Protein–RNA interactions for Protein: Q96CG8

CTHRC1, Collagen triple helix repeat-containing protein 1, humanhuman

Predictions only

Length 243 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CTHRC1Q96CG8 SLC35D2-201ENST00000253270 1613 ntAPPRIS P1 TSL 1 (best) BASIC23.99■■□□□ 1.43
CTHRC1Q96CG8 LINC02323-201ENST00000559946 1603 ntTSL 3 BASIC23.99■■□□□ 1.43
CTHRC1Q96CG8 MYCL-202ENST00000372816 1688 ntAPPRIS P3 TSL 2 BASIC23.99■■□□□ 1.43
CTHRC1Q96CG8 U2AF1L5-201ENST00000610664 897 ntAPPRIS P5 TSL 1 (best) BASIC23.98■■□□□ 1.43
CTHRC1Q96CG8 TMEM251-202ENST00000415050 1303 ntTSL 2 BASIC23.98■■□□□ 1.43
CTHRC1Q96CG8 NKX2-1-204ENST00000522719 1417 ntAPPRIS P1 TSL 1 (best) BASIC23.98■■□□□ 1.43
CTHRC1Q96CG8 MKRN1-202ENST00000443720 1601 ntAPPRIS ALT2 TSL 1 (best) BASIC23.98■■□□□ 1.43
CTHRC1Q96CG8 RASL10A-202ENST00000401450 1720 ntTSL 2 BASIC23.98■■□□□ 1.43
CTHRC1Q96CG8 THAP11-201ENST00000303596 2114 ntAPPRIS P1 BASIC23.98■■□□□ 1.43
CTHRC1Q96CG8 GSC-201ENST00000238558 1264 ntAPPRIS P1 TSL 1 (best) BASIC23.97■■□□□ 1.43
CTHRC1Q96CG8 MPST-206ENST00000429360 1331 ntTSL 1 (best) BASIC23.97■■□□□ 1.43
CTHRC1Q96CG8 FKBP1A-205ENST00000439640 1583 ntTSL 3 BASIC23.97■■□□□ 1.43
CTHRC1Q96CG8 AC004540.2-201ENST00000451368 611 ntTSL 2 BASIC23.97■■□□□ 1.43
CTHRC1Q96CG8 ANKS1B-203ENST00000341752 2115 ntTSL 2 BASIC23.96■■□□□ 1.43
CTHRC1Q96CG8 ADAT3-201ENST00000329478 1620 ntAPPRIS P1 TSL 1 (best) BASIC23.96■■□□□ 1.43
CTHRC1Q96CG8 MRPL9-201ENST00000368829 882 ntAPPRIS ALT2 TSL 2 BASIC23.96■■□□□ 1.43
CTHRC1Q96CG8 AL589765.4-201ENST00000512280 382 ntTSL 3 BASIC23.96■■□□□ 1.43
CTHRC1Q96CG8 MEST-211ENST00000437945 1455 ntTSL 5 BASIC23.95■■□□□ 1.42
CTHRC1Q96CG8 MAZ-208ENST00000563402 1461 ntTSL 5 BASIC23.95■■□□□ 1.42
CTHRC1Q96CG8 MAZ-210ENST00000566906 1455 ntTSL 5 BASIC23.95■■□□□ 1.42
CTHRC1Q96CG8 PABPC1L2B-AS1-201ENST00000416989 1167 ntTSL 3 BASIC23.95■■□□□ 1.42
CTHRC1Q96CG8 AL662864.1-201ENST00000454388 1167 ntTSL 3 BASIC23.95■■□□□ 1.42
CTHRC1Q96CG8 ZNF706-207ENST00000519882 959 ntAPPRIS P1 TSL 3 BASIC23.95■■□□□ 1.42
