Protein–RNA interactions for Protein: Q96D59

RNF183, Probable E3 ubiquitin-protein ligase RNF183, humanhuman

Predictions only

Length 192 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RNF183Q96D59 RPS2-201ENST00000343262 985 ntAPPRIS P1 TSL 1 (best) BASIC18.84■□□□□ 0.61
RNF183Q96D59 ZIC2-201ENST00000376335 2983 ntAPPRIS P1 TSL 1 (best) BASIC18.84■□□□□ 0.61
RNF183Q96D59 YAP1-204ENST00000526343 2393 ntTSL 5 BASIC18.84■□□□□ 0.61
RNF183Q96D59 MBOAT7-202ENST00000338624 2076 ntTSL 2 BASIC18.83■□□□□ 0.61
RNF183Q96D59 GXYLT1-201ENST00000280876 1937 ntAPPRIS ALT2 TSL 1 (best) BASIC18.83■□□□□ 0.6
RNF183Q96D59 FSD1L-208ENST00000495708 1906 ntTSL 1 (best) BASIC18.83■□□□□ 0.6
RNF183Q96D59 FAAP20-202ENST00000378546 729 ntAPPRIS P1 TSL 1 (best) BASIC18.83■□□□□ 0.6
RNF183Q96D59 SH3GL3-202ENST00000427482 1806 ntAPPRIS P1 TSL 1 (best) BASIC18.83■□□□□ 0.6
RNF183Q96D59 MBD2-201ENST00000256429 5188 ntAPPRIS P1 TSL 1 (best) BASIC18.83■□□□□ 0.6
RNF183Q96D59 HNRNPAB-205ENST00000506259 1674 ntAPPRIS ALT2 TSL 1 (best) BASIC18.82■□□□□ 0.6
RNF183Q96D59 RUNX2-203ENST00000371436 1588 ntAPPRIS ALT2 TSL 5 BASIC18.82■□□□□ 0.6
RNF183Q96D59 ATPAF1-202ENST00000371937 1827 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
RNF183Q96D59 HES6-205ENST00000409356 528 ntTSL 2 BASIC18.82■□□□□ 0.6
RNF183Q96D59 AC231981.1-201ENST00000450917 974 ntTSL 3 BASIC18.82■□□□□ 0.6
RNF183Q96D59 CAAP1-205ENST00000520187 773 ntTSL 5 BASIC18.82■□□□□ 0.6
RNF183Q96D59 CFAP73-201ENST00000335621 1514 ntAPPRIS P1 TSL 5 BASIC18.82■□□□□ 0.6
RNF183Q96D59 FOXA2-202ENST00000419308 2422 ntAPPRIS ALT2 TSL 1 (best) BASIC18.82■□□□□ 0.6
RNF183Q96D59 MKNK2-202ENST00000309340 1744 ntAPPRIS ALT2 TSL 1 (best) BASIC18.8■□□□□ 0.6
RNF183Q96D59 TMEM158-201ENST00000503771 1813 ntAPPRIS P1 BASIC18.8■□□□□ 0.6
RNF183Q96D59 C16orf95-205ENST00000567970 1031 ntAPPRIS ALT2 TSL 5 BASIC18.8■□□□□ 0.6
RNF183Q96D59 ANGPTL6-201ENST00000253109 1900 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
RNF183Q96D59 NGB-201ENST00000298352 1884 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
RNF183Q96D59 NREP-216ENST00000508870 540 ntAPPRIS P1 TSL 4 BASIC18.78■□□□□ 0.6
RNF183Q96D59 AGAP3-216ENST00000479901 1881 ntTSL 5 BASIC18.77■□□□□ 0.6
RNF183Q96D59 ADAT3-201ENST00000329478 1620 ntAPPRIS P1 TSL 1 (best) BASIC18.77■□□□□ 0.6
RNF183Q96D59 CAPN10-208ENST00000404753 2570 ntAPPRIS ALT2 TSL 5 BASIC18.77■□□□□ 0.59
RNF183Q96D59 ANKRD16-201ENST00000191063 1567 ntTSL 3 BASIC18.76■□□□□ 0.59
RNF183Q96D59 SLC12A2-202ENST00000343225 5509 ntAPPRIS ALT2 TSL 1 (best) BASIC18.76■□□□□ 0.59
RNF183Q96D59 CENPV-201ENST00000299736 1165 ntAPPRIS P1 TSL 1 (best) BASIC18.76■□□□□ 0.59
RNF183Q96D59 NPC2-207ENST00000555619 1035 ntAPPRIS P2 TSL 1 (best) BASIC18.76■□□□□ 0.59
RNF183Q96D59 CUEDC1-201ENST00000360238 2193 ntAPPRIS P1 TSL 2 BASIC18.76■□□□□ 0.59
RNF183Q96D59 MEX3D-201ENST00000402693 2850 ntAPPRIS P2 TSL 1 (best) BASIC18.75■□□□□ 0.59
