Protein–RNA interactions for Protein: Q86U42

PABPN1, Polyadenylate-binding protein 2, humanhuman

Known RBP eCLIP

Length 306 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PABPN1Q86U42 ARHGEF1-210ENST00000594521 826 ntTSL 536.07■■■■□ 3.369e-7■■■■□ 25.9
PABPN1Q86U42 SEC61A1-201ENST00000243253 3635 ntAPPRIS P1 TSL 1 (best) BASIC18.46■□□□□ 0.551e-6■■■■□ 25.9
PABPN1Q86U42 SEC61A1-202ENST00000424880 3238 ntTSL 2 BASIC17.06■□□□□ 0.321e-6■■■■□ 25.9
PABPN1Q86U42 SEC61A1-205ENST00000483956 3046 ntTSL 1 (best)16.87■□□□□ 0.291e-6■■■■□ 25.9
PABPN1Q86U42 CLASRP-207ENST00000587112 867 ntTSL 1 (best)25.38■■□□□ 1.651e-6■■■■□ 25.9
PABPN1Q86U42 CLASRP-213ENST00000591410 572 ntTSL 422.98■■□□□ 1.271e-6■■■■□ 25.9
PABPN1Q86U42 VARS2-207ENST00000476162 2228 ntTSL 1 (best)26.12■■□□□ 1.771e-7■■■■□ 25.8
PABPN1Q86U42 AES-202ENST00000327141 1608 ntAPPRIS P1 TSL 1 (best) BASIC63.76■■■■■ 7.83e-7■■■■□ 25.8
PABPN1Q86U42 AES-207ENST00000586839 942 ntTSL 1 (best) BASIC44.31■■■■■ 4.683e-7■■■■□ 25.8
PABPN1Q86U42 EFEMP2-201ENST00000307998 2034 ntAPPRIS P1 TSL 1 (best) BASIC41.69■■■■■ 4.279e-7■■■■□ 25.8
PABPN1Q86U42 AES-210ENST00000590067 1100 ntTSL 236.69■■■■□ 3.463e-7■■■■□ 25.8
PABPN1Q86U42 AES-206ENST00000586742 1666 ntTSL 336.35■■■■□ 3.413e-7■■■■□ 25.8
PABPN1Q86U42 EFEMP2-210ENST00000528176 1504 ntTSL 5 BASIC33.96■■■■□ 3.039e-7■■■■□ 25.8
PABPN1Q86U42 EFEMP2-217ENST00000531972 1813 ntTSL 1 (best)33.29■■■□□ 2.929e-7■■■■□ 25.8
PABPN1Q86U42 DLG4-209ENST00000491753 869 ntTSL 231.73■■■□□ 2.673e-7■■■■□ 25.8
PABPN1Q86U42 AES-209ENST00000587393 1082 ntTSL 230.27■■■□□ 2.443e-7■■■■□ 25.8
PABPN1Q86U42 AES-201ENST00000221561 1884 ntTSL 1 (best) BASIC29.95■■■□□ 2.393e-7■■■■□ 25.8
PABPN1Q86U42 DLG4-202ENST00000399506 3185 ntAPPRIS ALT1 TSL 2 BASIC26.81■■□□□ 1.883e-7■■■■□ 25.8
PABPN1Q86U42 DLG4-201ENST00000302955 3184 ntAPPRIS P3 TSL 5 BASIC26.41■■□□□ 1.823e-7■■■■□ 25.8
PABPN1Q86U42 EFEMP2-205ENST00000526628 2277 ntTSL 225.23■■□□□ 1.639e-7■■■■□ 25.8
PABPN1Q86U42 EFEMP2-216ENST00000531645 674 ntTSL 324.58■■□□□ 1.539e-7■■■■□ 25.8
PABPN1Q86U42 TRPV1-201ENST00000310522 2340 ntTSL 1 (best) BASIC23.42■■□□□ 1.343e-7■■■■□ 25.8
PABPN1Q86U42 EFEMP2-211ENST00000528409 658 ntTSL 323.19■■□□□ 1.39e-7■■■■□ 25.8
PABPN1Q86U42 DLG4-208ENST00000489885 1894 ntTSL 1 (best)22.2■■□□□ 1.143e-7■■■■□ 25.8
