Protein–RNA interactions for Protein: Q96FT9

IFT43, Intraflagellar transport protein 43 homolog, humanhuman

Predictions only

Length 208 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
IFT43Q96FT9 TPRA1-209ENST00000489960 1903 ntAPPRIS P1 TSL 5 BASIC26.24■■□□□ 1.79
IFT43Q96FT9 AC187653.1-201ENST00000506382 702 ntAPPRIS P1 TSL 5 BASIC26.24■■□□□ 1.79
IFT43Q96FT9 AL451007.3-201ENST00000640271 588 ntAPPRIS P1 BASIC26.24■■□□□ 1.79
IFT43Q96FT9 AL139393.2-201ENST00000608721 2025 ntBASIC26.24■■□□□ 1.79
IFT43Q96FT9 DNLZ-201ENST00000371738 724 ntAPPRIS P1 TSL 1 (best) BASIC26.23■■□□□ 1.79
IFT43Q96FT9 RTN4R-201ENST00000043402 2157 ntAPPRIS P2 TSL 1 (best) BASIC26.22■■□□□ 1.79
IFT43Q96FT9 BARX1-201ENST00000253968 1533 ntAPPRIS P1 TSL 1 (best) BASIC26.22■■□□□ 1.79
IFT43Q96FT9 CTBP1-201ENST00000290921 2297 ntTSL 1 (best) BASIC26.22■■□□□ 1.79
IFT43Q96FT9 AC116407.1-201ENST00000398832 1599 ntTSL 2 BASIC26.21■■□□□ 1.79
IFT43Q96FT9 DDN-AS1-203ENST00000552284 934 ntTSL 3 BASIC26.21■■□□□ 1.79
IFT43Q96FT9 COQ2-202ENST00000311469 1641 ntAPPRIS P2 TSL 1 (best) BASIC26.21■■□□□ 1.79
IFT43Q96FT9 C14orf80-202ENST00000334656 1358 ntAPPRIS ALT2 TSL 2 BASIC26.2■■□□□ 1.79
IFT43Q96FT9 MORF4L1-203ENST00000426013 1880 ntAPPRIS P1 TSL 1 (best) BASIC26.2■■□□□ 1.78
IFT43Q96FT9 MACF1-219ENST00000484793 834 ntTSL 2 BASIC26.2■■□□□ 1.78
IFT43Q96FT9 VWA1-201ENST00000338660 2147 ntTSL 2 BASIC26.2■■□□□ 1.78
IFT43Q96FT9 SOX1-201ENST00000330949 2842 ntAPPRIS P1 BASIC26.2■■□□□ 1.78
IFT43Q96FT9 CAPNS1-211ENST00000590874 926 ntTSL 5 BASIC26.19■■□□□ 1.78
IFT43Q96FT9 EI24-212ENST00000615917 1407 ntTSL 2 BASIC26.18■■□□□ 1.78
IFT43Q96FT9 CERS2-205ENST00000368954 2505 ntAPPRIS P1 TSL 1 (best) BASIC26.18■■□□□ 1.78
IFT43Q96FT9 SLC30A10-202ENST00000366926 1915 ntAPPRIS P1 TSL 1 (best) BASIC26.18■■□□□ 1.78
IFT43Q96FT9 C1QTNF8-201ENST00000328449 1627 ntAPPRIS P1 TSL 5 BASIC26.17■■□□□ 1.78
IFT43Q96FT9 CCDC160-202ENST00000517294 1790 ntAPPRIS P1 TSL 5 BASIC26.17■■□□□ 1.78
IFT43Q96FT9 SECTM1-201ENST00000269389 2235 ntAPPRIS P2 TSL 1 (best) BASIC26.16■■□□□ 1.78
IFT43Q96FT9 MAGI2-211ENST00000535697 6146 ntTSL 5 BASIC26.15■■□□□ 1.78
IFT43Q96FT9 ACOT12-204ENST00000513751 612 ntTSL 1 (best) BASIC26.15■■□□□ 1.78
IFT43Q96FT9 SPATA5L1-208ENST00000638607 1863 ntTSL 2 BASIC26.15■■□□□ 1.78
IFT43Q96FT9 ZFAND2B-208ENST00000409594 2021 ntTSL 2 BASIC26.14■■□□□ 1.78
IFT43Q96FT9 TNFRSF25-204ENST00000356876 1625 ntAPPRIS ALT2 TSL 1 (best) BASIC26.14■■□□□ 1.77
IFT43Q96FT9 MTCH1-202ENST00000373627 2057 ntAPPRIS P1 TSL 1 (best) BASIC26.13■■□□□ 1.77
IFT43Q96FT9 AC004837.3-201ENST00000420748 565 ntTSL 4 BASIC26.13■■□□□ 1.77
IFT43Q96FT9 PDPK1-203ENST00000389224 2416 ntTSL 2 BASIC26.13■■□□□ 1.77
IFT43Q96FT9 SLC16A11-201ENST00000308009 1803 ntAPPRIS P2 TSL 1 (best) BASIC26.12■■□□□ 1.77