RNF183Q96D59 FTCD-204ENST00000397748 1955 ntTSL 1 (best) BASIC18.75■□□□□ 0.59
RNF183Q96D59 CTXN1-201ENST00000318978 1274 ntAPPRIS P1 TSL 1 (best) BASIC18.75■□□□□ 0.59
RNF183Q96D59 VEGFA-208ENST00000417285 1081 ntAPPRIS ALT2 TSL 1 (best) BASIC18.75■□□□□ 0.59
RNF183Q96D59 STARD10-220ENST00000545082 1085 ntTSL 3 BASIC18.75■□□□□ 0.59
RNF183Q96D59 CHST11-202ENST00000546689 756 ntTSL 2 BASIC18.75■□□□□ 0.59
RNF183Q96D59 METRNL-202ENST00000570778 967 ntTSL 5 BASIC18.75■□□□□ 0.59
RNF183Q96D59 HNRNPAB-202ENST00000358344 1796 ntAPPRIS P4 TSL 1 (best) BASIC18.75■□□□□ 0.59
RNF183Q96D59 RTN2-202ENST00000344680 2063 ntAPPRIS P1 TSL 1 (best) BASIC18.75■□□□□ 0.59
RNF183Q96D59 C2orf88-204ENST00000409870 1441 ntAPPRIS P1 TSL 2 BASIC18.74■□□□□ 0.59
RNF183Q96D59 C1QTNF8-201ENST00000328449 1627 ntAPPRIS P1 TSL 5 BASIC18.74■□□□□ 0.59
RNF183Q96D59 AC135983.2-203ENST00000454486 1613 ntBASIC18.74■□□□□ 0.59
RNF183Q96D59 HECA-201ENST00000367658 5614 ntAPPRIS P1 TSL 1 (best) BASIC18.74■□□□□ 0.59
RNF183Q96D59 NREP-202ENST00000379671 2581 ntAPPRIS P1 TSL 1 (best) BASIC18.74■□□□□ 0.59
RNF183Q96D59 LDB1-202ENST00000425280 2089 ntTSL 5 BASIC18.74■□□□□ 0.59
RNF183Q96D59 RUNX2-205ENST00000465038 1770 ntAPPRIS P4 TSL 5 BASIC18.74■□□□□ 0.59
RNF183Q96D59 ATP8B2-201ENST00000368487 1523 ntTSL 1 (best) BASIC18.73■□□□□ 0.59
RNF183Q96D59 ANKRD13D-211ENST00000511455 2139 ntAPPRIS P1 TSL 1 (best) BASIC18.73■□□□□ 0.59
RNF183Q96D59 ABCB10P3-201ENST00000561950 2166 ntBASIC18.72■□□□□ 0.59
RNF183Q96D59 RP9-201ENST00000297157 1121 ntAPPRIS P2 TSL 1 (best) BASIC18.72■□□□□ 0.59
RNF183Q96D59 MAGI2-211ENST00000535697 6146 ntTSL 5 BASIC18.72■□□□□ 0.59
RNF183Q96D59 ARL6IP4-211ENST00000454885 1318 ntAPPRIS ALT2 TSL 1 (best) BASIC18.72■□□□□ 0.59
RNF183Q96D59 DTNBP1-212ENST00000622898 1305 ntTSL 1 (best) BASIC18.72■□□□□ 0.59
RNF183Q96D59 C16orf59-202ENST00000483320 1709 ntAPPRIS ALT2 TSL 2 BASIC18.71■□□□□ 0.59
RNF183Q96D59 SENP3-201ENST00000321337 2611 ntAPPRIS P1 TSL 1 (best) BASIC18.71■□□□□ 0.59
RNF183Q96D59 SLC52A2-201ENST00000329994 1896 ntAPPRIS P1 TSL 1 (best) BASIC18.71■□□□□ 0.59
RNF183Q96D59 BIN1-204ENST00000348750 2074 ntTSL 1 (best) BASIC18.71■□□□□ 0.59
RNF183Q96D59 CLDND1-226ENST00000513287 999 ntAPPRIS P1 TSL 2 BASIC18.71■□□□□ 0.59
RNF183Q96D59 R3HDM4-208ENST00000626716 138 ntTSL 5 BASIC18.71■□□□□ 0.59
RNF183Q96D59 AC092902.2-221ENST00000628476 965 ntTSL 5 BASIC18.71■□□□□ 0.59
RNF183Q96D59 RNF130-205ENST00000521389 2263 ntAPPRIS P1 TSL 1 (best) BASIC18.71■□□□□ 0.59
RNF183Q96D59 WHAMMP2-203ENST00000563942 1603 ntBASIC18.71■□□□□ 0.58
RNF183Q96D59 RDX-210ENST00000530301 1549 ntTSL 1 (best) BASIC18.7■□□□□ 0.58
RNF183Q96D59 GAL3ST1-205ENST00000406361 1819 ntAPPRIS P1 TSL 2 BASIC18.7■□□□□ 0.58
RNF183Q96D59 ZBTB10-204ENST00000455036 5458 ntAPPRIS P3 TSL 2 BASIC18.7■□□□□ 0.58
RNF183Q96D59 UBAC1-201ENST00000371756 1867 ntAPPRIS P1 TSL 1 (best) BASIC18.7■□□□□ 0.58
