Protein–RNA interactions for Protein: Q7Z5J4

RAI1, Retinoic acid-induced protein 1, humanhuman

Predicted RBP Predictions only

Length 1,906 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RAI1Q7Z5J4 COQ2-202ENST00000311469 1641 ntAPPRIS P2 TSL 1 (best) BASIC22.23■■□□□ 1.15
RAI1Q7Z5J4 PKIG-207ENST00000372894 1191 ntAPPRIS P1 TSL 1 (best) BASIC22.22■■□□□ 1.15
RAI1Q7Z5J4 IGFBP2-201ENST00000233809 1439 ntAPPRIS P1 TSL 1 (best) BASIC22.21■■□□□ 1.15
RAI1Q7Z5J4 GXYLT1-201ENST00000280876 1937 ntAPPRIS ALT2 TSL 1 (best) BASIC22.21■■□□□ 1.15
RAI1Q7Z5J4 GPX1-201ENST00000419349 1106 ntBASIC22.21■■□□□ 1.15
RAI1Q7Z5J4 CARS2-201ENST00000257347 1879 ntAPPRIS P1 TSL 1 (best) BASIC22.2■■□□□ 1.15
RAI1Q7Z5J4 MAP3K8-203ENST00000375322 932 ntTSL 2 BASIC22.2■■□□□ 1.14
RAI1Q7Z5J4 ABHD17AP5-201ENST00000580133 923 ntBASIC22.2■■□□□ 1.14
RAI1Q7Z5J4 FTCD-204ENST00000397748 1955 ntTSL 1 (best) BASIC22.19■■□□□ 1.14
RAI1Q7Z5J4 CLTA-207ENST00000470744 1102 ntTSL 2 BASIC22.19■■□□□ 1.14
RAI1Q7Z5J4 RPS20-211ENST00000524349 752 ntTSL 1 (best) BASIC22.19■■□□□ 1.14
RAI1Q7Z5J4 S1PR4-201ENST00000246115 1565 ntAPPRIS P1 BASIC22.19■■□□□ 1.14
RAI1Q7Z5J4 ATRNL1-207ENST00000527407 1583 ntTSL 5 BASIC22.19■■□□□ 1.14
RAI1Q7Z5J4 AC135983.2-203ENST00000454486 1613 ntBASIC22.18■■□□□ 1.14
RAI1Q7Z5J4 BLOC1S3-202ENST00000587722 732 ntAPPRIS P1 BASIC22.18■■□□□ 1.14
RAI1Q7Z5J4 TOMM40-201ENST00000252487 1707 ntAPPRIS P2 TSL 1 (best) BASIC22.17■■□□□ 1.14
RAI1Q7Z5J4 TOMM40-202ENST00000405636 1709 ntAPPRIS P2 TSL 1 (best) BASIC22.17■■□□□ 1.14
RAI1Q7Z5J4 KCTD5-202ENST00000564195 774 ntTSL 5 BASIC22.16■■□□□ 1.14
RAI1Q7Z5J4 AC068134.2-201ENST00000437095 576 ntTSL 3 BASIC22.16■■□□□ 1.14
RAI1Q7Z5J4 TPT1-202ENST00000379055 948 ntTSL 2 BASIC22.15■■□□□ 1.14
RAI1Q7Z5J4 BANF1-208ENST00000533166 1135 ntAPPRIS P1 TSL 2 BASIC22.14■■□□□ 1.14
RAI1Q7Z5J4 GRK6-206ENST00000507633 1660 ntTSL 5 BASIC22.13■■□□□ 1.13
RAI1Q7Z5J4 WHAMMP2-203ENST00000563942 1603 ntBASIC22.13■■□□□ 1.13
RAI1Q7Z5J4 SSTR4-201ENST00000255008 1427 ntAPPRIS P1 BASIC22.12■■□□□ 1.13
