Protein–RNA interactions for Protein: Q8TE77

SSH3, Protein phosphatase Slingshot homolog 3, humanhuman

Predictions only

Length 659 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SSH3Q8TE77 TPRA1-202ENST00000355552 1933 ntAPPRIS P1 TSL 1 (best) BASIC32.04■■■□□ 2.72
SSH3Q8TE77 ARHGAP22-202ENST00000374170 2107 ntTSL 5 BASIC32.04■■■□□ 2.72
SSH3Q8TE77 PHF20L1-207ENST00000395379 1998 ntTSL 5 BASIC32.04■■■□□ 2.72
SSH3Q8TE77 ADAT3-201ENST00000329478 1620 ntAPPRIS P1 TSL 1 (best) BASIC32.04■■■□□ 2.72
SSH3Q8TE77 DDN-AS1-203ENST00000552284 934 ntTSL 3 BASIC32.03■■■□□ 2.72
SSH3Q8TE77 DNPEP-201ENST00000273075 2425 ntAPPRIS P3 TSL 1 (best) BASIC32.02■■■□□ 2.72
SSH3Q8TE77 INPP4A-203ENST00000409463 1565 ntTSL 1 (best) BASIC32.02■■■□□ 2.72
SSH3Q8TE77 AL451007.3-201ENST00000640271 588 ntAPPRIS P1 BASIC32.02■■■□□ 2.72
SSH3Q8TE77 TESK1-206ENST00000620767 2438 ntAPPRIS P1 TSL 5 BASIC32.02■■■□□ 2.72
SSH3Q8TE77 RASL10A-202ENST00000401450 1720 ntTSL 2 BASIC32.02■■■□□ 2.72
SSH3Q8TE77 MAZ-208ENST00000563402 1461 ntTSL 5 BASIC32.02■■■□□ 2.72
SSH3Q8TE77 MAZ-210ENST00000566906 1455 ntTSL 5 BASIC32.02■■■□□ 2.72
SSH3Q8TE77 FHL2-202ENST00000344213 1769 ntTSL 1 (best) BASIC32.01■■■□□ 2.71
SSH3Q8TE77 PDPK1-203ENST00000389224 2416 ntTSL 2 BASIC32■■■□□ 2.71
SSH3Q8TE77 NKX2-1-204ENST00000522719 1417 ntAPPRIS P1 TSL 1 (best) BASIC32■■■□□ 2.71
SSH3Q8TE77 CHST14-202ENST00000559991 1968 ntTSL 5 BASIC31.99■■■□□ 2.71
SSH3Q8TE77 SLC35D2-201ENST00000253270 1613 ntAPPRIS P1 TSL 1 (best) BASIC31.99■■■□□ 2.71
SSH3Q8TE77 MKRN1-202ENST00000443720 1601 ntAPPRIS ALT2 TSL 1 (best) BASIC31.99■■■□□ 2.71
SSH3Q8TE77 LINC01971-201ENST00000617888 1048 ntBASIC31.98■■■□□ 2.71
SSH3Q8TE77 AP000251.1-201ENST00000433071 822 ntTSL 1 (best) BASIC31.97■■■□□ 2.71
SSH3Q8TE77 SNX24-201ENST00000261369 2158 ntAPPRIS P1 TSL 1 (best) BASIC31.97■■■□□ 2.71
SSH3Q8TE77 SLC16A8-201ENST00000320521 1878 ntAPPRIS P1 TSL 1 (best) BASIC31.96■■■□□ 2.71
SSH3Q8TE77 HS3ST6-201ENST00000454677 1273 ntAPPRIS P1 TSL 1 (best) BASIC31.96■■■□□ 2.71
SSH3Q8TE77 MAZ-205ENST00000562337 1574 ntTSL 3 BASIC31.96■■■□□ 2.71
SSH3Q8TE77 F8A3-201ENST00000622749 1759 ntAPPRIS P1 BASIC31.96■■■□□ 2.71
SSH3Q8TE77 LAPTM4B-203ENST00000521545 915 ntAPPRIS P1 TSL 1 (best) BASIC31.95■■■□□ 2.71
SSH3Q8TE77 MEST-211ENST00000437945 1455 ntTSL 5 BASIC31.94■■■□□ 2.7
SSH3Q8TE77 FKBP1A-205ENST00000439640 1583 ntTSL 3 BASIC31.94■■■□□ 2.7
SSH3Q8TE77 C2orf88-204ENST00000409870 1441 ntAPPRIS P1 TSL 2 BASIC31.93■■■□□ 2.7
SSH3Q8TE77 MYCL-202ENST00000372816 1688 ntAPPRIS P3 TSL 2 BASIC31.93■■■□□ 2.7
SSH3Q8TE77 TPI1-201ENST00000229270 1763 ntTSL 1 (best) BASIC31.93■■■□□ 2.7
SSH3Q8TE77 AC100797.4-201ENST00000631653 1827 ntBASIC31.93■■■□□ 2.7
