Protein–RNA interactions for Protein: Q8NFH5

NUP35, Nucleoporin NUP53, humanhuman

Predictions only

Length 326 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NUP35Q8NFH5 ZNF692-201ENST00000306601 1931 ntAPPRIS P3 TSL 1 (best) BASIC19.18■□□□□ 0.66
NUP35Q8NFH5 GAL3ST1-204ENST00000402369 1712 ntAPPRIS P1 TSL 3 BASIC19.18■□□□□ 0.66
NUP35Q8NFH5 C11orf80-210ENST00000527634 1666 ntAPPRIS ALT2 TSL 5 BASIC19.17■□□□□ 0.66
NUP35Q8NFH5 GATA3-AS1-201ENST00000355358 2214 ntTSL 2 BASIC19.17■□□□□ 0.66
NUP35Q8NFH5 LINC01003-201ENST00000564834 1764 ntBASIC19.17■□□□□ 0.66
NUP35Q8NFH5 FSD1-201ENST00000221856 1831 ntAPPRIS P1 TSL 1 (best) BASIC19.17■□□□□ 0.66
NUP35Q8NFH5 ABHD17C-202ENST00000558464 1976 ntTSL 1 (best) BASIC19.17■□□□□ 0.66
NUP35Q8NFH5 SLC35A1-203ENST00000369557 1653 ntTSL 2 BASIC19.17■□□□□ 0.66
NUP35Q8NFH5 FAH-213ENST00000561421 1549 ntAPPRIS P1 TSL 1 (best) BASIC19.16■□□□□ 0.66
NUP35Q8NFH5 RNF19B-202ENST00000356990 2598 ntTSL 1 (best) BASIC19.16■□□□□ 0.66
NUP35Q8NFH5 PRKAR1B-203ENST00000403562 1917 ntAPPRIS P1 TSL 1 (best) BASIC19.16■□□□□ 0.66
NUP35Q8NFH5 CTSA-203ENST00000372459 1972 ntTSL 1 (best) BASIC19.16■□□□□ 0.66
NUP35Q8NFH5 DERA-201ENST00000428559 1705 ntAPPRIS P1 TSL 1 (best) BASIC19.16■□□□□ 0.66
NUP35Q8NFH5 P2RY2-202ENST00000393596 2174 ntAPPRIS P1 TSL 1 (best) BASIC19.16■□□□□ 0.66
NUP35Q8NFH5 AMIGO1-201ENST00000369862 2229 ntAPPRIS P1 TSL 5 BASIC19.16■□□□□ 0.66
NUP35Q8NFH5 CGREF1-204ENST00000402550 1575 ntTSL 2 BASIC19.15■□□□□ 0.66
NUP35Q8NFH5 UCK1-204ENST00000372215 2167 ntAPPRIS P1 TSL 1 (best) BASIC19.15■□□□□ 0.66
NUP35Q8NFH5 POU2F2-208ENST00000529952 1716 ntAPPRIS ALT2 TSL 1 (best) BASIC19.15■□□□□ 0.66
NUP35Q8NFH5 TTBK2-207ENST00000567840 1961 ntTSL 1 (best) BASIC19.15■□□□□ 0.66
NUP35Q8NFH5 NOP53-201ENST00000246802 1528 ntAPPRIS P1 TSL 1 (best) BASIC19.15■□□□□ 0.66
NUP35Q8NFH5 ANKS1B-202ENST00000333732 1675 ntTSL 2 BASIC19.14■□□□□ 0.66
NUP35Q8NFH5 MAZ-201ENST00000219782 2698 ntAPPRIS P4 TSL 1 (best) BASIC19.14■□□□□ 0.65
NUP35Q8NFH5 HNRNPAB-205ENST00000506259 1674 ntAPPRIS ALT2 TSL 1 (best) BASIC19.14■□□□□ 0.65
