPRIS P1 TSL 1 (best) BASIC26.76■■□□□ 1.87
Retrieved 100 of 98,524 protein–RNA pairs in 141.5 ms