PABPN1Q86U42 EFEMP2-206ENST00000526911 472 ntTSL 321.54■■□□□ 1.049e-7■■■■□ 25.8
PABPN1Q86U42 TRPV1-209ENST00000576351 2525 ntTSL 5 BASIC21.08■□□□□ 0.973e-7■■■■□ 25.8
PABPN1Q86U42 LMBR1L-213ENST00000549730 585 ntTSL 520.01■□□□□ 0.793e-7■■■■□ 25.8
PABPN1Q86U42 TRPV1-204ENST00000425167 2607 ntTSL 1 (best) BASIC19.73■□□□□ 0.753e-7■■■■□ 25.8
PABPN1Q86U42 TRPV1-206ENST00000571088 4105 ntAPPRIS P1 TSL 1 (best) BASIC19.56■□□□□ 0.723e-7■■■■□ 25.8
PABPN1Q86U42 DLG4-203ENST00000399510 3975 ntTSL 1 (best) BASIC19.38■□□□□ 0.693e-7■■■■□ 25.8
PABPN1Q86U42 AES-212ENST00000592414 3274 ntTSL 219.28■□□□□ 0.683e-7■■■■□ 25.8
PABPN1Q86U42 TRPV1-208ENST00000574085 2644 ntTSL 218.53■□□□□ 0.563e-7■■■■□ 25.8
PABPN1Q86U42 LMBR1L-219ENST00000551169 771 ntTSL 517.64■□□□□ 0.413e-7■■■■□ 25.8
PABPN1Q86U42 RNF216-205ENST00000425013 5639 ntAPPRIS ALT2 TSL 1 (best) BASIC17.61■□□□□ 0.412e-6■■■■□ 25.8
PABPN1Q86U42 TRPV1-207ENST00000572705 4166 ntAPPRIS P1 TSL 1 (best) BASIC15.61■□□□□ 0.093e-7■■■■□ 25.8
PABPN1Q86U42 TRPV1-202ENST00000399756 4068 ntAPPRIS P1 TSL 1 (best) BASIC15.17■□□□□ 0.023e-7■■■■□ 25.8
PABPN1Q86U42 TRPV1-203ENST00000399759 4092 ntAPPRIS P1 TSL 1 (best) BASIC14.81□□□□□ -0.043e-7■■■■□ 25.8
PABPN1Q86U42 AES-211ENST00000592330 275 ntTSL 59.64□□□□□ -0.873e-7■■■■□ 25.8
PABPN1Q86U42 GSDMD-216ENST00000534602 480 ntTSL 244.03■■■■■ 4.645e-7■■■■□ 25.8
PABPN1Q86U42 REC8-204ENST00000559797 1007 ntTSL 529.04■■■□□ 2.242e-7■■■■□ 25.7
PABPN1Q86U42 REC8-209ENST00000611366 2331 ntAPPRIS P1 TSL 1 (best) BASIC25.43■■□□□ 1.662e-7■■■■□ 25.7
PABPN1Q86U42 REC8-213ENST00000620473 2405 ntAPPRIS P1 TSL 2 BASIC22.41■■□□□ 1.182e-7■■■■□ 25.7
PABPN1Q86U42 REC8-202ENST00000558191 561 ntTSL 419.28■□□□□ 0.682e-7■■■■□ 25.7
PABPN1Q86U42 REC8-212ENST00000619469 2720 ntTSL 218.69■□□□□ 0.582e-7■■■■□ 25.7
PABPN1Q86U42 RTEL1-211ENST00000508582 4273 ntTSL 2 BASIC19.9■□□□□ 0.782e-7■■■■□ 25.7
PABPN1Q86U42 AL121845.2-202ENST00000476221 446 ntTSL 536.09■■■■□ 3.372e-9■■■■□ 25.7
PABPN1Q86U42 SIGMAR1-205ENST00000477726 840 ntTSL 1 (best) BASIC53.4■■■■■ 6.147e-7■■■■□ 25.6
PABPN1Q86U42 SIGMAR1-204ENST00000461426 939 ntTSL 1 (best)52.31■■■■■ 5.967e-7■■■■□ 25.6
PABPN1Q86U42 TXNRD2-205ENST00000400525 1874 ntTSL 5 BASIC47.4■■■■■ 5.187e-7■■■■□ 25.6
