Protein–RNA interactions for Protein: Q96B33

CLDN23, Claudin-23, humanhuman

Predictions only

Length 292 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CLDN23Q96B33 CHST11-203ENST00000547956 936 ntTSL 2 BASIC26.29■■□□□ 1.8
CLDN23Q96B33 COPZ2-210ENST00000621465 895 ntAPPRIS P1 TSL 1 (best) BASIC26.29■■□□□ 1.8
CLDN23Q96B33 FSD1L-204ENST00000469022 1836 ntTSL 1 (best) BASIC26.29■■□□□ 1.8
CLDN23Q96B33 UCK1-201ENST00000372208 2063 ntTSL 1 (best) BASIC26.29■■□□□ 1.8
CLDN23Q96B33 CAPNS1-201ENST00000246533 1918 ntAPPRIS P2 TSL 1 (best) BASIC26.28■■□□□ 1.8
CLDN23Q96B33 PMS1-220ENST00000618056 1468 ntTSL 5 BASIC26.28■■□□□ 1.8
CLDN23Q96B33 MSRB2-201ENST00000376510 1803 ntAPPRIS P1 TSL 1 (best) BASIC26.28■■□□□ 1.8
CLDN23Q96B33 HYI-213ENST00000583037 1322 ntTSL 5 BASIC26.27■■□□□ 1.8
CLDN23Q96B33 CTSZ-201ENST00000217131 1495 ntAPPRIS P1 TSL 1 (best) BASIC26.27■■□□□ 1.8
CLDN23Q96B33 MLST8-203ENST00000397124 1691 ntAPPRIS P3 TSL 5 BASIC26.26■■□□□ 1.79
CLDN23Q96B33 COQ2-202ENST00000311469 1641 ntAPPRIS P2 TSL 1 (best) BASIC26.26■■□□□ 1.79
CLDN23Q96B33 CAPNS1-216ENST00000628306 1389 ntTSL 5 BASIC26.26■■□□□ 1.79
CLDN23Q96B33 GSX2-202ENST00000503800 1181 ntTSL 5 BASIC26.26■■□□□ 1.79
CLDN23Q96B33 AC060814.1-201ENST00000554326 538 ntBASIC26.26■■□□□ 1.79
CLDN23Q96B33 TSPAN3-203ENST00000424443 1530 ntTSL 2 BASIC26.25■■□□□ 1.79
CLDN23Q96B33 LAGE3-201ENST00000357360 949 ntAPPRIS P1 TSL 1 (best) BASIC26.25■■□□□ 1.79
CLDN23Q96B33 RASSF7-202ENST00000397583 1928 ntAPPRIS P3 TSL 1 (best) BASIC26.25■■□□□ 1.79
CLDN23Q96B33 ENKD1-201ENST00000243878 1579 ntAPPRIS P1 TSL 1 (best) BASIC26.24■■□□□ 1.79
CLDN23Q96B33 ATOH7-201ENST00000373673 1480 ntAPPRIS P1 BASIC26.23■■□□□ 1.79
CLDN23Q96B33 PELI3-203ENST00000524466 1671 ntTSL 1 (best) BASIC26.23■■□□□ 1.79
CLDN23Q96B33 QDPR-208ENST00000513615 1188 ntTSL 2 BASIC26.23■■□□□ 1.79
CLDN23Q96B33 PLEKHF2-202ENST00000519516 1144 ntAPPRIS P1 TSL 3 BASIC26.23■■□□□ 1.79
CLDN23Q96B33 AC148477.6-201ENST00000623746 465 ntBASIC26.23■■□□□ 1.79
CLDN23Q96B33 PI4KAP1-202ENST00000611748 1906 ntTSL 1 (best) BASIC26.23■■□□□ 1.79
CLDN23Q96B33 C20orf24-203ENST00000373852 1059 ntTSL 1 (best) BASIC26.22■■□□□ 1.79
CLDN23Q96B33 EIF5A-202ENST00000336458 1511 ntAPPRIS P1 TSL 1 (best) BASIC26.22■■□□□ 1.79
CLDN23Q96B33 AC135983.2-203ENST00000454486 1613 ntBASIC26.21■■□□□ 1.79
CLDN23Q96B33 FGF13-AS1-202ENST00000446383 584 ntTSL 3 BASIC26.2■■□□□ 1.78
CLDN23Q96B33 BCL7B-201ENST00000223368 1975 ntAPPRIS P1 TSL 1 (best) BASIC26.19■■□□□ 1.78
CLDN23Q96B33 LRRC61-202ENST00000359623 1877 ntAPPRIS P1 TSL 2 BASIC26.19■■□□□ 1.78
CLDN23Q96B33 WHAMMP2-203ENST00000563942 1603 ntBASIC26.18■■□□□ 1.78
CLDN23Q96B33 TSPY13P-201ENST00000338964 914 ntBASIC26.18■■□□□ 1.78
CLDN23Q96B33 YBX2-201ENST00000007699 1590 ntAPPRIS P1 TSL 1 (best) BASIC26.18■■□□□ 1.78
