Protein–RNA interactions for Protein: Q8NDX1

PSD4, PH and SEC7 domain-containing protein 4, humanhuman

Predictions only

Length 1,056 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PSD4Q8NDX1 TCAM1P-201ENST00000463377 452 ntTSL 3 BASIC23.94■■□□□ 1.42
PSD4Q8NDX1 SPIRE1-202ENST00000409402 5665 ntAPPRIS ALT2 TSL 1 (best) BASIC23.94■■□□□ 1.42
PSD4Q8NDX1 AL135925.1-201ENST00000605920 1701 ntBASIC23.93■■□□□ 1.42
PSD4Q8NDX1 RUNDC3A-206ENST00000590941 1675 ntTSL 1 (best) BASIC23.92■■□□□ 1.42
PSD4Q8NDX1 C14orf80-202ENST00000334656 1358 ntAPPRIS ALT2 TSL 2 BASIC23.92■■□□□ 1.42
PSD4Q8NDX1 MBD2-201ENST00000256429 5188 ntAPPRIS P1 TSL 1 (best) BASIC23.92■■□□□ 1.42
PSD4Q8NDX1 WNT5A-AS1-201ENST00000469484 500 ntTSL 3 BASIC23.92■■□□□ 1.42
PSD4Q8NDX1 MBP-237ENST00000579129 1052 ntTSL 5 BASIC23.92■■□□□ 1.42
PSD4Q8NDX1 EFNA3-201ENST00000368408 1782 ntAPPRIS P1 TSL 1 (best) BASIC23.92■■□□□ 1.42
PSD4Q8NDX1 FOXG1-201ENST00000313071 4890 ntAPPRIS P1 BASIC23.91■■□□□ 1.42
PSD4Q8NDX1 PCSK6-216ENST00000615296 2921 ntTSL 5 BASIC23.91■■□□□ 1.42
PSD4Q8NDX1 SLC52A2-201ENST00000329994 1896 ntAPPRIS P1 TSL 1 (best) BASIC23.9■■□□□ 1.42
PSD4Q8NDX1 H2AFV-204ENST00000350771 687 ntTSL 2 BASIC23.9■■□□□ 1.42
PSD4Q8NDX1 RNF166-209ENST00000567844 633 ntTSL 5 BASIC23.9■■□□□ 1.42
PSD4Q8NDX1 DUX4L11-201ENST00000611504 1267 ntBASIC23.9■■□□□ 1.42
PSD4Q8NDX1 DUX4L12-201ENST00000614593 1267 ntBASIC23.9■■□□□ 1.42
PSD4Q8NDX1 DUX4L14-201ENST00000621227 1267 ntBASIC23.9■■□□□ 1.42
PSD4Q8NDX1 FOXE3-201ENST00000335071 1981 ntAPPRIS P1 BASIC23.9■■□□□ 1.42
PSD4Q8NDX1 ST6GALNAC6-205ENST00000373146 2460 ntAPPRIS P3 TSL 1 (best) BASIC23.9■■□□□ 1.42
PSD4Q8NDX1 BTBD7-201ENST00000298896 2621 ntTSL 1 (best) BASIC23.9■■□□□ 1.42
PSD4Q8NDX1 FOXQ1-201ENST00000296839 2309 ntAPPRIS P1 BASIC23.89■■□□□ 1.42
PSD4Q8NDX1 EBAG9-202ENST00000395785 1467 ntAPPRIS P1 TSL 1 (best) BASIC23.89■■□□□ 1.42
PSD4Q8NDX1 MACF1-219ENST00000484793 834 ntTSL 2 BASIC23.89■■□□□ 1.41
PSD4Q8NDX1 HAUS7-201ENST00000370210 1593 ntAPPRIS ALT2 TSL 2 BASIC23.89■■□□□ 1.41
PSD4Q8NDX1 C9orf40-201ENST00000376854 2327 ntAPPRIS P1 TSL 1 (best) BASIC23.89■■□□□ 1.41
PSD4Q8NDX1 RRNAD1-201ENST00000368216 2254 ntAPPRIS P3 TSL 1 (best) BASIC23.87■■□□□ 1.41
PSD4Q8NDX1 ARHGAP22-202ENST00000374170 2107 ntTSL 5 BASIC23.87■■□□□ 1.41
PSD4Q8NDX1 FAAH-201ENST00000243167 2094 ntAPPRIS P1 TSL 1 (best) BASIC23.87■■□□□ 1.41
PSD4Q8NDX1 CALM3-209ENST00000597743 577 ntTSL 4 BASIC23.87■■□□□ 1.41
PSD4Q8NDX1 BARX1-201ENST00000253968 1533 ntAPPRIS P1 TSL 1 (best) BASIC23.87■■□□□ 1.41
PSD4Q8NDX1 SMDT1-201ENST00000331479 1567 ntAPPRIS P1 TSL 1 (best) BASIC23.86■■□□□ 1.41