NUP35Q8NFH5 EPB41L4B-202ENST00000374566 5800 ntAPPRIS P4 TSL 1 (best) BASIC19.13■□□□□ 0.65
NUP35Q8NFH5 LINC01578-201ENST00000553829 732 ntTSL 2 BASIC19.13■□□□□ 0.65
NUP35Q8NFH5 FAM89B-201ENST00000316409 1409 ntTSL 1 (best) BASIC19.13■□□□□ 0.65
NUP35Q8NFH5 PICALM-224ENST00000630913 2261 ntTSL 5 BASIC19.13■□□□□ 0.65
NUP35Q8NFH5 TOP1MT-208ENST00000519148 1868 ntTSL 2 BASIC19.12■□□□□ 0.65
NUP35Q8NFH5 AC091060.1-201ENST00000623524 1766 ntBASIC19.12■□□□□ 0.65
NUP35Q8NFH5 RNF150-204ENST00000507500 1530 ntTSL 1 (best) BASIC19.12■□□□□ 0.65
NUP35Q8NFH5 ZSWIM6-201ENST00000252744 5501 ntAPPRIS P1 TSL 5 BASIC19.12■□□□□ 0.65
NUP35Q8NFH5 CDC16-204ENST00000360383 2211 ntAPPRIS P3 TSL 5 BASIC19.12■□□□□ 0.65
NUP35Q8NFH5 CEBPB-201ENST00000303004 1956 ntAPPRIS P1 BASIC19.12■□□□□ 0.65
NUP35Q8NFH5 DLG3-203ENST00000374360 5905 ntAPPRIS P2 TSL 1 (best) BASIC19.11■□□□□ 0.65
NUP35Q8NFH5 MXD3-203ENST00000439742 1483 ntAPPRIS P1 TSL 1 (best) BASIC19.11■□□□□ 0.65
NUP35Q8NFH5 NRGN-201ENST00000284292 1306 ntAPPRIS P1 TSL 1 (best) BASIC19.11■□□□□ 0.65
NUP35Q8NFH5 FGF2-203ENST00000614010 867 ntTSL 1 (best) BASIC19.11■□□□□ 0.65
NUP35Q8NFH5 DNAH9-209ENST00000579828 1986 ntTSL 2 BASIC19.11■□□□□ 0.65
NUP35Q8NFH5 D2HGDH-203ENST00000403782 2208 ntTSL 2 BASIC19.1■□□□□ 0.65
NUP35Q8NFH5 SLC9A3R2-202ENST00000432365 1564 ntTSL 1 (best) BASIC19.1■□□□□ 0.65
NUP35Q8NFH5 FAM66E-202ENST00000533615 2087 ntTSL 2 BASIC19.1■□□□□ 0.65
NUP35Q8NFH5 AC079848.1-201ENST00000511301 327 ntTSL 3 BASIC19.1■□□□□ 0.65
NUP35Q8NFH5 FHL2-202ENST00000344213 1769 ntTSL 1 (best) BASIC19.09■□□□□ 0.65
NUP35Q8NFH5 DAZAP1-202ENST00000336761 2290 ntTSL 5 BASIC19.09■□□□□ 0.65
NUP35Q8NFH5 AC010864.1-201ENST00000609407 1511 ntBASIC19.09■□□□□ 0.65
NUP35Q8NFH5 AFDN-201ENST00000344191 5249 ntTSL 5 BASIC19.09■□□□□ 0.65
NUP35Q8NFH5 GATS-205ENST00000436886 2726 ntAPPRIS P1 TSL 1 (best) BASIC19.09■□□□□ 0.65
NUP35Q8NFH5 VRK2-202ENST00000412104 1916 ntTSL 1 (best) BASIC19.08■□□□□ 0.65
NUP35Q8NFH5 PPP1R14C-201ENST00000361131 2152 ntAPPRIS P1 TSL 1 (best) BASIC19.08■□□□□ 0.65
NUP35Q8NFH5 RUNX2-203ENST00000371436 1588 ntAPPRIS ALT2 TSL 5 BASIC19.08■□□□□ 0.65
