Protein–RNA interactions for Protein: Q6ZV77

C9orf139, Uncharacterized protein C9orf139, humanhuman

Predictions only

Length 190 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
C9orf139Q6ZV77 NME2-205ENST00000512737 826 ntAPPRIS P1 TSL 1 (best) BASIC20.85■□□□□ 0.93
C9orf139Q6ZV77 GSX2-202ENST00000503800 1181 ntTSL 5 BASIC20.84■□□□□ 0.93
C9orf139Q6ZV77 NPC2-207ENST00000555619 1035 ntAPPRIS P2 TSL 1 (best) BASIC20.84■□□□□ 0.93
C9orf139Q6ZV77 LINC01896-206ENST00000575722 1256 ntTSL 2 BASIC20.84■□□□□ 0.93
C9orf139Q6ZV77 WHAMMP2-203ENST00000563942 1603 ntBASIC20.84■□□□□ 0.93
C9orf139Q6ZV77 KLHL35-204ENST00000539798 1936 ntAPPRIS P1 TSL 1 (best) BASIC20.84■□□□□ 0.93
C9orf139Q6ZV77 MKNK2-202ENST00000309340 1744 ntAPPRIS ALT2 TSL 1 (best) BASIC20.84■□□□□ 0.93
C9orf139Q6ZV77 SLC15A4-201ENST00000266771 2779 ntAPPRIS P1 TSL 1 (best) BASIC20.83■□□□□ 0.93
C9orf139Q6ZV77 C1QTNF8-201ENST00000328449 1627 ntAPPRIS P1 TSL 5 BASIC20.83■□□□□ 0.93
C9orf139Q6ZV77 PAPD7-201ENST00000230859 5459 ntTSL 1 (best) BASIC20.82■□□□□ 0.92
C9orf139Q6ZV77 C16orf59-202ENST00000483320 1709 ntAPPRIS ALT2 TSL 2 BASIC20.82■□□□□ 0.92
C9orf139Q6ZV77 RAMP2-AS1-202ENST00000589716 1985 ntTSL 5 BASIC20.81■□□□□ 0.92
C9orf139Q6ZV77 MARCKSL1-201ENST00000329421 1699 ntAPPRIS P1 TSL 1 (best) BASIC20.81■□□□□ 0.92
C9orf139Q6ZV77 TPT1-202ENST00000379055 948 ntTSL 2 BASIC20.81■□□□□ 0.92
C9orf139Q6ZV77 TSPAN4-207ENST00000397411 1025 ntAPPRIS P1 TSL 2 BASIC20.81■□□□□ 0.92
C9orf139Q6ZV77 AC068134.2-201ENST00000437095 576 ntTSL 3 BASIC20.81■□□□□ 0.92
C9orf139Q6ZV77 CBX4-201ENST00000269397 2664 ntAPPRIS P2 TSL 1 (best) BASIC20.81■□□□□ 0.92
C9orf139Q6ZV77 HOXD8-201ENST00000313173 1917 ntAPPRIS P3 TSL 2 BASIC20.8■□□□□ 0.92
C9orf139Q6ZV77 BAX-202ENST00000345358 793 ntAPPRIS P1 TSL 1 (best) BASIC20.8■□□□□ 0.92
C9orf139Q6ZV77 FAM168B-201ENST00000389915 944 ntAPPRIS P1 TSL 3 BASIC20.8■□□□□ 0.92
C9orf139Q6ZV77 RBPMS-209ENST00000520161 842 ntTSL 2 BASIC20.8■□□□□ 0.92
C9orf139Q6ZV77 C16orf74-204ENST00000602719 1002 ntAPPRIS ALT2 TSL 3 BASIC20.8■□□□□ 0.92
C9orf139Q6ZV77 RUNX2-211ENST00000625924 1458 ntAPPRIS ALT2 TSL 1 (best) BASIC20.8■□□□□ 0.92
