Protein–RNA interactions for Protein: Q2KHR2

RFX7, DNA-binding protein RFX7, humanhuman

Predictions only

Length 1,363 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RFX7Q2KHR2 FKBP1A-210ENST00000614856 562 ntTSL 2 BASIC31.4■■■□□ 2.62
RFX7Q2KHR2 P2RX2-203ENST00000350048 1344 ntTSL 1 (best) BASIC31.39■■■□□ 2.62
RFX7Q2KHR2 ACOT7-201ENST00000361521 2429 ntAPPRIS ALT2 TSL 1 (best) BASIC31.38■■■□□ 2.61
RFX7Q2KHR2 TMEM268-201ENST00000288502 2314 ntAPPRIS P3 TSL 1 (best) BASIC31.37■■■□□ 2.61
RFX7Q2KHR2 CALM3-209ENST00000597743 577 ntTSL 4 BASIC31.37■■■□□ 2.61
RFX7Q2KHR2 AP004833.2-201ENST00000532228 1454 ntBASIC31.36■■■□□ 2.61
RFX7Q2KHR2 CENPV-201ENST00000299736 1165 ntAPPRIS P1 TSL 1 (best) BASIC31.36■■■□□ 2.61
RFX7Q2KHR2 TMEM251-202ENST00000415050 1303 ntTSL 2 BASIC31.35■■■□□ 2.61
RFX7Q2KHR2 MAPK13-201ENST00000211287 2052 ntAPPRIS P1 TSL 1 (best) BASIC31.35■■■□□ 2.61
RFX7Q2KHR2 TPRA1-202ENST00000355552 1933 ntAPPRIS P1 TSL 1 (best) BASIC31.35■■■□□ 2.61
RFX7Q2KHR2 CAAP1-205ENST00000520187 773 ntTSL 5 BASIC31.35■■■□□ 2.61
RFX7Q2KHR2 DUX4L13-201ENST00000554103 1267 ntBASIC31.35■■■□□ 2.61
RFX7Q2KHR2 DUX4L15-201ENST00000611059 1267 ntBASIC31.35■■■□□ 2.61
RFX7Q2KHR2 DUX4L23-201ENST00000615195 1269 ntBASIC31.35■■■□□ 2.61
RFX7Q2KHR2 DUX4L24-201ENST00000617576 1269 ntBASIC31.35■■■□□ 2.61
RFX7Q2KHR2 DUX4L22-201ENST00000618238 1269 ntBASIC31.35■■■□□ 2.61
RFX7Q2KHR2 DUX4L20-201ENST00000619712 1269 ntBASIC31.35■■■□□ 2.61
RFX7Q2KHR2 DUX4L21-201ENST00000622058 1269 ntBASIC31.35■■■□□ 2.61
RFX7Q2KHR2 DUX4L10-201ENST00000622460 1267 ntBASIC31.35■■■□□ 2.61
RFX7Q2KHR2 DUX4L25-201ENST00000624915 1269 ntBASIC31.35■■■□□ 2.61
RFX7Q2KHR2 RRAD-202ENST00000420652 1476 ntAPPRIS P1 TSL 1 (best) BASIC31.35■■■□□ 2.61
RFX7Q2KHR2 EBPL-201ENST00000242827 914 ntAPPRIS P1 TSL 1 (best) BASIC31.33■■■□□ 2.61
RFX7Q2KHR2 C11orf95-204ENST00000546282 390 ntTSL 3 BASIC31.33■■■□□ 2.61
RFX7Q2KHR2 MORF4L1-203ENST00000426013 1880 ntAPPRIS P1 TSL 1 (best) BASIC31.33■■■□□ 2.61