PABPN1Q86U42 SIGMAR1-203ENST00000378892 1743 ntTSL 2 BASIC44.86■■■■■ 4.777e-7■■■■□ 25.6
PABPN1Q86U42 SIGMAR1-201ENST00000277010 1656 ntAPPRIS P1 TSL 1 (best) BASIC43.88■■■■■ 4.617e-7■■■■□ 25.6
PABPN1Q86U42 TXNRD2-204ENST00000400521 2115 ntAPPRIS P2 TSL 1 (best) BASIC42.49■■■■■ 4.397e-7■■■■□ 25.6
PABPN1Q86U42 SLC22A18-201ENST00000312221 1628 ntAPPRIS P1 TSL 1 (best) BASIC40.86■■■■■ 4.137e-7■■■■□ 25.6
PABPN1Q86U42 OTUB1-203ENST00000428192 1296 ntAPPRIS P2 TSL 2 BASIC40.28■■■■■ 4.048e-7■■■■□ 25.6
PABPN1Q86U42 FAAH-201ENST00000243167 2094 ntAPPRIS P1 TSL 1 (best) BASIC40.15■■■■■ 4.027e-7■■■■□ 25.6
PABPN1Q86U42 OTUB1-211ENST00000543004 1647 ntTSL 5 BASIC39.6■■■■□ 3.938e-7■■■■□ 25.6
PABPN1Q86U42 INTS1-203ENST00000479671 245 ntTSL 238.16■■■■□ 3.77e-7■■■■□ 25.6
PABPN1Q86U42 TXNRD2-209ENST00000474308 1854 ntTSL 237.9■■■■□ 3.667e-7■■■■□ 25.6
PABPN1Q86U42 SIGMAR1-202ENST00000353468 1582 ntTSL 1 (best)37.04■■■■□ 3.527e-7■■■■□ 25.6
PABPN1Q86U42 OTUB1-209ENST00000538426 1729 ntAPPRIS P2 TSL 1 (best) BASIC37.02■■■■□ 3.528e-7■■■■□ 25.6
PABPN1Q86U42 TRMT2A-216ENST00000487668 1040 ntTSL 536.25■■■■□ 3.397e-7■■■■□ 25.6
PABPN1Q86U42 AC009084.1-201ENST00000566869 317 ntTSL 5 BASIC36.1■■■■□ 3.377e-7■■■■□ 25.6
PABPN1Q86U42 TXNRD2-202ENST00000400518 2025 ntAPPRIS ALT2 TSL 1 (best) BASIC36.03■■■■□ 3.367e-7■■■■□ 25.6
PABPN1Q86U42 SLC22A18-207ENST00000463571 1030 ntTSL 535.83■■■■□ 3.337e-7■■■■□ 25.6
PABPN1Q86U42 TXNRD2-212ENST00000485358 850 ntTSL 2 BASIC35.66■■■■□ 3.37e-7■■■■□ 25.6
PABPN1Q86U42 LTBP3-208ENST00000527339 619 ntTSL 335.49■■■■□ 3.277e-7■■■■□ 25.6
PABPN1Q86U42 SLC22A18-202ENST00000347936 1542 ntAPPRIS P1 TSL 1 (best) BASIC35.43■■■■□ 3.267e-7■■■■□ 25.6
PABPN1Q86U42 TXNRD2-220ENST00000634537 1086 ntTSL 535.27■■■■□ 3.247e-7■■■■□ 25.6
PABPN1Q86U42 SLC22A18-205ENST00000449603 682 ntTSL 334.69■■■■□ 3.147e-7■■■■□ 25.6
PABPN1Q86U42 COL16A1-204ENST00000440437 672 ntTSL 534.68■■■■□ 3.141e-6■■■■□ 25.6
PABPN1Q86U42 TXNRD2-219ENST00000634471 748 ntTSL 334.52■■■■□ 3.127e-7■■■■□ 25.6
PABPN1Q86U42 TXNRD2-207ENST00000462843 810 ntTSL 334.52■■■■□ 3.127e-7■■■■□ 25.6
PABPN1Q86U42 SLC22A18-203ENST00000380574 1755 ntAPPRIS P1 TSL 1 (best) BASIC34.39■■■■□ 3.17e-7■■■■□ 25.6
PABPN1Q86U42 OTUB1-210ENST00000541478 1803 ntTSL 5 BASIC34.22■■■■□ 3.078e-7■■■■□ 25.6