CLDN23Q96B33 TMEM55B-202ENST00000398020 1696 ntAPPRIS ALT1 TSL 1 (best) BASIC26.18■■□□□ 1.78
CLDN23Q96B33 ENDOG-201ENST00000372642 1172 ntAPPRIS P1 TSL 1 (best) BASIC26.17■■□□□ 1.78
CLDN23Q96B33 BTBD19-201ENST00000409335 1214 ntTSL 5 BASIC26.17■■□□□ 1.78
CLDN23Q96B33 LINC01770-201ENST00000417917 634 ntTSL 2 BASIC26.17■■□□□ 1.78
CLDN23Q96B33 GFER-205ENST00000569451 517 ntTSL 5 BASIC26.16■■□□□ 1.78
CLDN23Q96B33 HOXB3-210ENST00000489475 1845 ntTSL 2 BASIC26.16■■□□□ 1.78
CLDN23Q96B33 KRT18P60-201ENST00000312876 1297 ntBASIC26.15■■□□□ 1.78
CLDN23Q96B33 UPF3A-209ENST00000492270 494 ntTSL 2 BASIC26.15■■□□□ 1.78
CLDN23Q96B33 HOMER3-207ENST00000594794 903 ntTSL 5 BASIC26.15■■□□□ 1.78
CLDN23Q96B33 AC127502.1-201ENST00000399971 1502 ntBASIC26.14■■□□□ 1.78
CLDN23Q96B33 C9orf50-201ENST00000372478 1620 ntAPPRIS P2 TSL 2 BASIC26.14■■□□□ 1.78
CLDN23Q96B33 AC004987.1-201ENST00000428627 508 ntBASIC26.14■■□□□ 1.78
CLDN23Q96B33 TTC39C-209ENST00000584250 1048 ntTSL 1 (best) BASIC26.14■■□□□ 1.78
CLDN23Q96B33 KCTD15-206ENST00000588881 1211 ntAPPRIS P1 TSL 2 BASIC26.14■■□□□ 1.78
CLDN23Q96B33 AC092296.2-201ENST00000589470 999 ntBASIC26.14■■□□□ 1.78
CLDN23Q96B33 MTCP1-202ENST00000369476 2274 ntAPPRIS P1 TSL 3 BASIC26.13■■□□□ 1.77
CLDN23Q96B33 GPR137-202ENST00000377702 1478 ntTSL 1 (best) BASIC26.13■■□□□ 1.77
CLDN23Q96B33 ATP5G2P3-201ENST00000429083 425 ntBASIC26.13■■□□□ 1.77
CLDN23Q96B33 CCDC37-AS1-202ENST00000506660 986 ntTSL 1 (best) BASIC26.13■■□□□ 1.77
CLDN23Q96B33 C16orf59-202ENST00000483320 1709 ntAPPRIS ALT2 TSL 2 BASIC26.13■■□□□ 1.77
CLDN23Q96B33 LACTBL1-202ENST00000618559 1500 ntAPPRIS ALT2 TSL 5 BASIC26.13■■□□□ 1.77
CLDN23Q96B33 MARCKSL1-201ENST00000329421 1699 ntAPPRIS P1 TSL 1 (best) BASIC26.12■■□□□ 1.77
CLDN23Q96B33 OLFM2-201ENST00000264833 2019 ntAPPRIS P1 TSL 1 (best) BASIC26.12■■□□□ 1.77
CLDN23Q96B33 ZMYND19-201ENST00000298585 1375 ntAPPRIS P1 TSL 1 (best) BASIC26.12■■□□□ 1.77
CLDN23Q96B33 EPB41L4A-AS2-201ENST00000623705 1396 ntBASIC26.12■■□□□ 1.77
CLDN23Q96B33 TOMM40-201ENST00000252487 1707 ntAPPRIS P2 TSL 1 (best) BASIC26.12■■□□□ 1.77
CLDN23Q96B33 TOMM40-202ENST00000405636 1709 ntAPPRIS P2 TSL 1 (best) BASIC26.12■■□□□ 1.77
CLDN23Q96B33 MZT2B-201ENST00000281871 933 ntAPPRIS P3 TSL 1 (best) BASIC26.12■■□□□ 1.77
CLDN23Q96B33 MZT2A-201ENST00000309451 624 ntAPPRIS P1 TSL 1 (best) BASIC26.12■■□□□ 1.77
CLDN23Q96B33 KMT2E-AS1-201ENST00000453677 736 ntTSL 3 BASIC26.12■■□□□ 1.77
CLDN23Q96B33 AC110285.7-201ENST00000624417 1536 ntBASIC26.12■■□□□ 1.77
CLDN23Q96B33 GNAS-AS1_1.1-201ENST00000621898 103 ntBASIC26.11■■□□□ 1.77
CLDN23Q96B33 SAP25-204ENST00000622764 1031 ntAPPRIS ALT2 TSL 5 BASIC26.11■■□□□ 1.77
CLDN23Q96B33 GATA6-202ENST00000581694 2057 ntAPPRIS P1 TSL 1 (best) BASIC26.1■■□□□ 1.77