SSH3Q8TE77 CIB2-201ENST00000258930 1598 ntAPPRIS P1 TSL 1 (best) BASIC31.92■■■□□ 2.7
SSH3Q8TE77 ANKS1B-203ENST00000341752 2115 ntTSL 2 BASIC31.91■■■□□ 2.7
SSH3Q8TE77 AC231981.1-201ENST00000450917 974 ntTSL 3 BASIC31.91■■■□□ 2.7
SSH3Q8TE77 U2AF2-206ENST00000590551 1104 ntTSL 3 BASIC31.91■■■□□ 2.7
SSH3Q8TE77 MAPK8IP1P1-201ENST00000574657 1439 ntBASIC31.91■■■□□ 2.7
SSH3Q8TE77 FKBP1A-210ENST00000614856 562 ntTSL 2 BASIC31.9■■■□□ 2.7
SSH3Q8TE77 DPF1-202ENST00000412732 2303 ntTSL 1 (best) BASIC31.89■■■□□ 2.7
SSH3Q8TE77 FEV-201ENST00000295727 1879 ntAPPRIS P1 TSL 1 (best) BASIC31.89■■■□□ 2.7
SSH3Q8TE77 EFNA1-202ENST00000368407 1926 ntAPPRIS P1 TSL 1 (best) BASIC31.89■■■□□ 2.7
SSH3Q8TE77 NXNL1-201ENST00000301944 946 ntAPPRIS P1 TSL 1 (best) BASIC31.89■■■□□ 2.7
SSH3Q8TE77 RPUSD1-208ENST00000567114 1835 ntTSL 2 BASIC31.89■■■□□ 2.69
SSH3Q8TE77 GSX2-202ENST00000503800 1181 ntTSL 5 BASIC31.88■■■□□ 2.69
SSH3Q8TE77 RHOC-202ENST00000339083 1418 ntAPPRIS P1 TSL 1 (best) BASIC31.88■■■□□ 2.69
SSH3Q8TE77 LDLRAD4-218ENST00000592991 1640 ntTSL 1 (best) BASIC31.88■■■□□ 2.69
SSH3Q8TE77 AC027237.3-202ENST00000558617 1778 ntTSL 2 BASIC31.87■■■□□ 2.69
SSH3Q8TE77 DUX4L11-201ENST00000611504 1267 ntBASIC31.87■■■□□ 2.69
SSH3Q8TE77 DUX4L12-201ENST00000614593 1267 ntBASIC31.87■■■□□ 2.69
SSH3Q8TE77 DUX4L14-201ENST00000621227 1267 ntBASIC31.87■■■□□ 2.69
SSH3Q8TE77 CLK2-201ENST00000355560 2120 ntAPPRIS ALT1 TSL 5 BASIC31.87■■■□□ 2.69
SSH3Q8TE77 SHARPIN-202ENST00000398712 1765 ntAPPRIS P1 TSL 1 (best) BASIC31.86■■■□□ 2.69
SSH3Q8TE77 TNFSF12-201ENST00000293825 1553 ntAPPRIS P1 TSL 1 (best) BASIC31.86■■■□□ 2.69
SSH3Q8TE77 EIF5A-202ENST00000336458 1511 ntAPPRIS P1 TSL 1 (best) BASIC31.86■■■□□ 2.69
SSH3Q8TE77 TESK1-201ENST00000336395 2421 ntAPPRIS P1 TSL 1 (best) BASIC31.86■■■□□ 2.69
SSH3Q8TE77 SDCCAG3-201ENST00000298537 2314 ntTSL 1 (best) BASIC31.86■■■□□ 2.69
SSH3Q8TE77 RUNX2-203ENST00000371436 1588 ntAPPRIS ALT2 TSL 5 BASIC31.85■■■□□ 2.69
SSH3Q8TE77 ZDHHC16-201ENST00000345745 1519 ntTSL 1 (best) BASIC31.85■■■□□ 2.69
SSH3Q8TE77 MTMR1-214ENST00000542156 1227 ntTSL 1 (best) BASIC31.85■■■□□ 2.69
SSH3Q8TE77 C11orf95-204ENST00000546282 390 ntTSL 3 BASIC31.85■■■□□ 2.69
SSH3Q8TE77 TNFRSF25-205ENST00000377782 1632 ntAPPRIS P4 TSL 1 (best) BASIC31.85■■■□□ 2.69
SSH3Q8TE77 EXOC3L4-201ENST00000380069 2293 ntAPPRIS P1 TSL 1 (best) BASIC31.84■■■□□ 2.69
SSH3Q8TE77 PDCD2-209ENST00000542896 1082 ntTSL 2 BASIC31.84■■■□□ 2.69
SSH3Q8TE77 RALY-201ENST00000246194 1789 ntAPPRIS P4 TSL 1 (best) BASIC31.84■■■□□ 2.69
SSH3Q8TE77 MIR7108-201ENST00000614319 87 ntBASIC31.83■■■□□ 2.69
SSH3Q8TE77 ACTG1-210ENST00000575842 2256 ntAPPRIS P1 TSL 1 (best) BASIC31.83■■■□□ 2.69