CTHRC1Q96CG8 ZNF706-213ENST00000521272 732 ntAPPRIS P1 TSL 5 BASIC23.95■■□□□ 1.42
CTHRC1Q96CG8 SLC16A8-201ENST00000320521 1878 ntAPPRIS P1 TSL 1 (best) BASIC23.95■■□□□ 1.42
CTHRC1Q96CG8 MAZ-205ENST00000562337 1574 ntTSL 3 BASIC23.95■■□□□ 1.42
CTHRC1Q96CG8 PQLC1-203ENST00000397778 2555 ntAPPRIS P3 TSL 1 (best) BASIC23.95■■□□□ 1.42
CTHRC1Q96CG8 AC100797.4-201ENST00000631653 1827 ntBASIC23.94■■□□□ 1.42
CTHRC1Q96CG8 LSM14B-204ENST00000370915 1079 ntTSL 1 (best) BASIC23.94■■□□□ 1.42
CTHRC1Q96CG8 TNFRSF25-205ENST00000377782 1632 ntAPPRIS P4 TSL 1 (best) BASIC23.94■■□□□ 1.42
CTHRC1Q96CG8 CIB2-201ENST00000258930 1598 ntAPPRIS P1 TSL 1 (best) BASIC23.94■■□□□ 1.42
CTHRC1Q96CG8 AC116407.1-201ENST00000398832 1599 ntTSL 2 BASIC23.94■■□□□ 1.42
CTHRC1Q96CG8 SLC35A1-203ENST00000369557 1653 ntTSL 2 BASIC23.93■■□□□ 1.42
CTHRC1Q96CG8 MLEC-202ENST00000412616 841 ntTSL 3 BASIC23.93■■□□□ 1.42
CTHRC1Q96CG8 TRAM2-AS1-201ENST00000453216 664 ntTSL 3 BASIC23.93■■□□□ 1.42
CTHRC1Q96CG8 SDCCAG3-201ENST00000298537 2314 ntTSL 1 (best) BASIC23.93■■□□□ 1.42
CTHRC1Q96CG8 DRD5P2-201ENST00000421395 2012 ntBASIC23.93■■□□□ 1.42
CTHRC1Q96CG8 DERA-201ENST00000428559 1705 ntAPPRIS P1 TSL 1 (best) BASIC23.93■■□□□ 1.42
CTHRC1Q96CG8 ARHGDIG-201ENST00000219409 949 ntAPPRIS P1 TSL 1 (best) BASIC23.92■■□□□ 1.42
CTHRC1Q96CG8 ZFAND2B-206ENST00000409336 944 ntAPPRIS P1 TSL 5 BASIC23.92■■□□□ 1.42
CTHRC1Q96CG8 ZFAND2B-221ENST00000621130 1070 ntTSL 5 BASIC23.92■■□□□ 1.42
CTHRC1Q96CG8 COL13A1-213ENST00000520267 2276 ntAPPRIS ALT2 TSL 5 BASIC23.92■■□□□ 1.42
CTHRC1Q96CG8 RPUSD1-208ENST00000567114 1835 ntTSL 2 BASIC23.91■■□□□ 1.42
CTHRC1Q96CG8 GNAS-207ENST00000354359 1975 ntTSL 1 (best) BASIC23.91■■□□□ 1.42
CTHRC1Q96CG8 GNAS-210ENST00000371085 1972 ntTSL 1 (best) BASIC23.91■■□□□ 1.42
CTHRC1Q96CG8 COMMD7-201ENST00000278980 1900 ntAPPRIS P3 TSL 1 (best) BASIC23.9■■□□□ 1.42
CTHRC1Q96CG8 EFNA1-202ENST00000368407 1926 ntAPPRIS P1 TSL 1 (best) BASIC23.9■■□□□ 1.42
CTHRC1Q96CG8 GNAS-211ENST00000371095 1931 ntAPPRIS ALT1 TSL 1 (best) BASIC23.9■■□□□ 1.42
CTHRC1Q96CG8 WHRN-203ENST00000374057 1718 ntTSL 2 BASIC23.9■■□□□ 1.42