PABPN1Q86U42 TRMT2A-204ENST00000439169 2473 ntTSL 5 BASIC34.16■■■■□ 3.067e-7■■■■□ 25.6
PABPN1Q86U42 CLSTN3-210ENST00000540931 910 ntTSL 233.86■■■■□ 3.017e-7■■■■□ 25.6
PABPN1Q86U42 TRMT2A-220ENST00000494820 1098 ntTSL 533.03■■■□□ 2.887e-7■■■■□ 25.6
PABPN1Q86U42 SLC22A18-206ENST00000449793 1225 ntTSL 5 BASIC32.97■■■□□ 2.877e-7■■■■□ 25.6
PABPN1Q86U42 COL16A1-209ENST00000470799 826 ntTSL 532.3■■■□□ 2.761e-6■■■■□ 25.6
PABPN1Q86U42 TRMT2A-206ENST00000444845 739 ntTSL 332.27■■■□□ 2.767e-7■■■■□ 25.6
PABPN1Q86U42 TRMT2A-203ENST00000404751 2498 ntAPPRIS ALT2 TSL 2 BASIC32.24■■■□□ 2.757e-7■■■■□ 25.6
PABPN1Q86U42 SLC22A18-211ENST00000495518 588 ntTSL 232.2■■■□□ 2.757e-7■■■■□ 25.6
PABPN1Q86U42 TRMT2A-205ENST00000444256 426 ntTSL 531.95■■■□□ 2.717e-7■■■■□ 25.6
PABPN1Q86U42 FAAH-203ENST00000484697 1046 ntTSL 1 (best)31.91■■■□□ 2.77e-7■■■■□ 25.6
PABPN1Q86U42 OTUB1-206ENST00000535715 1391 ntTSL 5 BASIC31.62■■■□□ 2.658e-7■■■■□ 25.6
PABPN1Q86U42 TRMT2A-215ENST00000487378 654 ntTSL 230.81■■■□□ 2.527e-7■■■■□ 25.6
PABPN1Q86U42 RBM10-205ENST00000496012 509 ntTSL 530.38■■■□□ 2.457e-7■■■■□ 25.6
PABPN1Q86U42 COL16A1-213ENST00000482910 676 ntTSL 530.04■■■□□ 2.41e-6■■■■□ 25.6
PABPN1Q86U42 RBM10-204ENST00000478410 847 ntTSL 529.93■■■□□ 2.387e-7■■■■□ 25.6
PABPN1Q86U42 OTUB1-202ENST00000422031 2297 ntAPPRIS ALT1 TSL 5 BASIC29.84■■■□□ 2.378e-7■■■■□ 25.6
PABPN1Q86U42 SLC22A18-204ENST00000441077 831 ntTSL 529.78■■■□□ 2.367e-7■■■■□ 25.6
PABPN1Q86U42 DENND4B-201ENST00000361217 5706 ntAPPRIS P2 TSL 1 (best) BASIC29.2■■■□□ 2.277e-7■■■■□ 25.6
PABPN1Q86U42 TXNRD2-218ENST00000542719 2024 ntTSL 1 (best) BASIC28.99■■■□□ 2.237e-7■■■■□ 25.6
PABPN1Q86U42 TXNRD2-213ENST00000487165 2020 ntTSL 1 (best)28.98■■■□□ 2.237e-7■■■■□ 25.6
PABPN1Q86U42 DENND4B-211ENST00000492898 951 ntTSL 528.94■■■□□ 2.227e-7■■■■□ 25.6
PABPN1Q86U42 CTSA-212ENST00000606394 584 ntTSL 428.86■■■□□ 2.217e-7■■■■□ 25.6
PABPN1Q86U42 TRMT2A-201ENST00000252136 2964 ntAPPRIS P3 TSL 1 (best) BASIC28.01■■■□□ 2.077e-7■■■■□ 25.6
PABPN1Q86U42 TXNRD2-206ENST00000462330 1129 ntTSL 3 BASIC27.83■■■□□ 2.057e-7■■■■□ 25.6
PABPN1Q86U42 MTA2-204ENST00000527204 2265 ntTSL 2 BASIC27.81■■■□□ 2.047e-7■■■■□ 25.6
PABPN1Q86U42 TXNRD2-203ENST00000400519 3155 ntAPPRIS ALT2 TSL 1 (best) BASIC27.68■■■□□ 2.027e-7■■■■□ 25.6
Retrieved 100 of 8,254 protein–RNA pairs in 501.3 ms