NUP35Q8NFH5 TADA2B-201ENST00000310074 4350 ntAPPRIS P1 TSL 1 (best) BASIC19.08■□□□□ 0.64
NUP35Q8NFH5 EBF4-210ENST00000609451 2012 ntAPPRIS ALT1 TSL 5 BASIC19.08■□□□□ 0.64
NUP35Q8NFH5 C8orf58-206ENST00000614574 1955 ntAPPRIS ALT2 TSL 5 BASIC19.08■□□□□ 0.64
NUP35Q8NFH5 OTUD5-201ENST00000156084 2740 ntAPPRIS P3 TSL 1 (best) BASIC19.08■□□□□ 0.64
NUP35Q8NFH5 EBPL-203ENST00000378270 579 ntTSL 2 BASIC19.07■□□□□ 0.64
NUP35Q8NFH5 ARMC10-204ENST00000425331 2443 ntTSL 2 BASIC19.07■□□□□ 0.64
NUP35Q8NFH5 AC020928.2-201ENST00000588717 2197 ntBASIC19.07■□□□□ 0.64
NUP35Q8NFH5 HTRA1-201ENST00000368984 2120 ntAPPRIS P1 TSL 1 (best) BASIC19.07■□□□□ 0.64
NUP35Q8NFH5 TNFRSF25-204ENST00000356876 1625 ntAPPRIS ALT2 TSL 1 (best) BASIC19.07■□□□□ 0.64
NUP35Q8NFH5 ZDHHC16-207ENST00000393760 2014 ntAPPRIS P4 TSL 1 (best) BASIC19.07■□□□□ 0.64
NUP35Q8NFH5 DACT1-206ENST00000556859 2239 ntAPPRIS ALT2 TSL 2 BASIC19.06■□□□□ 0.64
NUP35Q8NFH5 PPP3CC-204ENST00000518852 1598 ntTSL 2 BASIC19.06■□□□□ 0.64
NUP35Q8NFH5 CTU1-201ENST00000421832 2087 ntAPPRIS P1 TSL 2 BASIC19.06■□□□□ 0.64
NUP35Q8NFH5 ACSS1-202ENST00000376726 2244 ntTSL 2 BASIC19.06■□□□□ 0.64
NUP35Q8NFH5 DNMT3A-206ENST00000406659 1775 ntTSL 1 (best) BASIC19.05■□□□□ 0.64
NUP35Q8NFH5 KLC1-203ENST00000347839 2271 ntTSL 5 BASIC19.05■□□□□ 0.64
NUP35Q8NFH5 QKI-207ENST00000453779 5685 ntTSL 1 (best) BASIC19.05■□□□□ 0.64
NUP35Q8NFH5 CATIP-201ENST00000289388 1323 ntAPPRIS P1 TSL 1 (best) BASIC19.04■□□□□ 0.64
NUP35Q8NFH5 AP004833.2-201ENST00000532228 1454 ntBASIC19.04■□□□□ 0.64
NUP35Q8NFH5 MPP6-203ENST00000409761 1703 ntTSL 5 BASIC19.04■□□□□ 0.64
NUP35Q8NFH5 MBOAT7-205ENST00000431666 2471 ntTSL 1 (best) BASIC19.04■□□□□ 0.64
NUP35Q8NFH5 ZNF639-209ENST00000496856 2033 ntAPPRIS P1 TSL 1 (best) BASIC19.04■□□□□ 0.64
NUP35Q8NFH5 PHF20L1-207ENST00000395379 1998 ntTSL 5 BASIC19.04■□□□□ 0.64
NUP35Q8NFH5 RALY-201ENST00000246194 1789 ntAPPRIS P4 TSL 1 (best) BASIC19.04■□□□□ 0.64
NUP35Q8NFH5 KCNMA1-283ENST00000640523 5425 ntAPPRIS ALT2 TSL 5 BASIC19.03■□□□□ 0.64
NUP35Q8NFH5 CPLX1-203ENST00000505203 2011 ntTSL 2 BASIC19.03■□□□□ 0.64
