Protein–RNA interactions for Protein: Q5TAT6

COL13A1, Collagen alpha-1(XIII) chain, humanhuman

Predicted RBP Predictions only

Length 717 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
COL13A1Q5TAT6 LAGE3-201ENST00000357360 949 ntAPPRIS P1 TSL 1 (best) BASIC30.31■■■□□ 2.44
COL13A1Q5TAT6 PTRH1-208ENST00000543175 814 ntAPPRIS P1 TSL 1 (best) BASIC30.31■■■□□ 2.44
COL13A1Q5TAT6 AC073934.1-201ENST00000490314 495 ntTSL 4 BASIC30.3■■■□□ 2.44
COL13A1Q5TAT6 LRMDA-215ENST00000611255 1040 ntAPPRIS ALT2 TSL 5 BASIC30.3■■■□□ 2.44
COL13A1Q5TAT6 HSPB6-202ENST00000587965 711 ntTSL 2 BASIC30.28■■■□□ 2.44
COL13A1Q5TAT6 PAOX-206ENST00000480071 1324 ntTSL 1 (best) BASIC30.27■■■□□ 2.44
COL13A1Q5TAT6 AC053527.1-201ENST00000502790 685 ntTSL 3 BASIC30.27■■■□□ 2.44
COL13A1Q5TAT6 TMEM165-204ENST00000506198 828 ntTSL 2 BASIC30.27■■■□□ 2.44
COL13A1Q5TAT6 UBE2I-213ENST00000566587 1098 ntAPPRIS P1 TSL 2 BASIC30.27■■■□□ 2.44
COL13A1Q5TAT6 CAPNS1-205ENST00000588780 1035 ntAPPRIS ALT2 TSL 5 BASIC30.27■■■□□ 2.44
COL13A1Q5TAT6 KCNQ5-204ENST00000370392 1469 ntTSL 1 (best) BASIC30.26■■■□□ 2.44
COL13A1Q5TAT6 CENPX-202ENST00000392359 805 ntAPPRIS P1 TSL 2 BASIC30.26■■■□□ 2.43
COL13A1Q5TAT6 RP9P-202ENST00000450133 1212 ntBASIC30.26■■■□□ 2.43
COL13A1Q5TAT6 KRT8P33-201ENST00000508125 1423 ntBASIC30.26■■■□□ 2.43
COL13A1Q5TAT6 ZEB1-AS1-205ENST00000605946 382 ntTSL 5 BASIC30.26■■■□□ 2.43
COL13A1Q5TAT6 OPRD1-202ENST00000621425 1217 ntTSL 1 (best) BASIC30.26■■■□□ 2.43
COL13A1Q5TAT6 FEZF2-201ENST00000283268 2074 ntAPPRIS P1 TSL 1 (best) BASIC30.26■■■□□ 2.43
COL13A1Q5TAT6 EIF5A-211ENST00000576930 1439 ntAPPRIS P1 TSL 5 BASIC30.25■■■□□ 2.43
COL13A1Q5TAT6 LYPD6B-204ENST00000409876 1248 ntAPPRIS ALT2 TSL 1 (best) BASIC30.24■■■□□ 2.43
COL13A1Q5TAT6 TTC39C-209ENST00000584250 1048 ntTSL 1 (best) BASIC30.24■■■□□ 2.43
COL13A1Q5TAT6 SERINC2-201ENST00000373709 1997 ntAPPRIS P1 TSL 1 (best) BASIC30.24■■■□□ 2.43
COL13A1Q5TAT6 AC078883.1-202ENST00000450443 1397 ntTSL 3 BASIC30.24■■■□□ 2.43
COL13A1Q5TAT6 PKIG-206ENST00000372892 1338 ntAPPRIS P1 TSL 2 BASIC30.23■■■□□ 2.43