RNF183Q96D59 TMEM147-202ENST00000392204 935 ntTSL 2 BASIC18.7■□□□□ 0.58
RNF183Q96D59 FAM220A-206ENST00000616824 2211 ntTSL 1 (best) BASIC18.7■□□□□ 0.58
RNF183Q96D59 MORF4L1-203ENST00000426013 1880 ntAPPRIS P1 TSL 1 (best) BASIC18.69■□□□□ 0.58
RNF183Q96D59 ST7-AS1-201ENST00000456775 1889 ntBASIC18.69■□□□□ 0.58
RNF183Q96D59 SHOX2-204ENST00000483851 1866 ntAPPRIS ALT2 TSL 2 BASIC18.69■□□□□ 0.58
RNF183Q96D59 ARL8A-201ENST00000272217 1793 ntAPPRIS P1 TSL 1 (best) BASIC18.69■□□□□ 0.58
RNF183Q96D59 HSD11B1L-202ENST00000339423 1660 ntAPPRIS P3 TSL 1 (best) BASIC18.69■□□□□ 0.58
RNF183Q96D59 RTN2-201ENST00000245923 2293 ntTSL 1 (best) BASIC18.69■□□□□ 0.58
RNF183Q96D59 GRPEL2-204ENST00000513661 546 ntTSL 2 BASIC18.68■□□□□ 0.58
RNF183Q96D59 TPRA1-202ENST00000355552 1933 ntAPPRIS P1 TSL 1 (best) BASIC18.68■□□□□ 0.58
RNF183Q96D59 BCL7C-201ENST00000215115 1740 ntAPPRIS P1 TSL 1 (best) BASIC18.68■□□□□ 0.58
RNF183Q96D59 ARHGEF7-206ENST00000375741 5525 ntTSL 1 (best) BASIC18.67■□□□□ 0.58
RNF183Q96D59 ZNF787-203ENST00000610935 1925 ntAPPRIS P1 TSL 1 (best) BASIC18.67■□□□□ 0.58
RNF183Q96D59 MARCKSL1-201ENST00000329421 1699 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
RNF183Q96D59 NKX2-1-204ENST00000522719 1417 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
RNF183Q96D59 ARPC5L-202ENST00000353214 2507 ntAPPRIS P1 TSL 2 BASIC18.66■□□□□ 0.58
RNF183Q96D59 ARMC10-205ENST00000428183 2445 ntTSL 1 (best) BASIC18.66■□□□□ 0.58
RNF183Q96D59 ABCB10P1-201ENST00000614297 2181 ntBASIC18.66■□□□□ 0.58
RNF183Q96D59 CCZ1B-215ENST00000626257 2211 ntTSL 2 BASIC18.65■□□□□ 0.58
RNF183Q96D59 EXOC3L4-201ENST00000380069 2293 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
RNF183Q96D59 GSX2-202ENST00000503800 1181 ntTSL 5 BASIC18.65■□□□□ 0.58
RNF183Q96D59 MAPK8IP1P1-201ENST00000574657 1439 ntBASIC18.65■□□□□ 0.58
RNF183Q96D59 TSPAN33-201ENST00000486685 1863 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
RNF183Q96D59 TESK1-206ENST00000620767 2438 ntAPPRIS P1 TSL 5 BASIC18.64■□□□□ 0.58
RNF183Q96D59 TM6SF1-202ENST00000322019 2074 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.57
RNF183Q96D59 CCDC160-202ENST00000517294 1790 ntAPPRIS P1 TSL 5 BASIC18.64■□□□□ 0.57
RNF183Q96D59 SURF1-201ENST00000371974 1093 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.57
RNF183Q96D59 TSPAN4-207ENST00000397411 1025 ntAPPRIS P1 TSL 2 BASIC18.64■□□□□ 0.57
RNF183Q96D59 SURF1-205ENST00000615505 991 ntTSL 1 (best) BASIC18.64■□□□□ 0.57
RNF183Q96D59 RHOQ-201ENST00000238738 2975 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.57
RNF183Q96D59 COL13A1-210ENST00000517713 2007 ntAPPRIS ALT2 TSL 5 BASIC18.64■□□□□ 0.57
RNF183Q96D59 RASSF8-202ENST00000381352 2320 ntTSL 1 (best) BASIC18.63■□□□□ 0.57
RNF183Q96D59 AMZ2-201ENST00000359783 1722 ntTSL 5 BASIC18.63■□□□□ 0.57
Retrieved 100 of 98,524 protein–RNA pairs in 9.7 ms