PSD4Q8NDX1 FAM189B-210ENST00000621094 1335 ntTSL 1 (best) BASIC23.86■■□□□ 1.41
PSD4Q8NDX1 CAPNS1-211ENST00000590874 926 ntTSL 5 BASIC23.86■■□□□ 1.41
PSD4Q8NDX1 ENKD1-201ENST00000243878 1579 ntAPPRIS P1 TSL 1 (best) BASIC23.86■■□□□ 1.41
PSD4Q8NDX1 IL17D-201ENST00000304920 1861 ntAPPRIS P1 TSL 1 (best) BASIC23.85■■□□□ 1.41
PSD4Q8NDX1 CLEC3B-202ENST00000428034 752 ntTSL 2 BASIC23.85■■□□□ 1.41
PSD4Q8NDX1 C5orf66-AS1-201ENST00000507035 843 ntTSL 2 BASIC23.85■■□□□ 1.41
PSD4Q8NDX1 TRIM52-AS1-203ENST00000509252 529 ntTSL 3 BASIC23.85■■□□□ 1.41
PSD4Q8NDX1 ACOT12-204ENST00000513751 612 ntTSL 1 (best) BASIC23.85■■□□□ 1.41
PSD4Q8NDX1 TM6SF1-202ENST00000322019 2074 ntAPPRIS P1 TSL 1 (best) BASIC23.84■■□□□ 1.41
PSD4Q8NDX1 AGPS-202ENST00000409888 815 ntTSL 4 BASIC23.84■■□□□ 1.41
PSD4Q8NDX1 ZNF775-201ENST00000329630 2257 ntAPPRIS P1 TSL 1 (best) BASIC23.84■■□□□ 1.41
PSD4Q8NDX1 NREP-202ENST00000379671 2581 ntAPPRIS P1 TSL 1 (best) BASIC23.83■■□□□ 1.41
PSD4Q8NDX1 TOMM40-201ENST00000252487 1707 ntAPPRIS P2 TSL 1 (best) BASIC23.83■■□□□ 1.41
PSD4Q8NDX1 TOMM40-202ENST00000405636 1709 ntAPPRIS P2 TSL 1 (best) BASIC23.83■■□□□ 1.41
PSD4Q8NDX1 PGM5P2-201ENST00000613141 1980 ntTSL 1 (best) BASIC23.82■■□□□ 1.4
PSD4Q8NDX1 MIR3648-2-201ENST00000581792 180 ntBASIC23.82■■□□□ 1.4
PSD4Q8NDX1 FKBP1A-210ENST00000614856 562 ntTSL 2 BASIC23.82■■□□□ 1.4
PSD4Q8NDX1 MIR3648-1-201ENST00000615959 180 ntBASIC23.82■■□□□ 1.4
PSD4Q8NDX1 GDI1-215ENST00000630693 786 ntTSL 4 BASIC23.82■■□□□ 1.4
PSD4Q8NDX1 TSPOAP1-AS1-203ENST00000579527 2042 ntTSL 2 BASIC23.82■■□□□ 1.4
PSD4Q8NDX1 LINC00273-201ENST00000539813 1452 ntBASIC23.81■■□□□ 1.4
PSD4Q8NDX1 SLC30A10-202ENST00000366926 1915 ntAPPRIS P1 TSL 1 (best) BASIC23.81■■□□□ 1.4
PSD4Q8NDX1 FSD1L-208ENST00000495708 1906 ntTSL 1 (best) BASIC23.81■■□□□ 1.4
PSD4Q8NDX1 PLSCR3-202ENST00000535512 2067 ntAPPRIS P1 TSL 1 (best) BASIC23.81■■□□□ 1.4
PSD4Q8NDX1 AC135731.1-201ENST00000569415 2548 ntBASIC23.81■■□□□ 1.4
PSD4Q8NDX1 WHRN-203ENST00000374057 1718 ntTSL 2 BASIC23.81■■□□□ 1.4
PSD4Q8NDX1 ZNF787-203ENST00000610935 1925 ntAPPRIS P1 TSL 1 (best) BASIC23.8■■□□□ 1.4
PSD4Q8NDX1 GKAP1-202ENST00000376365 1511 ntTSL 1 (best) BASIC23.8■■□□□ 1.4
PSD4Q8NDX1 GRK6-206ENST00000507633 1660 ntTSL 5 BASIC23.8■■□□□ 1.4
PSD4Q8NDX1 JMJD8-202ENST00000562111 823 ntTSL 2 BASIC23.8■■□□□ 1.4
PSD4Q8NDX1 CCM2L-201ENST00000262659 2523 ntAPPRIS P1 TSL 1 (best) BASIC23.8■■□□□ 1.4
PSD4Q8NDX1 COQ2-202ENST00000311469 1641 ntAPPRIS P2 TSL 1 (best) BASIC23.8■■□□□ 1.4
PSD4Q8NDX1 LINC02323-201ENST00000559946 1603 ntTSL 3 BASIC23.8■■□□□ 1.4
PSD4Q8NDX1 P2RX2-203ENST00000350048 1344 ntTSL 1 (best) BASIC23.8■■□□□ 1.4