NUP35Q8NFH5 NXPH4-201ENST00000349394 1804 ntAPPRIS P1 TSL 1 (best) BASIC19.03■□□□□ 0.64
NUP35Q8NFH5 SLC9A3-201ENST00000264938 2584 ntAPPRIS P3 TSL 1 (best) BASIC19.03■□□□□ 0.64
NUP35Q8NFH5 SNAI3-AS1-204ENST00000567997 2048 ntBASIC19.03■□□□□ 0.64
NUP35Q8NFH5 LMTK3-201ENST00000270238 4972 ntAPPRIS P2 TSL 1 (best) BASIC19.03■□□□□ 0.64
NUP35Q8NFH5 RTN2-208ENST00000590526 2357 ntTSL 5 BASIC19.03■□□□□ 0.64
NUP35Q8NFH5 TSPOAP1-AS1-205ENST00000580022 2337 ntTSL 2 BASIC19.02■□□□□ 0.64
NUP35Q8NFH5 SNX5-201ENST00000377759 2270 ntAPPRIS P1 TSL 1 (best) BASIC19.02■□□□□ 0.64
NUP35Q8NFH5 PURG-202ENST00000475541 2875 ntAPPRIS P1 BASIC19.02■□□□□ 0.64
NUP35Q8NFH5 DNPEP-201ENST00000273075 2425 ntAPPRIS P3 TSL 1 (best) BASIC19.02■□□□□ 0.63
NUP35Q8NFH5 IFFO2-203ENST00000455833 6188 ntAPPRIS P1 TSL 5 BASIC19.02■□□□□ 0.63
NUP35Q8NFH5 APLP1-201ENST00000221891 2495 ntAPPRIS P1 TSL 1 (best) BASIC19.01■□□□□ 0.63
NUP35Q8NFH5 MAD2L2-201ENST00000235310 1860 ntAPPRIS P1 TSL 2 BASIC19.01■□□□□ 0.63
NUP35Q8NFH5 ALG2-203ENST00000476832 1880 ntAPPRIS P1 TSL 1 (best) BASIC19.01■□□□□ 0.63
NUP35Q8NFH5 MXRA7-202ENST00000375036 1950 ntAPPRIS ALT2 TSL 2 BASIC19.01■□□□□ 0.63
NUP35Q8NFH5 CCDC61-204ENST00000595358 1817 ntAPPRIS P2 TSL 5 BASIC19.01■□□□□ 0.63
NUP35Q8NFH5 TNFRSF25-205ENST00000377782 1632 ntAPPRIS P4 TSL 1 (best) BASIC19■□□□□ 0.63
NUP35Q8NFH5 LCNL1-201ENST00000408973 1839 ntAPPRIS P1 TSL 2 BASIC19■□□□□ 0.63
NUP35Q8NFH5 UNCX-201ENST00000316333 2048 ntAPPRIS P1 TSL 1 (best) BASIC19■□□□□ 0.63
NUP35Q8NFH5 STUB1-205ENST00000565677 1560 ntTSL 1 (best) BASIC19■□□□□ 0.63
NUP35Q8NFH5 GSTZ1-201ENST00000216465 1338 ntAPPRIS P2 TSL 1 (best) BASIC19■□□□□ 0.63
NUP35Q8NFH5 AGPAT2-202ENST00000371696 1512 ntAPPRIS P1 TSL 1 (best) BASIC18.99■□□□□ 0.63
NUP35Q8NFH5 HMCES-202ENST00000389735 1763 ntAPPRIS P1 TSL 1 (best) BASIC18.98■□□□□ 0.63
NUP35Q8NFH5 CCDC136-206ENST00000464832 1720 ntAPPRIS ALT2 TSL 5 BASIC18.98■□□□□ 0.63
NUP35Q8NFH5 PWWP2B-201ENST00000305233 2651 ntAPPRIS P1 TSL 1 (best) BASIC18.98■□□□□ 0.63
Retrieved 100 of 98,524 protein–RNA pairs in 70.7 ms