CLDN23Q96B33 MCCD1-201ENST00000376191 955 ntAPPRIS P1 TSL 1 (best) BASIC26.09■■□□□ 1.77
CLDN23Q96B33 RPS2-210ENST00000530225 765 ntTSL 2 BASIC26.09■■□□□ 1.77
CLDN23Q96B33 RAB4B-203ENST00000594800 1173 ntAPPRIS P1 TSL 5 BASIC26.09■■□□□ 1.77
CLDN23Q96B33 C1orf232-201ENST00000634842 643 ntAPPRIS P5 TSL 5 BASIC26.09■■□□□ 1.77
CLDN23Q96B33 PRRX2-201ENST00000372469 1311 ntAPPRIS P1 TSL 1 (best) BASIC26.09■■□□□ 1.77
CLDN23Q96B33 LSM6-202ENST00000502781 1352 ntAPPRIS P1 TSL 1 (best) BASIC26.08■■□□□ 1.77
CLDN23Q96B33 SSBP3-204ENST00000371320 2077 ntAPPRIS P3 TSL 1 (best) BASIC26.08■■□□□ 1.77
CLDN23Q96B33 NPC2-207ENST00000555619 1035 ntAPPRIS P2 TSL 1 (best) BASIC26.08■■□□□ 1.77
CLDN23Q96B33 TBX2-AS1-202ENST00000589814 539 ntTSL 3 BASIC26.08■■□□□ 1.77
CLDN23Q96B33 GUK1-208ENST00000366728 842 ntTSL 2 BASIC26.07■■□□□ 1.76
CLDN23Q96B33 ECEL1P2-201ENST00000461596 1295 ntBASIC26.07■■□□□ 1.76
CLDN23Q96B33 SLC9A3-AS1-207ENST00000607286 1357 ntTSL 5 BASIC26.07■■□□□ 1.76
CLDN23Q96B33 CDC34-201ENST00000215574 1471 ntAPPRIS P1 TSL 1 (best) BASIC26.06■■□□□ 1.76
CLDN23Q96B33 RARRES2P1-201ENST00000474487 481 ntBASIC26.06■■□□□ 1.76
CLDN23Q96B33 PLEKHJ1-204ENST00000586608 935 ntTSL 3 BASIC26.06■■□□□ 1.76
CLDN23Q96B33 OPRD1-202ENST00000621425 1217 ntTSL 1 (best) BASIC26.06■■□□□ 1.76
CLDN23Q96B33 CARS2-201ENST00000257347 1879 ntAPPRIS P1 TSL 1 (best) BASIC26.06■■□□□ 1.76
CLDN23Q96B33 GRK6-206ENST00000507633 1660 ntTSL 5 BASIC26.06■■□□□ 1.76
CLDN23Q96B33 MIR219A2-201ENST00000608502 1504 ntBASIC26.05■■□□□ 1.76
CLDN23Q96B33 GAL3ST3-203ENST00000527878 1599 ntAPPRIS P1 TSL 1 (best) BASIC26.05■■□□□ 1.76
CLDN23Q96B33 PPP1R14A-201ENST00000301242 777 ntAPPRIS P1 TSL 1 (best) BASIC26.05■■□□□ 1.76
CLDN23Q96B33 MAPK12-201ENST00000215659 1918 ntAPPRIS P1 TSL 1 (best) BASIC26.05■■□□□ 1.76
CLDN23Q96B33 HSD11B1L-202ENST00000339423 1660 ntAPPRIS P3 TSL 1 (best) BASIC26.05■■□□□ 1.76
CLDN23Q96B33 DSG2-202ENST00000585206 1081 ntTSL 2 BASIC26.04■■□□□ 1.76
CLDN23Q96B33 AQP1-203ENST00000409899 1009 ntTSL 1 (best) BASIC26.03■■□□□ 1.76
CLDN23Q96B33 FCGRT-217ENST00000599988 660 ntTSL 5 BASIC26.03■■□□□ 1.76
CLDN23Q96B33 AC107214.1-201ENST00000457303 559 ntTSL 1 (best) BASIC26.02■■□□□ 1.76
CLDN23Q96B33 HOMER3-202ENST00000392351 1557 ntAPPRIS P3 TSL 1 (best) BASIC26.02■■□□□ 1.76
CLDN23Q96B33 FOXD1-202ENST00000615637 2272 ntAPPRIS P1 BASIC26.01■■□□□ 1.75
CLDN23Q96B33 C19orf12-207ENST00000592153 1504 ntTSL 1 (best) BASIC26■■□□□ 1.75
CLDN23Q96B33 MAPK8IP1P1-201ENST00000574657 1439 ntBASIC26■■□□□ 1.75
CLDN23Q96B33 KLF16-204ENST00000617223 1133 ntAPPRIS P1 TSL 1 (best) BASIC26■■□□□ 1.75
CLDN23Q96B33 TMEM229A-201ENST00000455783 2108 ntAPPRIS P1 BASIC26■■□□□ 1.75
Retrieved 100 of 98,524 protein–RNA pairs in 15.4 ms