RFX7Q2KHR2 SMDT1-201ENST00000331479 1567 ntAPPRIS P1 TSL 1 (best) BASIC31.32■■■□□ 2.61
RFX7Q2KHR2 JMJD8-202ENST00000562111 823 ntTSL 2 BASIC31.31■■■□□ 2.6
RFX7Q2KHR2 PRELID2-207ENST00000511435 1894 ntAPPRIS ALT1 TSL 2 BASIC31.31■■■□□ 2.6
RFX7Q2KHR2 AP000251.1-201ENST00000433071 822 ntTSL 1 (best) BASIC31.3■■■□□ 2.6
RFX7Q2KHR2 TNFRSF25-204ENST00000356876 1625 ntAPPRIS ALT2 TSL 1 (best) BASIC31.3■■■□□ 2.6
RFX7Q2KHR2 SIGMAR1-203ENST00000378892 1743 ntTSL 2 BASIC31.29■■■□□ 2.6
RFX7Q2KHR2 SNX24-201ENST00000261369 2158 ntAPPRIS P1 TSL 1 (best) BASIC31.29■■■□□ 2.6
RFX7Q2KHR2 DTNBP1-212ENST00000622898 1305 ntTSL 1 (best) BASIC31.29■■■□□ 2.6
RFX7Q2KHR2 CCDC160-202ENST00000517294 1790 ntAPPRIS P1 TSL 5 BASIC31.29■■■□□ 2.6
RFX7Q2KHR2 BIN1-204ENST00000348750 2074 ntTSL 1 (best) BASIC31.29■■■□□ 2.6
RFX7Q2KHR2 U2AF1-201ENST00000291552 962 ntAPPRIS P3 TSL 1 (best) BASIC31.29■■■□□ 2.6
RFX7Q2KHR2 RANBP1-202ENST00000402752 1132 ntAPPRIS ALT1 TSL 1 (best) BASIC31.29■■■□□ 2.6
RFX7Q2KHR2 U2AF1L5-202ENST00000619610 813 ntAPPRIS ALT2 TSL 1 (best) BASIC31.29■■■□□ 2.6
RFX7Q2KHR2 TPI1-201ENST00000229270 1763 ntTSL 1 (best) BASIC31.29■■■□□ 2.6
RFX7Q2KHR2 SLC30A10-202ENST00000366926 1915 ntAPPRIS P1 TSL 1 (best) BASIC31.28■■■□□ 2.6
RFX7Q2KHR2 RTN4R-201ENST00000043402 2157 ntAPPRIS P2 TSL 1 (best) BASIC31.28■■■□□ 2.6
RFX7Q2KHR2 FAAP20-202ENST00000378546 729 ntAPPRIS P1 TSL 1 (best) BASIC31.28■■■□□ 2.6
RFX7Q2KHR2 LINC00273-201ENST00000539813 1452 ntBASIC31.28■■■□□ 2.6
RFX7Q2KHR2 SLC16A11-201ENST00000308009 1803 ntAPPRIS P2 TSL 1 (best) BASIC31.27■■■□□ 2.6
RFX7Q2KHR2 UBAC1-201ENST00000371756 1867 ntAPPRIS P1 TSL 1 (best) BASIC31.27■■■□□ 2.6
RFX7Q2KHR2 AC231981.1-201ENST00000450917 974 ntTSL 3 BASIC31.27■■■□□ 2.6
RFX7Q2KHR2 FAM189B-210ENST00000621094 1335 ntTSL 1 (best) BASIC31.27■■■□□ 2.6
RFX7Q2KHR2 VWA1-201ENST00000338660 2147 ntTSL 2 BASIC31.26■■■□□ 2.59
RFX7Q2KHR2 SECTM1-201ENST00000269389 2235 ntAPPRIS P2 TSL 1 (best) BASIC31.25■■■□□ 2.59
RFX7Q2KHR2 CLDND1-226ENST00000513287 999 ntAPPRIS P1 TSL 2 BASIC31.25■■■□□ 2.59