IFT43Q96FT9 RRNAD1-201ENST00000368216 2254 ntAPPRIS P3 TSL 1 (best) BASIC26.12■■□□□ 1.77
IFT43Q96FT9 PLEKHJ1-201ENST00000326631 1206 ntAPPRIS P1 TSL 1 (best) BASIC26.11■■□□□ 1.77
IFT43Q96FT9 NPC2-207ENST00000555619 1035 ntAPPRIS P2 TSL 1 (best) BASIC26.11■■□□□ 1.77
IFT43Q96FT9 LINC01971-201ENST00000617888 1048 ntBASIC26.11■■□□□ 1.77
IFT43Q96FT9 PQLC1-203ENST00000397778 2555 ntAPPRIS P3 TSL 1 (best) BASIC26.11■■□□□ 1.77
IFT43Q96FT9 COL13A1-214ENST00000522165 2061 ntAPPRIS ALT2 TSL 5 BASIC26.11■■□□□ 1.77
IFT43Q96FT9 PRELID2-207ENST00000511435 1894 ntAPPRIS ALT1 TSL 2 BASIC26.11■■□□□ 1.77
IFT43Q96FT9 HDGF-210ENST00000537739 2073 ntAPPRIS P1 TSL 1 (best) BASIC26.1■■□□□ 1.77
IFT43Q96FT9 MRPL9-201ENST00000368829 882 ntAPPRIS ALT2 TSL 2 BASIC26.1■■□□□ 1.77
IFT43Q96FT9 AL589765.4-201ENST00000512280 382 ntTSL 3 BASIC26.1■■□□□ 1.77
IFT43Q96FT9 UBAC1-201ENST00000371756 1867 ntAPPRIS P1 TSL 1 (best) BASIC26.1■■□□□ 1.77
IFT43Q96FT9 AP004833.2-201ENST00000532228 1454 ntBASIC26.09■■□□□ 1.77
IFT43Q96FT9 FAM189B-210ENST00000621094 1335 ntTSL 1 (best) BASIC26.09■■□□□ 1.77
IFT43Q96FT9 SMDT1-201ENST00000331479 1567 ntAPPRIS P1 TSL 1 (best) BASIC26.08■■□□□ 1.77
IFT43Q96FT9 MIR639-201ENST00000384974 98 ntBASIC26.08■■□□□ 1.77
IFT43Q96FT9 PRSS41-201ENST00000399677 1127 ntAPPRIS P1 TSL 5 BASIC26.08■■□□□ 1.77
IFT43Q96FT9 AGPS-202ENST00000409888 815 ntTSL 4 BASIC26.08■■□□□ 1.77
IFT43Q96FT9 ARHGAP22-202ENST00000374170 2107 ntTSL 5 BASIC26.07■■□□□ 1.76
IFT43Q96FT9 RNF166-209ENST00000567844 633 ntTSL 5 BASIC26.07■■□□□ 1.76
IFT43Q96FT9 U2AF1L5-201ENST00000610664 897 ntAPPRIS P5 TSL 1 (best) BASIC26.06■■□□□ 1.76
IFT43Q96FT9 VEGFA-226ENST00000611736 1239 ntTSL 1 (best) BASIC26.06■■□□□ 1.76
IFT43Q96FT9 ARMC10-205ENST00000428183 2445 ntTSL 1 (best) BASIC26.06■■□□□ 1.76
IFT43Q96FT9 GKAP1-202ENST00000376365 1511 ntTSL 1 (best) BASIC26.05■■□□□ 1.76
IFT43Q96FT9 TCAM1P-201ENST00000463377 452 ntTSL 3 BASIC26.05■■□□□ 1.76
IFT43Q96FT9 MIR4449-201ENST00000578365 66 ntBASIC26.05■■□□□ 1.76
IFT43Q96FT9 CLEC3B-202ENST00000428034 752 ntTSL 2 BASIC26.04■■□□□ 1.76
IFT43Q96FT9 TRIM52-AS1-203ENST00000509252 529 ntTSL 3 BASIC26.04■■□□□ 1.76
IFT43Q96FT9 MIR3648-2-201ENST00000581792 180 ntBASIC26.04■■□□□ 1.76
IFT43Q96FT9 DUX4L11-201ENST00000611504 1267 ntBASIC26.04■■□□□ 1.76
IFT43Q96FT9 DUX4L12-201ENST00000614593 1267 ntBASIC26.04■■□□□ 1.76
IFT43Q96FT9 MIR3648-1-201ENST00000615959 180 ntBASIC26.04■■□□□ 1.76
IFT43Q96FT9 DUX4L14-201ENST00000621227 1267 ntBASIC26.04■■□□□ 1.76
IFT43Q96FT9 QDPR-201ENST00000281243 1648 ntAPPRIS P1 TSL 1 (best) BASIC26.03■■□□□ 1.76
IFT43Q96FT9 SPIRE1-203ENST00000410092 5533 ntAPPRIS P3 TSL 1 (best) BASIC26.03■■□□□ 1.76
IFT43Q96FT9 RPS2-202ENST00000526522 924 ntTSL 2 BASIC26.03■■□□□ 1.76