COL13A1Q5TAT6 ERFE-207ENST00000546354 1065 ntAPPRIS P2 TSL 1 (best) BASIC30.23■■■□□ 2.43
COL13A1Q5TAT6 ATP6V1E2-204ENST00000522587 1559 ntAPPRIS P1 TSL 3 BASIC30.22■■■□□ 2.43
COL13A1Q5TAT6 MAPK3-202ENST00000322266 1743 ntTSL 5 BASIC30.21■■■□□ 2.43
COL13A1Q5TAT6 TPI1-210ENST00000613953 1460 ntTSL 1 (best) BASIC30.2■■■□□ 2.43
COL13A1Q5TAT6 HAUS7-211ENST00000626181 414 ntAPPRIS ALT2 TSL 5 BASIC30.2■■■□□ 2.43
COL13A1Q5TAT6 ATOH7-201ENST00000373673 1480 ntAPPRIS P1 BASIC30.19■■■□□ 2.42
COL13A1Q5TAT6 LY6H-201ENST00000342752 951 ntAPPRIS ALT2 TSL 1 (best) BASIC30.19■■■□□ 2.42
COL13A1Q5TAT6 LY6H-202ENST00000414417 1056 ntAPPRIS ALT2 TSL 1 (best) BASIC30.19■■■□□ 2.42
COL13A1Q5TAT6 LY6H-203ENST00000430474 925 ntAPPRIS P3 TSL 3 BASIC30.19■■■□□ 2.42
COL13A1Q5TAT6 HIST1H2AL-201ENST00000613174 393 ntAPPRIS P1 BASIC30.19■■■□□ 2.42
COL13A1Q5TAT6 SMARCD3-201ENST00000262188 1993 ntAPPRIS P1 TSL 1 (best) BASIC30.19■■■□□ 2.42
COL13A1Q5TAT6 LINC02323-201ENST00000559946 1603 ntTSL 3 BASIC30.18■■■□□ 2.42
COL13A1Q5TAT6 PEMT-206ENST00000435340 960 ntTSL 5 BASIC30.17■■■□□ 2.42
COL13A1Q5TAT6 HAPLN2-201ENST00000255039 1771 ntAPPRIS P1 TSL 1 (best) BASIC30.17■■■□□ 2.42
COL13A1Q5TAT6 FEZ1-205ENST00000524435 750 ntTSL 2 BASIC30.16■■■□□ 2.42
COL13A1Q5TAT6 TSPAN4-207ENST00000397411 1025 ntAPPRIS P1 TSL 2 BASIC30.15■■■□□ 2.42
COL13A1Q5TAT6 FAM149A-205ENST00000502970 1990 ntAPPRIS P2 TSL 5 BASIC30.15■■■□□ 2.42
COL13A1Q5TAT6 TMEM251-202ENST00000415050 1303 ntTSL 2 BASIC30.14■■■□□ 2.42
COL13A1Q5TAT6 CGREF1-202ENST00000312734 1610 ntAPPRIS P2 TSL 5 BASIC30.14■■■□□ 2.41
COL13A1Q5TAT6 C9orf147-202ENST00000457681 561 ntTSL 2 BASIC30.13■■■□□ 2.41
COL13A1Q5TAT6 ZNF302-211ENST00000509528 577 ntTSL 4 BASIC30.12■■■□□ 2.41
COL13A1Q5TAT6 CDKN3-207ENST00000543789 610 ntTSL 5 BASIC30.11■■■□□ 2.41
COL13A1Q5TAT6 CDKN2A-214ENST00000579755 1283 ntAPPRIS P1 TSL 1 (best) BASIC30.11■■■□□ 2.41
COL13A1Q5TAT6 AC010980.1-201ENST00000587192 1142 ntBASIC30.11■■■□□ 2.41
COL13A1Q5TAT6 AC092296.2-201ENST00000589470 999 ntBASIC30.11■■■□□ 2.41