RAI1Q7Z5J4 TMEM158-201ENST00000503771 1813 ntAPPRIS P1 BASIC22.12■■□□□ 1.13
RAI1Q7Z5J4 ADAT3-201ENST00000329478 1620 ntAPPRIS P1 TSL 1 (best) BASIC22.11■■□□□ 1.13
RAI1Q7Z5J4 SURF1-201ENST00000371974 1093 ntAPPRIS P1 TSL 1 (best) BASIC22.11■■□□□ 1.13
RAI1Q7Z5J4 SURF1-205ENST00000615505 991 ntTSL 1 (best) BASIC22.11■■□□□ 1.13
RAI1Q7Z5J4 TPM2-203ENST00000378292 2147 ntAPPRIS ALT1 TSL 1 (best) BASIC22.1■■□□□ 1.13
RAI1Q7Z5J4 AL135925.1-201ENST00000605920 1701 ntBASIC22.1■■□□□ 1.13
RAI1Q7Z5J4 KIF13A-207ENST00000502704 1330 ntTSL 1 (best) BASIC22.1■■□□□ 1.13
RAI1Q7Z5J4 AGO3-204ENST00000397828 1035 ntTSL 2 BASIC22.1■■□□□ 1.13
RAI1Q7Z5J4 LRRC61-202ENST00000359623 1877 ntAPPRIS P1 TSL 2 BASIC22.1■■□□□ 1.13
RAI1Q7Z5J4 TMEM147-202ENST00000392204 935 ntTSL 2 BASIC22.1■■□□□ 1.13
RAI1Q7Z5J4 BOK-AS1-201ENST00000434306 643 ntTSL 1 (best) BASIC22.1■■□□□ 1.13
RAI1Q7Z5J4 PGM5-201ENST00000396392 1782 ntTSL 1 (best) BASIC22.09■■□□□ 1.13
RAI1Q7Z5J4 RAB26-201ENST00000210187 1675 ntAPPRIS P1 TSL 1 (best) BASIC22.09■■□□□ 1.13
RAI1Q7Z5J4 GADD45A-205ENST00000617962 1142 ntTSL 1 (best) BASIC22.08■■□□□ 1.13
RAI1Q7Z5J4 LDB1-202ENST00000425280 2089 ntTSL 5 BASIC22.08■■□□□ 1.12
RAI1Q7Z5J4 GSX2-202ENST00000503800 1181 ntTSL 5 BASIC22.08■■□□□ 1.12
RAI1Q7Z5J4 ELOC-207ENST00000522337 816 ntAPPRIS P1 TSL 2 BASIC22.08■■□□□ 1.12
RAI1Q7Z5J4 NPW-202ENST00000566435 991 ntAPPRIS ALT2 TSL 1 (best) BASIC22.08■■□□□ 1.12
RAI1Q7Z5J4 AC148477.6-201ENST00000623746 465 ntBASIC22.08■■□□□ 1.12
RAI1Q7Z5J4 GAL3ST1-205ENST00000406361 1819 ntAPPRIS P1 TSL 2 BASIC22.07■■□□□ 1.12
RAI1Q7Z5J4 CAPNS1-201ENST00000246533 1918 ntAPPRIS P2 TSL 1 (best) BASIC22.07■■□□□ 1.12
RAI1Q7Z5J4 ZNF513-201ENST00000323703 2139 ntAPPRIS P1 TSL 1 (best) BASIC22.06■■□□□ 1.12
RAI1Q7Z5J4 HAUS7-201ENST00000370210 1593 ntAPPRIS ALT2 TSL 2 BASIC22.06■■□□□ 1.12
RAI1Q7Z5J4 FAM168B-201ENST00000389915 944 ntAPPRIS P1 TSL 3 BASIC22.06■■□□□ 1.12
RAI1Q7Z5J4 MDFIC-208ENST00000614186 1068 ntTSL 1 (best) BASIC22.06■■□□□ 1.12
RAI1Q7Z5J4 NRXN1-228ENST00000628364 2444 ntTSL 5 BASIC22.05■■□□□ 1.12