RFX7Q2KHR2 CHML-204ENST00000638121 920 ntTSL 2 BASIC31.24■■■□□ 2.59
RFX7Q2KHR2 FEV-201ENST00000295727 1879 ntAPPRIS P1 TSL 1 (best) BASIC31.24■■■□□ 2.59
RFX7Q2KHR2 PQLC1-202ENST00000357575 2475 ntAPPRIS ALT1 TSL 5 BASIC31.24■■■□□ 2.59
RFX7Q2KHR2 MTCH1-202ENST00000373627 2057 ntAPPRIS P1 TSL 1 (best) BASIC31.23■■■□□ 2.59
RFX7Q2KHR2 PPP1CC-208ENST00000551676 1581 ntTSL 2 BASIC31.23■■■□□ 2.59
RFX7Q2KHR2 WHRN-203ENST00000374057 1718 ntTSL 2 BASIC31.23■■■□□ 2.59
RFX7Q2KHR2 SPATA5L1-208ENST00000638607 1863 ntTSL 2 BASIC31.22■■■□□ 2.59
RFX7Q2KHR2 PARD6A-201ENST00000219255 1248 ntAPPRIS P3 TSL 1 (best) BASIC31.21■■■□□ 2.59
RFX7Q2KHR2 ITPKA-201ENST00000260386 1824 ntAPPRIS P1 TSL 1 (best) BASIC31.21■■■□□ 2.59
RFX7Q2KHR2 COL13A1-214ENST00000522165 2061 ntAPPRIS ALT2 TSL 5 BASIC31.21■■■□□ 2.59
RFX7Q2KHR2 NPC2-207ENST00000555619 1035 ntAPPRIS P2 TSL 1 (best) BASIC31.21■■■□□ 2.59
RFX7Q2KHR2 TESK1-206ENST00000620767 2438 ntAPPRIS P1 TSL 5 BASIC31.2■■■□□ 2.59
RFX7Q2KHR2 HSD17B1P1-201ENST00000590052 955 ntBASIC31.19■■■□□ 2.58
RFX7Q2KHR2 R3HDM4-208ENST00000626716 138 ntTSL 5 BASIC31.19■■■□□ 2.58
RFX7Q2KHR2 AC135983.2-203ENST00000454486 1613 ntBASIC31.19■■■□□ 2.58
RFX7Q2KHR2 RUNX2-203ENST00000371436 1588 ntAPPRIS ALT2 TSL 5 BASIC31.19■■■□□ 2.58
RFX7Q2KHR2 METRNL-202ENST00000570778 967 ntTSL 5 BASIC31.18■■■□□ 2.58
RFX7Q2KHR2 FHL2-202ENST00000344213 1769 ntTSL 1 (best) BASIC31.18■■■□□ 2.58
RFX7Q2KHR2 HES6-205ENST00000409356 528 ntTSL 2 BASIC31.17■■■□□ 2.58
RFX7Q2KHR2 TNFSF12-201ENST00000293825 1553 ntAPPRIS P1 TSL 1 (best) BASIC31.17■■■□□ 2.58
RFX7Q2KHR2 MPP6-203ENST00000409761 1703 ntTSL 5 BASIC31.17■■■□□ 2.58
RFX7Q2KHR2 GKAP1-202ENST00000376365 1511 ntTSL 1 (best) BASIC31.17■■■□□ 2.58
RFX7Q2KHR2 ACTG1-210ENST00000575842 2256 ntAPPRIS P1 TSL 1 (best) BASIC31.17■■■□□ 2.58
RFX7Q2KHR2 LINC02323-201ENST00000559946 1603 ntTSL 3 BASIC31.16■■■□□ 2.58
RFX7Q2KHR2 ZFAND2B-208ENST00000409594 2021 ntTSL 2 BASIC31.15■■■□□ 2.58
RFX7Q2KHR2 ARHGAP22-202ENST00000374170 2107 ntTSL 5 BASIC31.15■■■□□ 2.58