C9orf139Q6ZV77 TRIOBP-205ENST00000407319 2125 ntAPPRIS P3 TSL 1 (best) BASIC20.8■□□□□ 0.92
C9orf139Q6ZV77 ATPAF1-202ENST00000371937 1827 ntAPPRIS P1 TSL 1 (best) BASIC20.79■□□□□ 0.92
C9orf139Q6ZV77 MAP3K8-203ENST00000375322 932 ntTSL 2 BASIC20.79■□□□□ 0.92
C9orf139Q6ZV77 NKX2-1-204ENST00000522719 1417 ntAPPRIS P1 TSL 1 (best) BASIC20.78■□□□□ 0.92
C9orf139Q6ZV77 EIF5A-202ENST00000336458 1511 ntAPPRIS P1 TSL 1 (best) BASIC20.78■□□□□ 0.92
C9orf139Q6ZV77 TSPAN3-203ENST00000424443 1530 ntTSL 2 BASIC20.78■□□□□ 0.92
C9orf139Q6ZV77 ZBTB25-202ENST00000555220 1440 ntTSL 1 (best) BASIC20.78■□□□□ 0.92
C9orf139Q6ZV77 GPX1-201ENST00000419349 1106 ntBASIC20.77■□□□□ 0.92
C9orf139Q6ZV77 BOK-AS1-201ENST00000434306 643 ntTSL 1 (best) BASIC20.77■□□□□ 0.92
C9orf139Q6ZV77 BLOC1S3-202ENST00000587722 732 ntAPPRIS P1 BASIC20.77■□□□□ 0.92
C9orf139Q6ZV77 UBAC1-201ENST00000371756 1867 ntAPPRIS P1 TSL 1 (best) BASIC20.76■□□□□ 0.91
C9orf139Q6ZV77 PKIG-207ENST00000372894 1191 ntAPPRIS P1 TSL 1 (best) BASIC20.76■□□□□ 0.91
C9orf139Q6ZV77 RARRES2P2-201ENST00000394842 485 ntBASIC20.76■□□□□ 0.91
C9orf139Q6ZV77 U2AF1-203ENST00000398137 1019 ntTSL 1 (best) BASIC20.76■□□□□ 0.91
C9orf139Q6ZV77 U2AF1L5-212ENST00000639996 1019 ntTSL 1 (best) BASIC20.76■□□□□ 0.91
C9orf139Q6ZV77 RUNX2-205ENST00000465038 1770 ntAPPRIS P4 TSL 5 BASIC20.76■□□□□ 0.91
C9orf139Q6ZV77 PIP4K2B-204ENST00000619039 5734 ntAPPRIS P1 TSL 1 (best) BASIC20.76■□□□□ 0.91
C9orf139Q6ZV77 CBLN1-201ENST00000219197 2435 ntAPPRIS P1 TSL 1 (best) BASIC20.75■□□□□ 0.91
C9orf139Q6ZV77 BANF1-208ENST00000533166 1135 ntAPPRIS P1 TSL 2 BASIC20.75■□□□□ 0.91
C9orf139Q6ZV77 MAPK8IP1P1-201ENST00000574657 1439 ntBASIC20.75■□□□□ 0.91
C9orf139Q6ZV77 RNF126P1-201ENST00000567452 1320 ntBASIC20.75■□□□□ 0.91
C9orf139Q6ZV77 HSD11B1L-202ENST00000339423 1660 ntAPPRIS P3 TSL 1 (best) BASIC20.74■□□□□ 0.91
C9orf139Q6ZV77 AC007383.2-202ENST00000435627 482 ntTSL 2 BASIC20.74■□□□□ 0.91
C9orf139Q6ZV77 AC018755.3-201ENST00000598755 664 ntTSL 2 BASIC20.74■□□□□ 0.91
C9orf139Q6ZV77 AC110285.7-201ENST00000624417 1536 ntBASIC20.73■□□□□ 0.91
C9orf139Q6ZV77 IGFBPL1-201ENST00000377694 1093 ntAPPRIS P1 TSL 2 BASIC20.73■□□□□ 0.91
