Protein–RNA interactions for Protein: Q96N87

SLC6A18, Sodium-dependent neutral amino acid transporter B(0)AT3, humanhuman

Predictions only

Length 628 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SLC6A18Q96N87 S1PR4-201ENST00000246115 1565 ntAPPRIS P1 BASIC25.65■■□□□ 1.7
SLC6A18Q96N87 ATRNL1-207ENST00000527407 1583 ntTSL 5 BASIC25.65■■□□□ 1.7
SLC6A18Q96N87 TRIOBP-205ENST00000407319 2125 ntAPPRIS P3 TSL 1 (best) BASIC25.64■■□□□ 1.7
SLC6A18Q96N87 TAZ-215ENST00000612460 1793 ntAPPRIS P1 TSL 1 (best) BASIC25.64■■□□□ 1.7
SLC6A18Q96N87 WHAMMP2-203ENST00000563942 1603 ntBASIC25.64■■□□□ 1.7
SLC6A18Q96N87 U2AF1-203ENST00000398137 1019 ntTSL 1 (best) BASIC25.64■■□□□ 1.7
SLC6A18Q96N87 BANF1-208ENST00000533166 1135 ntAPPRIS P1 TSL 2 BASIC25.64■■□□□ 1.7
SLC6A18Q96N87 U2AF1L5-212ENST00000639996 1019 ntTSL 1 (best) BASIC25.64■■□□□ 1.7
SLC6A18Q96N87 CBLN1-201ENST00000219197 2435 ntAPPRIS P1 TSL 1 (best) BASIC25.64■■□□□ 1.69
SLC6A18Q96N87 GPX1-201ENST00000419349 1106 ntBASIC25.63■■□□□ 1.69
SLC6A18Q96N87 AC007383.2-202ENST00000435627 482 ntTSL 2 BASIC25.63■■□□□ 1.69
SLC6A18Q96N87 AC068134.2-201ENST00000437095 576 ntTSL 3 BASIC25.63■■□□□ 1.69
SLC6A18Q96N87 HSD11B1L-202ENST00000339423 1660 ntAPPRIS P3 TSL 1 (best) BASIC25.63■■□□□ 1.69
SLC6A18Q96N87 FADS3-201ENST00000278829 1779 ntAPPRIS P1 TSL 1 (best) BASIC25.63■■□□□ 1.69
SLC6A18Q96N87 AL135925.1-201ENST00000605920 1701 ntBASIC25.63■■□□□ 1.69
SLC6A18Q96N87 FAM168B-201ENST00000389915 944 ntAPPRIS P1 TSL 3 BASIC25.62■■□□□ 1.69
SLC6A18Q96N87 RARRES2P2-201ENST00000394842 485 ntBASIC25.62■■□□□ 1.69
SLC6A18Q96N87 KLHL35-204ENST00000539798 1936 ntAPPRIS P1 TSL 1 (best) BASIC25.62■■□□□ 1.69
SLC6A18Q96N87 AC135983.2-203ENST00000454486 1613 ntBASIC25.62■■□□□ 1.69
SLC6A18Q96N87 FSD1L-208ENST00000495708 1906 ntTSL 1 (best) BASIC25.61■■□□□ 1.69
SLC6A18Q96N87 C16orf59-202ENST00000483320 1709 ntAPPRIS ALT2 TSL 2 BASIC25.6■■□□□ 1.69
SLC6A18Q96N87 TSPAN4-207ENST00000397411 1025 ntAPPRIS P1 TSL 2 BASIC25.6■■□□□ 1.69
SLC6A18Q96N87 NPC2-207ENST00000555619 1035 ntAPPRIS P2 TSL 1 (best) BASIC25.6■■□□□ 1.69
SLC6A18Q96N87 BLOC1S3-202ENST00000587722 732 ntAPPRIS P1 BASIC25.59■■□□□ 1.69