CTHRC1Q96CG8 ITGA9-203ENST00000422441 2282 ntTSL 1 (best) BASIC23.9■■□□□ 1.42
CTHRC1Q96CG8 TCAM1P-201ENST00000463377 452 ntTSL 3 BASIC23.9■■□□□ 1.42
CTHRC1Q96CG8 RALY-201ENST00000246194 1789 ntAPPRIS P4 TSL 1 (best) BASIC23.9■■□□□ 1.42
CTHRC1Q96CG8 LDLRAD4-218ENST00000592991 1640 ntTSL 1 (best) BASIC23.89■■□□□ 1.42
CTHRC1Q96CG8 HMCES-202ENST00000389735 1763 ntAPPRIS P1 TSL 1 (best) BASIC23.89■■□□□ 1.42
CTHRC1Q96CG8 HSPB11-201ENST00000194214 915 ntAPPRIS P1 TSL 1 (best) BASIC23.89■■□□□ 1.41
CTHRC1Q96CG8 ACTR3B-201ENST00000256001 2216 ntAPPRIS P1 TSL 1 (best) BASIC23.89■■□□□ 1.41
CTHRC1Q96CG8 MAPK8IP1P1-201ENST00000574657 1439 ntBASIC23.89■■□□□ 1.41
CTHRC1Q96CG8 WSB2-201ENST00000315436 2646 ntAPPRIS P1 TSL 1 (best) BASIC23.89■■□□□ 1.41
CTHRC1Q96CG8 FZD2-201ENST00000315323 2112 ntAPPRIS P1 BASIC23.89■■□□□ 1.41
CTHRC1Q96CG8 PLSCR3-209ENST00000574401 2032 ntAPPRIS P1 TSL 1 (best) BASIC23.88■■□□□ 1.41
CTHRC1Q96CG8 AC027237.3-202ENST00000558617 1778 ntTSL 2 BASIC23.88■■□□□ 1.41
CTHRC1Q96CG8 REPIN1-204ENST00000466559 1022 ntTSL 1 (best) BASIC23.87■■□□□ 1.41
CTHRC1Q96CG8 KANSL1L-207ENST00000452086 2334 ntTSL 1 (best) BASIC23.86■■□□□ 1.41
CTHRC1Q96CG8 AC096888.1-201ENST00000487097 565 ntTSL 4 BASIC23.86■■□□□ 1.41
CTHRC1Q96CG8 FTCD-201ENST00000291670 1905 ntAPPRIS P1 TSL 1 (best) BASIC23.86■■□□□ 1.41
CTHRC1Q96CG8 BMP8A-201ENST00000331593 1692 ntAPPRIS P1 TSL 1 (best) BASIC23.86■■□□□ 1.41
CTHRC1Q96CG8 LACTB-201ENST00000261893 1972 ntAPPRIS P1 TSL 1 (best) BASIC23.85■■□□□ 1.41
CTHRC1Q96CG8 CCNYL1-203ENST00000392209 1952 ntTSL 2 BASIC23.85■■□□□ 1.41
CTHRC1Q96CG8 C2orf88-204ENST00000409870 1441 ntAPPRIS P1 TSL 2 BASIC23.85■■□□□ 1.41
CTHRC1Q96CG8 EIF5A-202ENST00000336458 1511 ntAPPRIS P1 TSL 1 (best) BASIC23.85■■□□□ 1.41
CTHRC1Q96CG8 UBALD1-202ENST00000587615 799 ntTSL 2 BASIC23.85■■□□□ 1.41
CTHRC1Q96CG8 AP000251.1-201ENST00000433071 822 ntTSL 1 (best) BASIC23.84■■□□□ 1.41
CTHRC1Q96CG8 PROC-203ENST00000409048 1586 ntTSL 5 BASIC23.83■■□□□ 1.41
CTHRC1Q96CG8 MTCH1-201ENST00000373616 2006 ntTSL 1 (best) BASIC23.83■■□□□ 1.41