COL13A1Q5TAT6 COPZ2-210ENST00000621465 895 ntAPPRIS P1 TSL 1 (best) BASIC30.11■■■□□ 2.41
COL13A1Q5TAT6 RSPO4-202ENST00000400634 722 ntTSL 1 (best) BASIC30.1■■■□□ 2.41
COL13A1Q5TAT6 FOXO6-202ENST00000641094 1476 ntAPPRIS P1 BASIC30.1■■■□□ 2.41
COL13A1Q5TAT6 CMPK2-203ENST00000458098 1224 ntTSL 1 (best) BASIC30.09■■■□□ 2.41
COL13A1Q5TAT6 UBALD1-201ENST00000283474 1413 ntAPPRIS P1 TSL 1 (best) BASIC30.08■■■□□ 2.41
COL13A1Q5TAT6 CHPT1-201ENST00000229266 1585 ntAPPRIS P2 TSL 1 (best) BASIC30.07■■■□□ 2.4
COL13A1Q5TAT6 GNG10-201ENST00000374293 1491 ntAPPRIS P1 TSL 1 (best) BASIC30.07■■■□□ 2.4
COL13A1Q5TAT6 SPCS2P3-201ENST00000500401 656 ntBASIC30.07■■■□□ 2.4
COL13A1Q5TAT6 GALK1-205ENST00000588479 1866 ntAPPRIS P1 TSL 1 (best) BASIC30.07■■■□□ 2.4
COL13A1Q5TAT6 UBALD1-206ENST00000590965 1462 ntTSL 2 BASIC30.06■■■□□ 2.4
COL13A1Q5TAT6 EVA1B-201ENST00000270824 1054 ntAPPRIS P1 TSL 2 BASIC30.06■■■□□ 2.4
COL13A1Q5TAT6 AC064853.2-201ENST00000641246 144 ntAPPRIS P1 BASIC30.06■■■□□ 2.4
COL13A1Q5TAT6 MAZ-208ENST00000563402 1461 ntTSL 5 BASIC30.06■■■□□ 2.4
COL13A1Q5TAT6 MAZ-210ENST00000566906 1455 ntTSL 5 BASIC30.06■■■□□ 2.4
COL13A1Q5TAT6 FOXB2-201ENST00000376708 1299 ntAPPRIS P1 BASIC30.05■■■□□ 2.4
COL13A1Q5TAT6 HM13-AS1-201ENST00000412178 489 ntTSL 3 BASIC30.05■■■□□ 2.4
COL13A1Q5TAT6 AL592293.1-201ENST00000502889 1188 ntBASIC30.05■■■□□ 2.4
COL13A1Q5TAT6 MPST-201ENST00000341116 1504 ntAPPRIS P1 TSL 5 BASIC30.05■■■□□ 2.4
COL13A1Q5TAT6 BRF1-221ENST00000619151 1530 ntTSL 5 BASIC30.05■■■□□ 2.4
COL13A1Q5TAT6 TBX2-AS1-202ENST00000589814 539 ntTSL 3 BASIC30.04■■■□□ 2.4
COL13A1Q5TAT6 LMO2-202ENST00000395833 1687 ntAPPRIS P1 TSL 1 (best) BASIC30.04■■■□□ 2.4
COL13A1Q5TAT6 BHLHE23-202ENST00000612929 1109 ntBASIC30.03■■■□□ 2.4
COL13A1Q5TAT6 RALB-208ENST00000631312 311 ntTSL 5 BASIC30.03■■■□□ 2.4
COL13A1Q5TAT6 NOXA1-201ENST00000341349 1678 ntAPPRIS P1 TSL 1 (best) BASIC30.03■■■□□ 2.4
COL13A1Q5TAT6 CRIP2-201ENST00000329146 1857 ntAPPRIS P1 TSL 1 (best) BASIC30.03■■■□□ 2.4
COL13A1Q5TAT6 CD63-201ENST00000257857 1070 ntAPPRIS P1 TSL 1 (best) BASIC30.02■■■□□ 2.4