IFT43Q96FT9 JMJD8-202ENST00000562111 823 ntTSL 2 BASIC26.03■■□□□ 1.76
IFT43Q96FT9 TCFL5-201ENST00000217162 2453 ntAPPRIS ALT2 TSL 1 (best) BASIC26.03■■□□□ 1.76
IFT43Q96FT9 TCFL5-202ENST00000335351 2456 ntAPPRIS P2 TSL 1 (best) BASIC26.03■■□□□ 1.76
IFT43Q96FT9 SHARPIN-202ENST00000398712 1765 ntAPPRIS P1 TSL 1 (best) BASIC26.02■■□□□ 1.76
IFT43Q96FT9 F8A3-201ENST00000622749 1759 ntAPPRIS P1 BASIC26.02■■□□□ 1.76
IFT43Q96FT9 ADAP1-201ENST00000265846 2363 ntAPPRIS P1 TSL 1 (best) BASIC26.02■■□□□ 1.76
IFT43Q96FT9 PLSCR3-202ENST00000535512 2067 ntAPPRIS P1 TSL 1 (best) BASIC26.01■■□□□ 1.75
IFT43Q96FT9 LINC00273-201ENST00000539813 1452 ntBASIC26.01■■□□□ 1.75
IFT43Q96FT9 PPP1CC-208ENST00000551676 1581 ntTSL 2 BASIC26.01■■□□□ 1.75
IFT43Q96FT9 AC135731.1-201ENST00000569415 2548 ntBASIC26.01■■□□□ 1.75
IFT43Q96FT9 PLSCR3-214ENST00000619711 2066 ntTSL 5 BASIC26.01■■□□□ 1.75
IFT43Q96FT9 GDI1-215ENST00000630693 786 ntTSL 4 BASIC26.01■■□□□ 1.75
IFT43Q96FT9 DPF1-202ENST00000412732 2303 ntTSL 1 (best) BASIC26■■□□□ 1.75
IFT43Q96FT9 FEV-201ENST00000295727 1879 ntAPPRIS P1 TSL 1 (best) BASIC26■■□□□ 1.75
IFT43Q96FT9 HSD11B1L-202ENST00000339423 1660 ntAPPRIS P3 TSL 1 (best) BASIC26■■□□□ 1.75
IFT43Q96FT9 AURKAIP1-203ENST00000338370 1072 ntAPPRIS P1 TSL 1 (best) BASIC26■■□□□ 1.75
IFT43Q96FT9 PHF20L1-207ENST00000395379 1998 ntTSL 5 BASIC26■■□□□ 1.75
IFT43Q96FT9 TMEM9-201ENST00000367330 1959 ntAPPRIS P3 TSL 1 (best) BASIC25.99■■□□□ 1.75
IFT43Q96FT9 HSD17B1-201ENST00000225929 1265 ntAPPRIS ALT2 TSL 2 BASIC25.98■■□□□ 1.75
IFT43Q96FT9 RPS2-201ENST00000343262 985 ntAPPRIS P1 TSL 1 (best) BASIC25.98■■□□□ 1.75
IFT43Q96FT9 DNPEP-201ENST00000273075 2425 ntAPPRIS P3 TSL 1 (best) BASIC25.97■■□□□ 1.75
IFT43Q96FT9 C16orf59-202ENST00000483320 1709 ntAPPRIS ALT2 TSL 2 BASIC25.97■■□□□ 1.75
IFT43Q96FT9 SLC35D2-201ENST00000253270 1613 ntAPPRIS P1 TSL 1 (best) BASIC25.97■■□□□ 1.75
IFT43Q96FT9 AC135983.2-203ENST00000454486 1613 ntBASIC25.97■■□□□ 1.75
IFT43Q96FT9 AL118558.1-203ENST00000553701 447 ntTSL 3 BASIC25.97■■□□□ 1.75
IFT43Q96FT9 CALM3-209ENST00000597743 577 ntTSL 4 BASIC25.97■■□□□ 1.75
IFT43Q96FT9 AC016575.1-201ENST00000607026 382 ntBASIC25.97■■□□□ 1.75
IFT43Q96FT9 INPP4A-203ENST00000409463 1565 ntTSL 1 (best) BASIC25.97■■□□□ 1.75
IFT43Q96FT9 ITPKA-201ENST00000260386 1824 ntAPPRIS P1 TSL 1 (best) BASIC25.97■■□□□ 1.75
IFT43Q96FT9 TESK1-201ENST00000336395 2421 ntAPPRIS P1 TSL 1 (best) BASIC25.97■■□□□ 1.75
IFT43Q96FT9 CLK2-201ENST00000355560 2120 ntAPPRIS ALT1 TSL 5 BASIC25.96■■□□□ 1.75
IFT43Q96FT9 MAD2L2-207ENST00000376692 1118 ntAPPRIS P1 TSL 1 (best) BASIC25.96■■□□□ 1.75
IFT43Q96FT9 FKBP1A-210ENST00000614856 562 ntTSL 2 BASIC25.96■■□□□ 1.75
Retrieved 100 of 98,524 protein–RNA pairs in 9.9 ms