Protein–RNA interactions for Protein: Q68DV7

RNF43, E3 ubiquitin-protein ligase RNF43, humanhuman

Predictions only

Length 783 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RNF43Q68DV7 BARX1-201ENST00000253968 1533 ntAPPRIS P1 TSL 1 (best) BASIC26.8■■□□□ 1.88
RNF43Q68DV7 JMJD8-202ENST00000562111 823 ntTSL 2 BASIC26.79■■□□□ 1.88
RNF43Q68DV7 COQ2-202ENST00000311469 1641 ntAPPRIS P2 TSL 1 (best) BASIC26.79■■□□□ 1.88
RNF43Q68DV7 RAB40C-201ENST00000248139 2699 ntAPPRIS P1 TSL 1 (best) BASIC26.78■■□□□ 1.88
RNF43Q68DV7 ZNF513-201ENST00000323703 2139 ntAPPRIS P1 TSL 1 (best) BASIC26.78■■□□□ 1.88
RNF43Q68DV7 TSPOAP1-AS1-203ENST00000579527 2042 ntTSL 2 BASIC26.77■■□□□ 1.88
RNF43Q68DV7 LINC00273-201ENST00000539813 1452 ntBASIC26.77■■□□□ 1.88
RNF43Q68DV7 TCFL5-201ENST00000217162 2453 ntAPPRIS ALT2 TSL 1 (best) BASIC26.77■■□□□ 1.88
RNF43Q68DV7 TCFL5-202ENST00000335351 2456 ntAPPRIS P2 TSL 1 (best) BASIC26.77■■□□□ 1.88
RNF43Q68DV7 FAM189B-210ENST00000621094 1335 ntTSL 1 (best) BASIC26.76■■□□□ 1.87
RNF43Q68DV7 DUX4L11-201ENST00000611504 1267 ntBASIC26.76■■□□□ 1.87
RNF43Q68DV7 DUX4L12-201ENST00000614593 1267 ntBASIC26.76■■□□□ 1.87
RNF43Q68DV7 DUX4L14-201ENST00000621227 1267 ntBASIC26.76■■□□□ 1.87
RNF43Q68DV7 CLEC3B-202ENST00000428034 752 ntTSL 2 BASIC26.75■■□□□ 1.87
RNF43Q68DV7 GRK6-206ENST00000507633 1660 ntTSL 5 BASIC26.75■■□□□ 1.87
RNF43Q68DV7 IL17D-201ENST00000304920 1861 ntAPPRIS P1 TSL 1 (best) BASIC26.74■■□□□ 1.87
RNF43Q68DV7 ARHGAP22-202ENST00000374170 2107 ntTSL 5 BASIC26.74■■□□□ 1.87
RNF43Q68DV7 PDPK1-203ENST00000389224 2416 ntTSL 2 BASIC26.74■■□□□ 1.87
RNF43Q68DV7 CLDND1-226ENST00000513287 999 ntAPPRIS P1 TSL 2 BASIC26.73■■□□□ 1.87
RNF43Q68DV7 TRIM52-AS1-203ENST00000509252 529 ntTSL 3 BASIC26.72■■□□□ 1.87
RNF43Q68DV7 FKBP1A-210ENST00000614856 562 ntTSL 2 BASIC26.72■■□□□ 1.87
RNF43Q68DV7 TOMM40-201ENST00000252487 1707 ntAPPRIS P2 TSL 1 (best) BASIC26.72■■□□□ 1.87
RNF43Q68DV7 TOMM40-202ENST00000405636 1709 ntAPPRIS P2 TSL 1 (best) BASIC26.72■■□□□ 1.87
RNF43Q68DV7 FSD1L-208ENST00000495708 1906 ntTSL 1 (best) BASIC26.72■■□□□ 1.87
RNF43Q68DV7 HNRNPAB-205ENST00000506259 1674 ntAPPRIS ALT2 TSL 1 (best) BASIC26.72■■□□□ 1.87
RNF43Q68DV7 TMEM251-202ENST00000415050 1303 ntTSL 2 BASIC26.71■■□□□ 1.87
RNF43Q68DV7 AC127502.1-201ENST00000399971 1502 ntBASIC26.71■■□□□ 1.87
RNF43Q68DV7 PICK1-201ENST00000356976 2055 ntAPPRIS P1 TSL 1 (best) BASIC26.71■■□□□ 1.87
RNF43Q68DV7 CCDC88C-205ENST00000553403 1651 ntTSL 1 (best) BASIC26.71■■□□□ 1.87
RNF43Q68DV7 AP003068.2-202ENST00000526623 1662 ntTSL 2 BASIC26.7■■□□□ 1.87
RNF43Q68DV7 C9orf40-201ENST00000376854 2327 ntAPPRIS P1 TSL 1 (best) BASIC26.7■■□□□ 1.86
RNF43Q68DV7 AGPS-202ENST00000409888 815 ntTSL 4 BASIC26.7■■□□□ 1.86