SLC6A18Q96N87 HAUS7-201ENST00000370210 1593 ntAPPRIS ALT2 TSL 2 BASIC25.58■■□□□ 1.69
SLC6A18Q96N87 CEP120-209ENST00000515110 606 ntTSL 3 BASIC25.58■■□□□ 1.69
SLC6A18Q96N87 AC018755.3-201ENST00000598755 664 ntTSL 2 BASIC25.58■■□□□ 1.69
SLC6A18Q96N87 HNRNPAB-205ENST00000506259 1674 ntAPPRIS ALT2 TSL 1 (best) BASIC25.58■■□□□ 1.68
SLC6A18Q96N87 ACTG1-210ENST00000575842 2256 ntAPPRIS P1 TSL 1 (best) BASIC25.57■■□□□ 1.68
SLC6A18Q96N87 GNAI2-202ENST00000313601 2464 ntAPPRIS P1 TSL 1 (best) BASIC25.57■■□□□ 1.68
SLC6A18Q96N87 IGFBP2-201ENST00000233809 1439 ntAPPRIS P1 TSL 1 (best) BASIC25.56■■□□□ 1.68
SLC6A18Q96N87 MAFA-201ENST00000333480 2347 ntAPPRIS P1 BASIC25.56■■□□□ 1.68
SLC6A18Q96N87 HSD17B12-202ENST00000395700 994 ntTSL 1 (best) BASIC25.56■■□□□ 1.68
SLC6A18Q96N87 GSX2-202ENST00000503800 1181 ntTSL 5 BASIC25.56■■□□□ 1.68
SLC6A18Q96N87 CAPNS1-201ENST00000246533 1918 ntAPPRIS P2 TSL 1 (best) BASIC25.56■■□□□ 1.68
SLC6A18Q96N87 RAMP2-AS1-202ENST00000589716 1985 ntTSL 5 BASIC25.56■■□□□ 1.68
SLC6A18Q96N87 KCNK3-202ENST00000620977 1956 ntTSL 1 (best) BASIC25.56■■□□□ 1.68
SLC6A18Q96N87 MAP3K8-203ENST00000375322 932 ntTSL 2 BASIC25.55■■□□□ 1.68
SLC6A18Q96N87 BOK-AS1-201ENST00000434306 643 ntTSL 1 (best) BASIC25.55■■□□□ 1.68
SLC6A18Q96N87 LINC01918-201ENST00000436841 797 ntTSL 2 BASIC25.55■■□□□ 1.68
SLC6A18Q96N87 LINC01896-206ENST00000575722 1256 ntTSL 2 BASIC25.55■■□□□ 1.68
SLC6A18Q96N87 FOXD3-201ENST00000371116 2086 ntAPPRIS P1 BASIC25.55■■□□□ 1.68
SLC6A18Q96N87 C1QTNF8-201ENST00000328449 1627 ntAPPRIS P1 TSL 5 BASIC25.55■■□□□ 1.68
SLC6A18Q96N87 MARCKSL1-201ENST00000329421 1699 ntAPPRIS P1 TSL 1 (best) BASIC25.53■■□□□ 1.68
SLC6A18Q96N87 GGA1-204ENST00000381756 2107 ntTSL 1 (best) BASIC25.53■■□□□ 1.68
SLC6A18Q96N87 AC008813.1-201ENST00000536597 885 ntBASIC25.52■■□□□ 1.68
SLC6A18Q96N87 C16orf74-204ENST00000602719 1002 ntAPPRIS ALT2 TSL 3 BASIC25.52■■□□□ 1.68
SLC6A18Q96N87 RNF126P1-201ENST00000567452 1320 ntBASIC25.52■■□□□ 1.68
SLC6A18Q96N87 BAX-202ENST00000345358 793 ntAPPRIS P1 TSL 1 (best) BASIC25.51■■□□□ 1.67
SLC6A18Q96N87 LAGE3-201ENST00000357360 949 ntAPPRIS P1 TSL 1 (best) BASIC25.51■■□□□ 1.67