RAI1Q7Z5J4 PLEKHF2-202ENST00000519516 1144 ntAPPRIS P1 TSL 3 BASIC22.05■■□□□ 1.12
RAI1Q7Z5J4 LINC01896-206ENST00000575722 1256 ntTSL 2 BASIC22.05■■□□□ 1.12
RAI1Q7Z5J4 TSPAN4-207ENST00000397411 1025 ntAPPRIS P1 TSL 2 BASIC22.04■■□□□ 1.12
RAI1Q7Z5J4 SLC52A2-201ENST00000329994 1896 ntAPPRIS P1 TSL 1 (best) BASIC22.04■■□□□ 1.12
RAI1Q7Z5J4 ABCB10P1-201ENST00000614297 2181 ntBASIC22.04■■□□□ 1.12
RAI1Q7Z5J4 TAF10-201ENST00000299424 1215 ntAPPRIS P1 TSL 1 (best) BASIC22.04■■□□□ 1.12
RAI1Q7Z5J4 CEP120-209ENST00000515110 606 ntTSL 3 BASIC22.04■■□□□ 1.12
RAI1Q7Z5J4 C1QTNF8-201ENST00000328449 1627 ntAPPRIS P1 TSL 5 BASIC22.03■■□□□ 1.12
RAI1Q7Z5J4 AC008813.1-201ENST00000536597 885 ntBASIC22.03■■□□□ 1.12
RAI1Q7Z5J4 COL13A1-210ENST00000517713 2007 ntAPPRIS ALT2 TSL 5 BASIC22.03■■□□□ 1.12
RAI1Q7Z5J4 RNF126P1-201ENST00000567452 1320 ntBASIC22.03■■□□□ 1.12
RAI1Q7Z5J4 HSD17B12-202ENST00000395700 994 ntTSL 1 (best) BASIC22.02■■□□□ 1.12
RAI1Q7Z5J4 HSD11B1L-202ENST00000339423 1660 ntAPPRIS P3 TSL 1 (best) BASIC22.02■■□□□ 1.12
RAI1Q7Z5J4 RASSF8-202ENST00000381352 2320 ntTSL 1 (best) BASIC22.02■■□□□ 1.12
RAI1Q7Z5J4 MKNK2-202ENST00000309340 1744 ntAPPRIS ALT2 TSL 1 (best) BASIC22.02■■□□□ 1.12
RAI1Q7Z5J4 TM6SF1-202ENST00000322019 2074 ntAPPRIS P1 TSL 1 (best) BASIC22.02■■□□□ 1.12
RAI1Q7Z5J4 AC127502.1-201ENST00000399971 1502 ntBASIC22.02■■□□□ 1.12
RAI1Q7Z5J4 TSR3-201ENST00000007390 1243 ntAPPRIS P1 TSL 1 (best) BASIC22.02■■□□□ 1.11
RAI1Q7Z5J4 BAX-202ENST00000345358 793 ntAPPRIS P1 TSL 1 (best) BASIC22■■□□□ 1.11
RAI1Q7Z5J4 GLTP-201ENST00000318348 2356 ntAPPRIS P1 TSL 1 (best) BASIC22■■□□□ 1.11
RAI1Q7Z5J4 MARCKSL1-201ENST00000329421 1699 ntAPPRIS P1 TSL 1 (best) BASIC22■■□□□ 1.11
RAI1Q7Z5J4 PMS1-220ENST00000618056 1468 ntTSL 5 BASIC22■■□□□ 1.11
RAI1Q7Z5J4 LSM7-201ENST00000252622 529 ntAPPRIS P1 TSL 1 (best) BASIC22■■□□□ 1.11
RAI1Q7Z5J4 PTCH1-210ENST00000468211 1254 ntTSL 1 (best) BASIC22■■□□□ 1.11
RAI1Q7Z5J4 PEX7-203ENST00000541292 945 ntTSL 5 BASIC22■■□□□ 1.11
RAI1Q7Z5J4 HNRNPAB-202ENST00000358344 1796 ntAPPRIS P4 TSL 1 (best) BASIC21.99■■□□□ 1.11