RNF43Q68DV7 SLC35D2-203ENST00000375259 1361 ntTSL 1 (best) BASIC26.7■■□□□ 1.86
RNF43Q68DV7 ATPAF1-202ENST00000371937 1827 ntAPPRIS P1 TSL 1 (best) BASIC26.69■■□□□ 1.86
RNF43Q68DV7 HNRNPAB-202ENST00000358344 1796 ntAPPRIS P4 TSL 1 (best) BASIC26.69■■□□□ 1.86
RNF43Q68DV7 HSD17B1-201ENST00000225929 1265 ntAPPRIS ALT2 TSL 2 BASIC26.69■■□□□ 1.86
RNF43Q68DV7 GADD45G-201ENST00000252506 1065 ntAPPRIS P1 TSL 1 (best) BASIC26.69■■□□□ 1.86
RNF43Q68DV7 MKNK2-202ENST00000309340 1744 ntAPPRIS ALT2 TSL 1 (best) BASIC26.69■■□□□ 1.86
RNF43Q68DV7 SP8-201ENST00000361443 1714 ntAPPRIS P3 TSL 1 (best) BASIC26.69■■□□□ 1.86
RNF43Q68DV7 LDB1-202ENST00000425280 2089 ntTSL 5 BASIC26.69■■□□□ 1.86
RNF43Q68DV7 RHOC-202ENST00000339083 1418 ntAPPRIS P1 TSL 1 (best) BASIC26.68■■□□□ 1.86
RNF43Q68DV7 ABHD17AP3-201ENST00000503096 1137 ntBASIC26.68■■□□□ 1.86
RNF43Q68DV7 CR559946.2-201ENST00000623684 991 ntBASIC26.68■■□□□ 1.86
RNF43Q68DV7 ST7-AS1-201ENST00000456775 1889 ntBASIC26.68■■□□□ 1.86
RNF43Q68DV7 ST6GALNAC6-205ENST00000373146 2460 ntAPPRIS P3 TSL 1 (best) BASIC26.67■■□□□ 1.86
RNF43Q68DV7 ARL8A-201ENST00000272217 1793 ntAPPRIS P1 TSL 1 (best) BASIC26.67■■□□□ 1.86
RNF43Q68DV7 CFAP73-201ENST00000335621 1514 ntAPPRIS P1 TSL 5 BASIC26.67■■□□□ 1.86
RNF43Q68DV7 LINC02323-201ENST00000559946 1603 ntTSL 3 BASIC26.67■■□□□ 1.86
RNF43Q68DV7 MXI1-201ENST00000239007 2424 ntAPPRIS ALT1 TSL 1 (best) BASIC26.67■■□□□ 1.86
RNF43Q68DV7 AURKAIP1-203ENST00000338370 1072 ntAPPRIS P1 TSL 1 (best) BASIC26.66■■□□□ 1.86
RNF43Q68DV7 AP000251.1-201ENST00000433071 822 ntTSL 1 (best) BASIC26.66■■□□□ 1.86
RNF43Q68DV7 GAL3ST1-205ENST00000406361 1819 ntAPPRIS P1 TSL 2 BASIC26.66■■□□□ 1.86
RNF43Q68DV7 PLSCR3-214ENST00000619711 2066 ntTSL 5 BASIC26.66■■□□□ 1.86
RNF43Q68DV7 P2RX2-203ENST00000350048 1344 ntTSL 1 (best) BASIC26.65■■□□□ 1.86
RNF43Q68DV7 SIGMAR1-203ENST00000378892 1743 ntTSL 2 BASIC26.65■■□□□ 1.86
RNF43Q68DV7 PARD6A-201ENST00000219255 1248 ntAPPRIS P3 TSL 1 (best) BASIC26.65■■□□□ 1.86
RNF43Q68DV7 DUX4L13-201ENST00000554103 1267 ntBASIC26.65■■□□□ 1.86
RNF43Q68DV7 DUX4L15-201ENST00000611059 1267 ntBASIC26.65■■□□□ 1.86
RNF43Q68DV7 DUX4L23-201ENST00000615195 1269 ntBASIC26.65■■□□□ 1.86
RNF43Q68DV7 DUX4L24-201ENST00000617576 1269 ntBASIC26.65■■□□□ 1.86
RNF43Q68DV7 DUX4L22-201ENST00000618238 1269 ntBASIC26.65■■□□□ 1.86
RNF43Q68DV7 DUX4L20-201ENST00000619712 1269 ntBASIC26.65■■□□□ 1.86
RNF43Q68DV7 DUX4L21-201ENST00000622058 1269 ntBASIC26.65■■□□□ 1.86
RNF43Q68DV7 DUX4L10-201ENST00000622460 1267 ntBASIC26.65■■□□□ 1.86
RNF43Q68DV7 DUX4L25-201ENST00000624915 1269 ntBASIC26.65■■□□□ 1.86
RNF43Q68DV7 COL13A1-213ENST00000520267 2276 ntAPPRIS ALT2 TSL 5 BASIC26.64■■□□□ 1.86
RNF43Q68DV7 HOOK2-201ENST00000264827 2603 ntAPPRIS P1 TSL 1 (best) BASIC26.64■■□□□ 1.86