SLC6A18Q96N87 AGO3-204ENST00000397828 1035 ntTSL 2 BASIC25.51■■□□□ 1.67
SLC6A18Q96N87 ABHD17AP5-201ENST00000580133 923 ntBASIC25.51■■□□□ 1.67
SLC6A18Q96N87 TSPAN3-203ENST00000424443 1530 ntTSL 2 BASIC25.51■■□□□ 1.67
SLC6A18Q96N87 HOXD8-201ENST00000313173 1917 ntAPPRIS P3 TSL 2 BASIC25.5■■□□□ 1.67
SLC6A18Q96N87 KIF13A-207ENST00000502704 1330 ntTSL 1 (best) BASIC25.5■■□□□ 1.67
SLC6A18Q96N87 C1orf122-201ENST00000373042 973 ntAPPRIS P3 TSL 1 (best) BASIC25.49■■□□□ 1.67
SLC6A18Q96N87 RPARP-AS1-205ENST00000596045 431 ntTSL 3 BASIC25.49■■□□□ 1.67
SLC6A18Q96N87 MAF-201ENST00000326043 2646 ntAPPRIS P3 TSL 1 (best) BASIC25.49■■□□□ 1.67
SLC6A18Q96N87 SHC2-201ENST00000264554 2494 ntAPPRIS P1 TSL 1 (best) BASIC25.48■■□□□ 1.67
SLC6A18Q96N87 PCSK6-201ENST00000331826 2309 ntTSL 5 BASIC25.48■■□□□ 1.67
SLC6A18Q96N87 AC110285.7-201ENST00000624417 1536 ntBASIC25.48■■□□□ 1.67
SLC6A18Q96N87 PDF-201ENST00000288022 1158 ntAPPRIS P1 TSL 1 (best) BASIC25.48■■□□□ 1.67
SLC6A18Q96N87 IGFBPL1-201ENST00000377694 1093 ntAPPRIS P1 TSL 2 BASIC25.48■■□□□ 1.67
SLC6A18Q96N87 AC022413.1-201ENST00000624602 984 ntBASIC25.48■■□□□ 1.67
SLC6A18Q96N87 UBAC1-201ENST00000371756 1867 ntAPPRIS P1 TSL 1 (best) BASIC25.48■■□□□ 1.67
SLC6A18Q96N87 MKNK2-202ENST00000309340 1744 ntAPPRIS ALT2 TSL 1 (best) BASIC25.48■■□□□ 1.67
SLC6A18Q96N87 TMEM55B-202ENST00000398020 1696 ntAPPRIS ALT1 TSL 1 (best) BASIC25.48■■□□□ 1.67
SLC6A18Q96N87 LRRC10B-201ENST00000378075 2219 ntAPPRIS P1 BASIC25.48■■□□□ 1.67
SLC6A18Q96N87 MAPK8IP1P1-201ENST00000574657 1439 ntBASIC25.47■■□□□ 1.67
SLC6A18Q96N87 TAF10-201ENST00000299424 1215 ntAPPRIS P1 TSL 1 (best) BASIC25.47■■□□□ 1.67
SLC6A18Q96N87 RPRML-201ENST00000322329 1093 ntAPPRIS P1 BASIC25.47■■□□□ 1.67
SLC6A18Q96N87 CCDC160-202ENST00000517294 1790 ntAPPRIS P1 TSL 5 BASIC25.46■■□□□ 1.67
SLC6A18Q96N87 MDFIC-203ENST00000423503 474 ntTSL 1 (best) BASIC25.45■■□□□ 1.66
SLC6A18Q96N87 GADD45A-205ENST00000617962 1142 ntTSL 1 (best) BASIC25.45■■□□□ 1.66
SLC6A18Q96N87 COPZ2-210ENST00000621465 895 ntAPPRIS P1 TSL 1 (best) BASIC25.45■■□□□ 1.66