RAI1Q7Z5J4 LRRC10B-201ENST00000378075 2219 ntAPPRIS P1 BASIC21.99■■□□□ 1.11
RAI1Q7Z5J4 HNRNPAB-205ENST00000506259 1674 ntAPPRIS ALT2 TSL 1 (best) BASIC21.99■■□□□ 1.11
RAI1Q7Z5J4 MAPK3-205ENST00000395202 1008 ntTSL 1 (best) BASIC21.99■■□□□ 1.11
RAI1Q7Z5J4 ST7-AS1-201ENST00000456775 1889 ntBASIC21.98■■□□□ 1.11
RAI1Q7Z5J4 IGFBPL1-201ENST00000377694 1093 ntAPPRIS P1 TSL 2 BASIC21.98■■□□□ 1.11
RAI1Q7Z5J4 MDFIC-203ENST00000423503 474 ntTSL 1 (best) BASIC21.98■■□□□ 1.11
RAI1Q7Z5J4 AC060814.1-201ENST00000554326 538 ntBASIC21.98■■□□□ 1.11
RAI1Q7Z5J4 C16orf74-204ENST00000602719 1002 ntAPPRIS ALT2 TSL 3 BASIC21.98■■□□□ 1.11
RAI1Q7Z5J4 MAPK8IP1P1-201ENST00000574657 1439 ntBASIC21.98■■□□□ 1.11
RAI1Q7Z5J4 SH3BP2-221ENST00000511747 2351 ntAPPRIS P3 TSL 1 (best) BASIC21.98■■□□□ 1.11
RAI1Q7Z5J4 PDF-201ENST00000288022 1158 ntAPPRIS P1 TSL 1 (best) BASIC21.98■■□□□ 1.11
RAI1Q7Z5J4 CDKN3-202ENST00000335183 893 ntAPPRIS P2 TSL 1 (best) BASIC21.98■■□□□ 1.11
RAI1Q7Z5J4 C1orf122-201ENST00000373042 973 ntAPPRIS P3 TSL 1 (best) BASIC21.98■■□□□ 1.11
RAI1Q7Z5J4 CDKN3-211ENST00000611205 874 ntAPPRIS ALT2 TSL 5 BASIC21.98■■□□□ 1.11
RAI1Q7Z5J4 C16orf95-206ENST00000618367 974 ntAPPRIS ALT2 TSL 2 BASIC21.98■■□□□ 1.11
RAI1Q7Z5J4 FAM149A-201ENST00000227065 2708 ntAPPRIS P2 TSL 1 (best) BASIC21.98■■□□□ 1.11
RAI1Q7Z5J4 IRX1-201ENST00000302006 1858 ntAPPRIS P1 TSL 1 (best) BASIC21.97■■□□□ 1.11
RAI1Q7Z5J4 NKX2-1-204ENST00000522719 1417 ntAPPRIS P1 TSL 1 (best) BASIC21.97■■□□□ 1.11
RAI1Q7Z5J4 NTF6A-201ENST00000591175 560 ntBASIC21.97■■□□□ 1.11
RAI1Q7Z5J4 DCUN1D5-201ENST00000260247 1337 ntAPPRIS P1 TSL 1 (best) BASIC21.97■■□□□ 1.11
RAI1Q7Z5J4 PI4KAP2-202ENST00000450651 2294 ntTSL 5 BASIC21.96■■□□□ 1.11
RAI1Q7Z5J4 TMEM114-202ENST00000568335 899 ntTSL 3 BASIC21.96■■□□□ 1.11
RAI1Q7Z5J4 COPZ2-210ENST00000621465 895 ntAPPRIS P1 TSL 1 (best) BASIC21.96■■□□□ 1.11
RAI1Q7Z5J4 TMEM55B-202ENST00000398020 1696 ntAPPRIS ALT1 TSL 1 (best) BASIC21.96■■□□□ 1.11
Retrieved 100 of 98,524 protein–RNA pairs in 10 ms