C9orf139Q6ZV77 PTPMT1-203ENST00000426530 1014 ntTSL 1 (best) BASIC20.73■□□□□ 0.91
C9orf139Q6ZV77 LINC01918-201ENST00000436841 797 ntTSL 2 BASIC20.73■□□□□ 0.91
C9orf139Q6ZV77 GNAI2-202ENST00000313601 2464 ntAPPRIS P1 TSL 1 (best) BASIC20.73■□□□□ 0.91
C9orf139Q6ZV77 SH3GL3-202ENST00000427482 1806 ntAPPRIS P1 TSL 1 (best) BASIC20.73■□□□□ 0.91
C9orf139Q6ZV77 CBWD5-202ENST00000377384 1347 ntTSL 1 (best) BASIC20.73■□□□□ 0.91
C9orf139Q6ZV77 LSM7-201ENST00000252622 529 ntAPPRIS P1 TSL 1 (best) BASIC20.72■□□□□ 0.91
C9orf139Q6ZV77 HSD17B12-202ENST00000395700 994 ntTSL 1 (best) BASIC20.72■□□□□ 0.91
C9orf139Q6ZV77 MORF4L1-203ENST00000426013 1880 ntAPPRIS P1 TSL 1 (best) BASIC20.72■□□□□ 0.91
C9orf139Q6ZV77 TAF10-201ENST00000299424 1215 ntAPPRIS P1 TSL 1 (best) BASIC20.71■□□□□ 0.91
C9orf139Q6ZV77 C1orf122-201ENST00000373042 973 ntAPPRIS P3 TSL 1 (best) BASIC20.71■□□□□ 0.91
C9orf139Q6ZV77 RPARP-AS1-205ENST00000596045 431 ntTSL 3 BASIC20.71■□□□□ 0.91
C9orf139Q6ZV77 AC148477.6-201ENST00000623746 465 ntBASIC20.71■□□□□ 0.91
C9orf139Q6ZV77 ARMC10-211ENST00000541300 2266 ntTSL 1 (best) BASIC20.71■□□□□ 0.91
C9orf139Q6ZV77 MEST-211ENST00000437945 1455 ntTSL 5 BASIC20.7■□□□□ 0.9
C9orf139Q6ZV77 AGAP3-211ENST00000473312 2039 ntTSL 1 (best) BASIC20.7■□□□□ 0.9
C9orf139Q6ZV77 HNRNPAB-202ENST00000358344 1796 ntAPPRIS P4 TSL 1 (best) BASIC20.7■□□□□ 0.9
C9orf139Q6ZV77 RPS2-210ENST00000530225 765 ntTSL 2 BASIC20.7■□□□□ 0.9
C9orf139Q6ZV77 CHST11-203ENST00000547956 936 ntTSL 2 BASIC20.7■□□□□ 0.9
C9orf139Q6ZV77 SHC2-201ENST00000264554 2494 ntAPPRIS P1 TSL 1 (best) BASIC20.7■□□□□ 0.9
C9orf139Q6ZV77 GXYLT1-201ENST00000280876 1937 ntAPPRIS ALT2 TSL 1 (best) BASIC20.7■□□□□ 0.9
C9orf139Q6ZV77 SLC12A2-202ENST00000343225 5509 ntAPPRIS ALT2 TSL 1 (best) BASIC20.69■□□□□ 0.9
C9orf139Q6ZV77 MKRN1-202ENST00000443720 1601 ntAPPRIS ALT2 TSL 1 (best) BASIC20.69■□□□□ 0.9
C9orf139Q6ZV77 PDF-201ENST00000288022 1158 ntAPPRIS P1 TSL 1 (best) BASIC20.69■□□□□ 0.9
C9orf139Q6ZV77 LAGE3-201ENST00000357360 949 ntAPPRIS P1 TSL 1 (best) BASIC20.69■□□□□ 0.9
C9orf139Q6ZV77 HES4-202ENST00000428771 1040 ntTSL 2 BASIC20.69■□□□□ 0.9
C9orf139Q6ZV77 CEP120-209ENST00000515110 606 ntTSL 3 BASIC20.69■□□□□ 0.9