RFX7Q2KHR2 CERS2-205ENST00000368954 2505 ntAPPRIS P1 TSL 1 (best) BASIC31.15■■■□□ 2.58
RFX7Q2KHR2 AC139426.1-201ENST00000568218 2529 ntBASIC31.14■■■□□ 2.58
RFX7Q2KHR2 CFAP73-201ENST00000335621 1514 ntAPPRIS P1 TSL 5 BASIC31.13■■■□□ 2.57
RFX7Q2KHR2 PHF20L1-207ENST00000395379 1998 ntTSL 5 BASIC31.13■■■□□ 2.57
RFX7Q2KHR2 HDGF-210ENST00000537739 2073 ntAPPRIS P1 TSL 1 (best) BASIC31.13■■■□□ 2.57
RFX7Q2KHR2 EID2-201ENST00000390658 1629 ntAPPRIS P1 BASIC31.13■■■□□ 2.57
RFX7Q2KHR2 STARD10-220ENST00000545082 1085 ntTSL 3 BASIC31.11■■■□□ 2.57
RFX7Q2KHR2 PCSK6-201ENST00000331826 2309 ntTSL 5 BASIC31.11■■■□□ 2.57
RFX7Q2KHR2 CHST14-202ENST00000559991 1968 ntTSL 5 BASIC31.1■■■□□ 2.57
RFX7Q2KHR2 WHAMMP2-203ENST00000563942 1603 ntBASIC31.1■■■□□ 2.57
RFX7Q2KHR2 GGA1-204ENST00000381756 2107 ntTSL 1 (best) BASIC31.1■■■□□ 2.57
RFX7Q2KHR2 NKX2-1-204ENST00000522719 1417 ntAPPRIS P1 TSL 1 (best) BASIC31.1■■■□□ 2.57
RFX7Q2KHR2 SHARPIN-202ENST00000398712 1765 ntAPPRIS P1 TSL 1 (best) BASIC31.09■■■□□ 2.57
RFX7Q2KHR2 MYCL-202ENST00000372816 1688 ntAPPRIS P3 TSL 2 BASIC31.09■■■□□ 2.57
RFX7Q2KHR2 INPP4A-203ENST00000409463 1565 ntTSL 1 (best) BASIC31.09■■■□□ 2.57
RFX7Q2KHR2 VEGFA-208ENST00000417285 1081 ntAPPRIS ALT2 TSL 1 (best) BASIC31.09■■■□□ 2.57
RFX7Q2KHR2 RASL10A-202ENST00000401450 1720 ntTSL 2 BASIC31.09■■■□□ 2.57
RFX7Q2KHR2 MAZ-208ENST00000563402 1461 ntTSL 5 BASIC31.08■■■□□ 2.57
RFX7Q2KHR2 MAZ-210ENST00000566906 1455 ntTSL 5 BASIC31.08■■■□□ 2.57
RFX7Q2KHR2 AC016595.1-201ENST00000559410 383 ntTSL 3 BASIC31.08■■■□□ 2.57
RFX7Q2KHR2 AC009041.3-201ENST00000564390 879 ntTSL 5 BASIC31.08■■■□□ 2.57
RFX7Q2KHR2 C16orf59-202ENST00000483320 1709 ntAPPRIS ALT2 TSL 2 BASIC31.07■■■□□ 2.57
RFX7Q2KHR2 MKRN1-202ENST00000443720 1601 ntAPPRIS ALT2 TSL 1 (best) BASIC31.07■■■□□ 2.56
RFX7Q2KHR2 HSD11B1L-202ENST00000339423 1660 ntAPPRIS P3 TSL 1 (best) BASIC31.07■■■□□ 2.56
RFX7Q2KHR2 ATP8B2-201ENST00000368487 1523 ntTSL 1 (best) BASIC31.06■■■□□ 2.56
Retrieved 100 of 98,524 protein–RNA pairs in 72.8 ms