SLC6A18Q96N87 TNK2-201ENST00000333602 5270 ntAPPRIS P1 TSL 1 (best) BASIC25.45■■□□□ 1.66
SLC6A18Q96N87 MORF4L1-203ENST00000426013 1880 ntAPPRIS P1 TSL 1 (best) BASIC25.45■■□□□ 1.66
SLC6A18Q96N87 MAPK3-205ENST00000395202 1008 ntTSL 1 (best) BASIC25.44■■□□□ 1.66
SLC6A18Q96N87 C16orf95-206ENST00000618367 974 ntAPPRIS ALT2 TSL 2 BASIC25.44■■□□□ 1.66
SLC6A18Q96N87 SSTR4-201ENST00000255008 1427 ntAPPRIS P1 BASIC25.44■■□□□ 1.66
SLC6A18Q96N87 LSM7-201ENST00000252622 529 ntAPPRIS P1 TSL 1 (best) BASIC25.43■■□□□ 1.66
SLC6A18Q96N87 ELOC-207ENST00000522337 816 ntAPPRIS P1 TSL 2 BASIC25.43■■□□□ 1.66
SLC6A18Q96N87 EIF5A-202ENST00000336458 1511 ntAPPRIS P1 TSL 1 (best) BASIC25.42■■□□□ 1.66
SLC6A18Q96N87 ATPAF1-202ENST00000371937 1827 ntAPPRIS P1 TSL 1 (best) BASIC25.42■■□□□ 1.66
SLC6A18Q96N87 CHST11-203ENST00000547956 936 ntTSL 2 BASIC25.42■■□□□ 1.66
SLC6A18Q96N87 TMEM114-202ENST00000568335 899 ntTSL 3 BASIC25.42■■□□□ 1.66
SLC6A18Q96N87 TSR3-201ENST00000007390 1243 ntAPPRIS P1 TSL 1 (best) BASIC25.42■■□□□ 1.66
SLC6A18Q96N87 AC078883.1-202ENST00000450443 1397 ntTSL 3 BASIC25.42■■□□□ 1.66
SLC6A18Q96N87 GXYLT1-201ENST00000280876 1937 ntAPPRIS ALT2 TSL 1 (best) BASIC25.41■■□□□ 1.66
SLC6A18Q96N87 RUNX2-205ENST00000465038 1770 ntAPPRIS P4 TSL 5 BASIC25.41■■□□□ 1.66
SLC6A18Q96N87 SH3GL3-202ENST00000427482 1806 ntAPPRIS P1 TSL 1 (best) BASIC25.41■■□□□ 1.66
SLC6A18Q96N87 RASSF8-202ENST00000381352 2320 ntTSL 1 (best) BASIC25.4■■□□□ 1.66
SLC6A18Q96N87 NRXN1-228ENST00000628364 2444 ntTSL 5 BASIC25.39■■□□□ 1.66
SLC6A18Q96N87 NKX2-1-204ENST00000522719 1417 ntAPPRIS P1 TSL 1 (best) BASIC25.39■■□□□ 1.66
SLC6A18Q96N87 ZNF470-206ENST00000601902 1640 ntTSL 1 (best) BASIC25.39■■□□□ 1.66
SLC6A18Q96N87 MDFIC-208ENST00000614186 1068 ntTSL 1 (best) BASIC25.39■■□□□ 1.66
SLC6A18Q96N87 C9orf50-201ENST00000372478 1620 ntAPPRIS P2 TSL 2 BASIC25.38■■□□□ 1.65
SLC6A18Q96N87 HOMER3-202ENST00000392351 1557 ntAPPRIS P3 TSL 1 (best) BASIC25.37■■□□□ 1.65
SLC6A18Q96N87 RAD51-210ENST00000557850 1397 ntTSL 2 BASIC25.37■■□□□ 1.65
SLC6A18Q96N87 KLHL21-203ENST00000463043 667 ntTSL 5 BASIC25.37■■□□□ 1.65
Retrieved 100 of 98,524 protein–RNA pairs in 17.6 ms