RNF43Q68DV7 FAAP20-202ENST00000378546 729 ntAPPRIS P1 TSL 1 (best) BASIC26.64■■□□□ 1.86
RNF43Q68DV7 AC231981.1-201ENST00000450917 974 ntTSL 3 BASIC26.64■■□□□ 1.86
RNF43Q68DV7 PLSCR3-209ENST00000574401 2032 ntAPPRIS P1 TSL 1 (best) BASIC26.64■■□□□ 1.86
RNF43Q68DV7 GKAP1-202ENST00000376365 1511 ntTSL 1 (best) BASIC26.64■■□□□ 1.85
RNF43Q68DV7 GABRA5-203ENST00000400081 2761 ntAPPRIS P1 TSL 5 BASIC26.63■■□□□ 1.85
RNF43Q68DV7 MAZ-208ENST00000563402 1461 ntTSL 5 BASIC26.63■■□□□ 1.85
RNF43Q68DV7 MAZ-210ENST00000566906 1455 ntTSL 5 BASIC26.63■■□□□ 1.85
RNF43Q68DV7 WHRN-203ENST00000374057 1718 ntTSL 2 BASIC26.63■■□□□ 1.85
RNF43Q68DV7 PPP4R4-202ENST00000328839 876 ntTSL 1 (best) BASIC26.63■■□□□ 1.85
RNF43Q68DV7 C5orf66-AS1-201ENST00000507035 843 ntTSL 2 BASIC26.63■■□□□ 1.85
RNF43Q68DV7 SLC52A2-201ENST00000329994 1896 ntAPPRIS P1 TSL 1 (best) BASIC26.63■■□□□ 1.85
RNF43Q68DV7 C11orf95-204ENST00000546282 390 ntTSL 3 BASIC26.62■■□□□ 1.85
RNF43Q68DV7 BMP7-204ENST00000450594 1857 ntTSL 2 BASIC26.62■■□□□ 1.85
RNF43Q68DV7 HOXB3-201ENST00000311626 2642 ntAPPRIS P1 TSL 1 (best) BASIC26.61■■□□□ 1.85
RNF43Q68DV7 RUNX2-205ENST00000465038 1770 ntAPPRIS P4 TSL 5 BASIC26.6■■□□□ 1.85
RNF43Q68DV7 ZNF775-201ENST00000329630 2257 ntAPPRIS P1 TSL 1 (best) BASIC26.6■■□□□ 1.85
RNF43Q68DV7 C11orf80-204ENST00000525908 2135 ntAPPRIS P3 TSL 2 BASIC26.6■■□□□ 1.85
RNF43Q68DV7 ING2-201ENST00000302327 1189 ntAPPRIS P1 TSL 1 (best) BASIC26.59■■□□□ 1.85
RNF43Q68DV7 TESK1-201ENST00000336395 2421 ntAPPRIS P1 TSL 1 (best) BASIC26.59■■□□□ 1.85
RNF43Q68DV7 RRNAD1-201ENST00000368216 2254 ntAPPRIS P3 TSL 1 (best) BASIC26.59■■□□□ 1.85
RNF43Q68DV7 BCL7C-201ENST00000215115 1740 ntAPPRIS P1 TSL 1 (best) BASIC26.59■■□□□ 1.85
RNF43Q68DV7 AC135983.2-203ENST00000454486 1613 ntBASIC26.58■■□□□ 1.85
RNF43Q68DV7 SHOX2-204ENST00000483851 1866 ntAPPRIS ALT2 TSL 2 BASIC26.58■■□□□ 1.85
RNF43Q68DV7 CHML-204ENST00000638121 920 ntTSL 2 BASIC26.58■■□□□ 1.85
RNF43Q68DV7 NPB-202ENST00000573081 2154 ntAPPRIS ALT2 BASIC26.58■■□□□ 1.85
RNF43Q68DV7 AC142086.6-201ENST00000621154 1765 ntBASIC26.58■■□□□ 1.85
RNF43Q68DV7 C1QTNF8-201ENST00000328449 1627 ntAPPRIS P1 TSL 5 BASIC26.57■■□□□ 1.84
RNF43Q68DV7 EFNA3-201ENST00000368408 1782 ntAPPRIS P1 TSL 1 (best) BASIC26.57■■□□□ 1.84
RNF43Q68DV7 EBPL-201ENST00000242827 914 ntAPPRIS P1 TSL 1 (best) BASIC26.57■■□□□ 1.84
RNF43Q68DV7 CAAP1-205ENST00000520187 773 ntTSL 5 BASIC26.57■■□□□ 1.84
RNF43Q68DV7 AP000911.3-201ENST00000526377 1130 ntTSL 3 BASIC26.57■■□□□ 1.84
RNF43Q68DV7 EIF5A-208ENST00000573542 1089 ntAPPRIS P1 TSL 2 BASIC26.57■■□□□ 1.84
RNF43Q68DV7 DPF1-202ENST00000412732 2303 ntTSL 1 (best) BASIC26.56■■□□□ 1.84
Retrieved 100 of 98,524 protein–RNA pairs in 11.8 ms