SSH3Q8TE77 AC013394.1-201ENST00000629685 808 ntAPPRIS P1 TSL 5 BASIC31.82■■■□□ 2.68
SSH3Q8TE77 ZNF470-206ENST00000601902 1640 ntTSL 1 (best) BASIC31.82■■■□□ 2.68
SSH3Q8TE77 ADAP1-201ENST00000265846 2363 ntAPPRIS P1 TSL 1 (best) BASIC31.81■■■□□ 2.68
SSH3Q8TE77 DUX4L13-201ENST00000554103 1267 ntBASIC31.81■■■□□ 2.68
SSH3Q8TE77 DUX4L15-201ENST00000611059 1267 ntBASIC31.81■■■□□ 2.68
SSH3Q8TE77 DUX4L23-201ENST00000615195 1269 ntBASIC31.81■■■□□ 2.68
SSH3Q8TE77 DUX4L24-201ENST00000617576 1269 ntBASIC31.81■■■□□ 2.68
SSH3Q8TE77 DUX4L22-201ENST00000618238 1269 ntBASIC31.81■■■□□ 2.68
SSH3Q8TE77 DUX4L20-201ENST00000619712 1269 ntBASIC31.81■■■□□ 2.68
SSH3Q8TE77 DUX4L21-201ENST00000622058 1269 ntBASIC31.81■■■□□ 2.68
SSH3Q8TE77 DUX4L10-201ENST00000622460 1267 ntBASIC31.81■■■□□ 2.68
SSH3Q8TE77 DUX4L25-201ENST00000624915 1269 ntBASIC31.81■■■□□ 2.68
SSH3Q8TE77 CHML-204ENST00000638121 920 ntTSL 2 BASIC31.81■■■□□ 2.68
SSH3Q8TE77 DERA-201ENST00000428559 1705 ntAPPRIS P1 TSL 1 (best) BASIC31.8■■■□□ 2.68
SSH3Q8TE77 CCNYL1-203ENST00000392209 1952 ntTSL 2 BASIC31.8■■■□□ 2.68
SSH3Q8TE77 THAP11-201ENST00000303596 2114 ntAPPRIS P1 BASIC31.8■■■□□ 2.68
SSH3Q8TE77 ST6GALNAC6-203ENST00000373142 2448 ntTSL 1 (best) BASIC31.8■■■□□ 2.68
SSH3Q8TE77 SLC35A1-203ENST00000369557 1653 ntTSL 2 BASIC31.8■■■□□ 2.68
SSH3Q8TE77 GNAS-207ENST00000354359 1975 ntTSL 1 (best) BASIC31.79■■■□□ 2.68
SSH3Q8TE77 GNAS-210ENST00000371085 1972 ntTSL 1 (best) BASIC31.79■■■□□ 2.68
SSH3Q8TE77 FEZ1-201ENST00000278919 1748 ntAPPRIS P1 TSL 1 (best) BASIC31.79■■■□□ 2.68
SSH3Q8TE77 HMCES-202ENST00000389735 1763 ntAPPRIS P1 TSL 1 (best) BASIC31.79■■■□□ 2.68
SSH3Q8TE77 SHF-206ENST00000560471 2499 ntTSL 5 BASIC31.78■■■□□ 2.68
SSH3Q8TE77 SLC35D2-203ENST00000375259 1361 ntTSL 1 (best) BASIC31.78■■■□□ 2.68
SSH3Q8TE77 OVOL2-201ENST00000278780 1555 ntAPPRIS P1 TSL 1 (best) BASIC31.77■■■□□ 2.68
SSH3Q8TE77 GNAS-211ENST00000371095 1931 ntAPPRIS ALT1 TSL 1 (best) BASIC31.77■■■□□ 2.68
SSH3Q8TE77 IL17D-201ENST00000304920 1861 ntAPPRIS P1 TSL 1 (best) BASIC31.77■■■□□ 2.68
SSH3Q8TE77 KANSL1L-207ENST00000452086 2334 ntTSL 1 (best) BASIC31.77■■■□□ 2.68
SSH3Q8TE77 DRD5P2-201ENST00000421395 2012 ntBASIC31.76■■■□□ 2.68
SSH3Q8TE77 C5orf66-AS1-201ENST00000507035 843 ntTSL 2 BASIC31.76■■■□□ 2.67
SSH3Q8TE77 RNF166-209ENST00000567844 633 ntTSL 5 BASIC31.76■■■□□ 2.67
SSH3Q8TE77 EBPL-201ENST00000242827 914 ntAPPRIS P1 TSL 1 (best) BASIC31.75■■■□□ 2.67
SSH3Q8TE77 PQLC1-203ENST00000397778 2555 ntAPPRIS P3 TSL 1 (best) BASIC31.74■■■□□ 2.67
SSH3Q8TE77 WSB2-201ENST00000315436 2646 ntAPPRIS P1 TSL 1 (best) BASIC31.74■■■□□ 2.67
Retrieved 100 of 98,524 protein–RNA pairs in 88.3 ms