COL13A1Q5TAT6 MOSPD3-204ENST00000424091 1115 ntTSL 1 (best) BASIC30.02■■■□□ 2.4
COL13A1Q5TAT6 ECEL1P2-201ENST00000461596 1295 ntBASIC30.02■■■□□ 2.4
COL13A1Q5TAT6 LRP11-202ENST00000367368 1042 ntTSL 2 BASIC30.01■■■□□ 2.39
COL13A1Q5TAT6 NAXE-203ENST00000368235 1125 ntAPPRIS P1 TSL 1 (best) BASIC30■■■□□ 2.39
COL13A1Q5TAT6 AC116025.2-201ENST00000576632 443 ntTSL 3 BASIC30■■■□□ 2.39
COL13A1Q5TAT6 AC103834.1-201ENST00000520383 144 ntBASIC29.99■■■□□ 2.39
COL13A1Q5TAT6 AC009511.2-201ENST00000545904 679 ntTSL 2 BASIC29.99■■■□□ 2.39
COL13A1Q5TAT6 CHST11-203ENST00000547956 936 ntTSL 2 BASIC29.99■■■□□ 2.39
COL13A1Q5TAT6 PABPN1-207ENST00000556821 1220 ntTSL 2 BASIC29.99■■■□□ 2.39
COL13A1Q5TAT6 YBX1P4-201ENST00000392794 808 ntBASIC29.98■■■□□ 2.39
COL13A1Q5TAT6 QDPR-202ENST00000428702 1278 ntTSL 2 BASIC29.98■■■□□ 2.39
COL13A1Q5TAT6 ARL6IP4-208ENST00000439686 796 ntAPPRIS ALT2 TSL 3 BASIC29.98■■■□□ 2.39
COL13A1Q5TAT6 ARHGEF7-AS2-201ENST00000425094 1239 ntTSL 1 (best) BASIC29.97■■■□□ 2.39
COL13A1Q5TAT6 ZNF419-210ENST00000520540 568 ntTSL 4 BASIC29.97■■■□□ 2.39
COL13A1Q5TAT6 TRAPPC10-202ENST00000380221 1763 ntTSL 1 (best) BASIC29.97■■■□□ 2.39
COL13A1Q5TAT6 TPRG1L-201ENST00000344579 2189 ntTSL 1 (best) BASIC29.96■■■□□ 2.39
COL13A1Q5TAT6 PPP1R14A-205ENST00000591585 949 ntTSL 2 BASIC29.96■■■□□ 2.39
COL13A1Q5TAT6 TRAPPC5-202ENST00000426877 765 ntAPPRIS P1 TSL 2 BASIC29.95■■■□□ 2.39
COL13A1Q5TAT6 GPR137-202ENST00000377702 1478 ntTSL 1 (best) BASIC29.94■■■□□ 2.38
COL13A1Q5TAT6 TMEM147-202ENST00000392204 935 ntTSL 2 BASIC29.94■■■□□ 2.38
COL13A1Q5TAT6 SMDT1-201ENST00000331479 1567 ntAPPRIS P1 TSL 1 (best) BASIC29.94■■■□□ 2.38
COL13A1Q5TAT6 C14orf80-211ENST00000450383 1107 ntAPPRIS ALT2 TSL 5 BASIC29.93■■■□□ 2.38
COL13A1Q5TAT6 ACTR3B-202ENST00000377776 1566 ntTSL 1 (best) BASIC29.93■■■□□ 2.38
COL13A1Q5TAT6 KISS1-201ENST00000367194 709 ntAPPRIS P2 TSL 1 (best) BASIC29.92■■■□□ 2.38
COL13A1Q5TAT6 AL355490.1-201ENST00000445808 805 ntTSL 3 BASIC29.92■■■□□ 2.38
COL13A1Q5TAT6 AL139246.5-201ENST00000606645 996 ntBASIC29.92■■■□□ 2.38
Retrieved 100 of 98,524 protein–RNA pairs in 36.1 ms