C9orf139Q6ZV77 TSR3-201ENST00000007390 1243 ntAPPRIS P1 TSL 1 (best) BASIC20.69■□□□□ 0.9
C9orf139Q6ZV77 TMEM55B-202ENST00000398020 1696 ntAPPRIS ALT1 TSL 1 (best) BASIC20.69■□□□□ 0.9
C9orf139Q6ZV77 CAPNS1-201ENST00000246533 1918 ntAPPRIS P2 TSL 1 (best) BASIC20.68■□□□□ 0.9
C9orf139Q6ZV77 BCL7C-201ENST00000215115 1740 ntAPPRIS P1 TSL 1 (best) BASIC20.68■□□□□ 0.9
C9orf139Q6ZV77 MDFIC-203ENST00000423503 474 ntTSL 1 (best) BASIC20.68■□□□□ 0.9
C9orf139Q6ZV77 ABHD17AP5-201ENST00000580133 923 ntBASIC20.68■□□□□ 0.9
C9orf139Q6ZV77 COPZ2-210ENST00000621465 895 ntAPPRIS P1 TSL 1 (best) BASIC20.68■□□□□ 0.9
C9orf139Q6ZV77 AC078883.1-202ENST00000450443 1397 ntTSL 3 BASIC20.68■□□□□ 0.9
C9orf139Q6ZV77 RDX-210ENST00000530301 1549 ntTSL 1 (best) BASIC20.68■□□□□ 0.9
C9orf139Q6ZV77 SLC35D2-201ENST00000253270 1613 ntAPPRIS P1 TSL 1 (best) BASIC20.67■□□□□ 0.9
C9orf139Q6ZV77 ZNF470-206ENST00000601902 1640 ntTSL 1 (best) BASIC20.67■□□□□ 0.9
C9orf139Q6ZV77 RASL10A-202ENST00000401450 1720 ntTSL 2 BASIC20.67■□□□□ 0.9
C9orf139Q6ZV77 TMEM158-201ENST00000503771 1813 ntAPPRIS P1 BASIC20.67■□□□□ 0.9
C9orf139Q6ZV77 ZNF787-203ENST00000610935 1925 ntAPPRIS P1 TSL 1 (best) BASIC20.67■□□□□ 0.9
C9orf139Q6ZV77 AGO3-204ENST00000397828 1035 ntTSL 2 BASIC20.67■□□□□ 0.9
C9orf139Q6ZV77 TXNL4A-208ENST00000588162 752 ntTSL 2 BASIC20.67■□□□□ 0.9
C9orf139Q6ZV77 NRXN1-228ENST00000628364 2444 ntTSL 5 BASIC20.67■□□□□ 0.9
C9orf139Q6ZV77 PLEKHF2-202ENST00000519516 1144 ntAPPRIS P1 TSL 3 BASIC20.66■□□□□ 0.9
C9orf139Q6ZV77 AC022413.1-201ENST00000624602 984 ntBASIC20.66■□□□□ 0.9
C9orf139Q6ZV77 C14orf80-203ENST00000354560 1553 ntAPPRIS ALT2 TSL 1 (best) BASIC20.66■□□□□ 0.9
C9orf139Q6ZV77 HOMER3-202ENST00000392351 1557 ntAPPRIS P3 TSL 1 (best) BASIC20.66■□□□□ 0.9
C9orf139Q6ZV77 PHF23-201ENST00000320316 2037 ntAPPRIS P1 TSL 1 (best) BASIC20.65■□□□□ 0.9
C9orf139Q6ZV77 SHOX2-204ENST00000483851 1866 ntAPPRIS ALT2 TSL 2 BASIC20.65■□□□□ 0.9
C9orf139Q6ZV77 ITPKA-201ENST00000260386 1824 ntAPPRIS P1 TSL 1 (best) BASIC20.65■□□□□ 0.9
C9orf139Q6ZV77 KIF13A-207ENST00000502704 1330 ntTSL 1 (best) BASIC20.65■□□□□ 0.9
Retrieved 100 of 98,524 protein–RNA pairs in 98.3 ms