CTHRC1Q96CG8 DDN-AS1-203ENST00000552284 934 ntTSL 3 BASIC23.83■■□□□ 1.41
CTHRC1Q96CG8 AL451007.3-201ENST00000640271 588 ntAPPRIS P1 BASIC23.83■■□□□ 1.41
CTHRC1Q96CG8 GPR75-ASB3-201ENST00000406625 2113 ntAPPRIS P1 TSL 2 BASIC23.83■■□□□ 1.4
CTHRC1Q96CG8 SMARCD3-203ENST00000392811 2018 ntTSL 1 (best) BASIC23.83■■□□□ 1.4
CTHRC1Q96CG8 GSX2-202ENST00000503800 1181 ntTSL 5 BASIC23.82■■□□□ 1.4
CTHRC1Q96CG8 LINC01971-201ENST00000617888 1048 ntBASIC23.82■■□□□ 1.4
CTHRC1Q96CG8 ZDHHC23-206ENST00000498275 2055 ntAPPRIS ALT2 TSL 2 BASIC23.82■■□□□ 1.4
CTHRC1Q96CG8 ABHD17AP4-201ENST00000411545 909 ntBASIC23.81■■□□□ 1.4
CTHRC1Q96CG8 ZNRF2P2-203ENST00000454624 420 ntBASIC23.81■■□□□ 1.4
CTHRC1Q96CG8 TMEM9-201ENST00000367330 1959 ntAPPRIS P3 TSL 1 (best) BASIC23.81■■□□□ 1.4
CTHRC1Q96CG8 ZNF470-206ENST00000601902 1640 ntTSL 1 (best) BASIC23.81■■□□□ 1.4
CTHRC1Q96CG8 MXRA7-203ENST00000449428 1881 ntAPPRIS ALT2 TSL 1 (best) BASIC23.8■■□□□ 1.4
CTHRC1Q96CG8 AC231981.1-201ENST00000450917 974 ntTSL 3 BASIC23.8■■□□□ 1.4
CTHRC1Q96CG8 AC142086.6-201ENST00000621154 1765 ntBASIC23.8■■□□□ 1.4
CTHRC1Q96CG8 ZDHHC16-201ENST00000345745 1519 ntTSL 1 (best) BASIC23.79■■□□□ 1.4
CTHRC1Q96CG8 CDH23-208ENST00000461841 2000 ntTSL 5 BASIC23.79■■□□□ 1.4
CTHRC1Q96CG8 FEZ1-201ENST00000278919 1748 ntAPPRIS P1 TSL 1 (best) BASIC23.79■■□□□ 1.4
CTHRC1Q96CG8 NFYB-205ENST00000551727 1727 ntAPPRIS P1 TSL 3 BASIC23.79■■□□□ 1.4
CTHRC1Q96CG8 MNX1-201ENST00000252971 2174 ntAPPRIS P3 TSL 1 (best) BASIC23.78■■□□□ 1.4
CTHRC1Q96CG8 PCK2-202ENST00000396973 1830 ntTSL 1 (best) BASIC23.78■■□□□ 1.4
CTHRC1Q96CG8 FKBP1A-210ENST00000614856 562 ntTSL 2 BASIC23.78■■□□□ 1.4
CTHRC1Q96CG8 TNK2-201ENST00000333602 5270 ntAPPRIS P1 TSL 1 (best) BASIC23.78■■□□□ 1.4
CTHRC1Q96CG8 TSPOAP1-AS1-203ENST00000579527 2042 ntTSL 2 BASIC23.77■■□□□ 1.4
CTHRC1Q96CG8 FAM117A-201ENST00000240364 2365 ntAPPRIS P2 TSL 1 (best) BASIC23.77■■□□□ 1.4
CTHRC1Q96CG8 GSR-206ENST00000546342 1482 ntAPPRIS ALT2 TSL 1 (best) BASIC23.77■■□□□ 1.4
CTHRC1Q96CG8 AP002414.2-202ENST00000590929 1450 ntBASIC23.77■■□□□ 1.4
Retrieved 100 of 98,524 protein–RNA pairs in 10.8 ms