PSD4Q8NDX1 TMEM251-202ENST00000415050 1303 ntTSL 2 BASIC23.8■■□□□ 1.4
PSD4Q8NDX1 TESK1-201ENST00000336395 2421 ntAPPRIS P1 TSL 1 (best) BASIC23.8■■□□□ 1.4
PSD4Q8NDX1 AP003068.2-202ENST00000526623 1662 ntTSL 2 BASIC23.79■■□□□ 1.4
PSD4Q8NDX1 AC127502.1-201ENST00000399971 1502 ntBASIC23.79■■□□□ 1.4
PSD4Q8NDX1 ZNF276-202ENST00000443381 2267 ntAPPRIS P1 TSL 1 (best) BASIC23.79■■□□□ 1.4
PSD4Q8NDX1 HNRNPAB-202ENST00000358344 1796 ntAPPRIS P4 TSL 1 (best) BASIC23.79■■□□□ 1.4
PSD4Q8NDX1 HSD17B1-201ENST00000225929 1265 ntAPPRIS ALT2 TSL 2 BASIC23.79■■□□□ 1.4
PSD4Q8NDX1 RPS2-202ENST00000526522 924 ntTSL 2 BASIC23.79■■□□□ 1.4
PSD4Q8NDX1 AC016575.1-201ENST00000607026 382 ntBASIC23.79■■□□□ 1.4
PSD4Q8NDX1 CR559946.2-201ENST00000623684 991 ntBASIC23.79■■□□□ 1.4
PSD4Q8NDX1 ATPAF1-202ENST00000371937 1827 ntAPPRIS P1 TSL 1 (best) BASIC23.78■■□□□ 1.4
PSD4Q8NDX1 PLSCR3-209ENST00000574401 2032 ntAPPRIS P1 TSL 1 (best) BASIC23.78■■□□□ 1.4
PSD4Q8NDX1 AP000251.1-201ENST00000433071 822 ntTSL 1 (best) BASIC23.78■■□□□ 1.4
PSD4Q8NDX1 C11orf95-204ENST00000546282 390 ntTSL 3 BASIC23.78■■□□□ 1.4
PSD4Q8NDX1 MAZ-208ENST00000563402 1461 ntTSL 5 BASIC23.78■■□□□ 1.4
PSD4Q8NDX1 MAZ-210ENST00000566906 1455 ntTSL 5 BASIC23.78■■□□□ 1.4
PSD4Q8NDX1 HNRNPAB-205ENST00000506259 1674 ntAPPRIS ALT2 TSL 1 (best) BASIC23.78■■□□□ 1.4
PSD4Q8NDX1 ZBTB10-204ENST00000455036 5458 ntAPPRIS P3 TSL 2 BASIC23.78■■□□□ 1.4
PSD4Q8NDX1 DPF1-202ENST00000412732 2303 ntTSL 1 (best) BASIC23.78■■□□□ 1.4
PSD4Q8NDX1 COL13A1-213ENST00000520267 2276 ntAPPRIS ALT2 TSL 5 BASIC23.77■■□□□ 1.4
PSD4Q8NDX1 SHOX2-204ENST00000483851 1866 ntAPPRIS ALT2 TSL 2 BASIC23.77■■□□□ 1.4
PSD4Q8NDX1 EBPL-201ENST00000242827 914 ntAPPRIS P1 TSL 1 (best) BASIC23.77■■□□□ 1.4
PSD4Q8NDX1 AURKAIP1-203ENST00000338370 1072 ntAPPRIS P1 TSL 1 (best) BASIC23.77■■□□□ 1.4
PSD4Q8NDX1 PLSCR3-214ENST00000619711 2066 ntTSL 5 BASIC23.77■■□□□ 1.4
PSD4Q8NDX1 MIR639-201ENST00000384974 98 ntBASIC23.76■■□□□ 1.39
PSD4Q8NDX1 AL118558.1-203ENST00000553701 447 ntTSL 3 BASIC23.76■■□□□ 1.39
PSD4Q8NDX1 DUX4L13-201ENST00000554103 1267 ntBASIC23.76■■□□□ 1.39
PSD4Q8NDX1 DUX4L15-201ENST00000611059 1267 ntBASIC23.76■■□□□ 1.39
PSD4Q8NDX1 DUX4L23-201ENST00000615195 1269 ntBASIC23.76■■□□□ 1.39
PSD4Q8NDX1 DUX4L24-201ENST00000617576 1269 ntBASIC23.76■■□□□ 1.39
PSD4Q8NDX1 DUX4L22-201ENST00000618238 1269 ntBASIC23.76■■□□□ 1.39
PSD4Q8NDX1 DUX4L20-201ENST00000619712 1269 ntBASIC23.76■■□□□ 1.39
PSD4Q8NDX1 DUX4L21-201ENST00000622058 1269 ntBASIC23.76■■□□□ 1.39
PSD4Q8NDX1 DUX4L10-201ENST00000622460 1267 ntBASIC23.76■■□□□ 1.39
PSD4Q8NDX1 DUX4L25-201ENST00000624915 1269 ntBASIC23.76■■□□□ 1.39
Retrieved 100 of 98,524 protein–RNA pairs in 16.8 ms