Protein–RNA interactions for Protein: P78423

CX3CL1, Fractalkine, humanhuman

Predictions only

Length 397 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CX3CL1P78423 FAM220A-201ENST00000313324 2214 ntTSL 1 (best) BASIC20.49■□□□□ 0.87
CX3CL1P78423 FBXO45-201ENST00000311630 5899 ntAPPRIS P1 TSL 1 (best) BASIC20.49■□□□□ 0.87
CX3CL1P78423 PRELID2-207ENST00000511435 1894 ntAPPRIS ALT1 TSL 2 BASIC20.49■□□□□ 0.87
CX3CL1P78423 AP004833.2-201ENST00000532228 1454 ntBASIC20.49■□□□□ 0.87
CX3CL1P78423 ARHGAP22-202ENST00000374170 2107 ntTSL 5 BASIC20.48■□□□□ 0.87
CX3CL1P78423 FAM189B-210ENST00000621094 1335 ntTSL 1 (best) BASIC20.48■□□□□ 0.87
CX3CL1P78423 SMDT1-201ENST00000331479 1567 ntAPPRIS P1 TSL 1 (best) BASIC20.47■□□□□ 0.87
CX3CL1P78423 ST6GALNAC6-205ENST00000373146 2460 ntAPPRIS P3 TSL 1 (best) BASIC20.47■□□□□ 0.87
CX3CL1P78423 HOOK2-201ENST00000264827 2603 ntAPPRIS P1 TSL 1 (best) BASIC20.46■□□□□ 0.87
CX3CL1P78423 AP003068.2-202ENST00000526623 1662 ntTSL 2 BASIC20.46■□□□□ 0.87
CX3CL1P78423 NPHP3-202ENST00000383282 782 ntTSL 1 (best) BASIC20.46■□□□□ 0.87
CX3CL1P78423 C11orf80-204ENST00000525908 2135 ntAPPRIS P3 TSL 2 BASIC20.45■□□□□ 0.86
CX3CL1P78423 GABRA5-203ENST00000400081 2761 ntAPPRIS P1 TSL 5 BASIC20.45■□□□□ 0.86
CX3CL1P78423 DPY19L1-209ENST00000638088 5075 ntAPPRIS ALT2 TSL 5 BASIC20.45■□□□□ 0.86
CX3CL1P78423 DUX4L29-201ENST00000425409 679 ntBASIC20.45■□□□□ 0.86
CX3CL1P78423 JMJD8-202ENST00000562111 823 ntTSL 2 BASIC20.45■□□□□ 0.86
CX3CL1P78423 RAPGEF1-203ENST00000372195 6256 ntTSL 1 (best) BASIC20.44■□□□□ 0.86
CX3CL1P78423 BHLHE23-201ENST00000370346 1057 ntAPPRIS P1 BASIC20.44■□□□□ 0.86
CX3CL1P78423 HOXB3-201ENST00000311626 2642 ntAPPRIS P1 TSL 1 (best) BASIC20.43■□□□□ 0.86
CX3CL1P78423 PLSCR3-214ENST00000619711 2066 ntTSL 5 BASIC20.43■□□□□ 0.86
CX3CL1P78423 DNLZ-201ENST00000371738 724 ntAPPRIS P1 TSL 1 (best) BASIC20.43■□□□□ 0.86
CX3CL1P78423 AC004837.3-201ENST00000420748 565 ntTSL 4 BASIC20.43■□□□□ 0.86
CX3CL1P78423 RP9P-201ENST00000381639 1303 ntTSL 1 (best) BASIC20.43■□□□□ 0.86
CX3CL1P78423 IL17D-201ENST00000304920 1861 ntAPPRIS P1 TSL 1 (best) BASIC20.43■□□□□ 0.86
CX3CL1P78423 ADAP1-201ENST00000265846 2363 ntAPPRIS P1 TSL 1 (best) BASIC20.43■□□□□ 0.86
CX3CL1P78423 GKAP1-202ENST00000376365 1511 ntTSL 1 (best) BASIC20.43■□□□□ 0.86
CX3CL1P78423 PPP1CC-208ENST00000551676 1581 ntTSL 2 BASIC20.42■□□□□ 0.86
CX3CL1P78423 QDPR-201ENST00000281243 1648 ntAPPRIS P1 TSL 1 (best) BASIC20.42■□□□□ 0.86
CX3CL1P78423 NPB-202ENST00000573081 2154 ntAPPRIS ALT2 BASIC20.42■□□□□ 0.86
CX3CL1P78423 DPF1-202ENST00000412732 2303 ntTSL 1 (best) BASIC20.42■□□□□ 0.86
CX3CL1P78423 AC021231.2-201ENST00000594613 730 ntBASIC20.42■□□□□ 0.86
CX3CL1P78423 LINC00273-201ENST00000539813 1452 ntBASIC20.42■□□□□ 0.86
CX3CL1P78423 PKDCC-201ENST00000294964 2502 ntAPPRIS P1 TSL 1 (best) BASIC20.42■□□□□ 0.86
CX3CL1P78423 F8A3-201ENST00000622749 1759 ntAPPRIS P1 BASIC20.41■□□□□ 0.86
CX3CL1P78423 PRSS41-201ENST00000399677 1127 ntAPPRIS P1 TSL 5 BASIC20.41■□□□□ 0.86
CX3CL1P78423 VEGFA-226ENST00000611736 1239 ntTSL 1 (best) BASIC20.41■□□□□ 0.86
CX3CL1P78423 SHARPIN-202ENST00000398712 1765 ntAPPRIS P1 TSL 1 (best) BASIC20.41■□□□□ 0.86
CX3CL1P78423 PHF20L1-207ENST00000395379 1998 ntTSL 5 BASIC20.41■□□□□ 0.86
CX3CL1P78423 MNX1-201ENST00000252971 2174 ntAPPRIS P3 TSL 1 (best) BASIC20.4■□□□□ 0.86
CX3CL1P78423 DNPEP-201ENST00000273075 2425 ntAPPRIS P3 TSL 1 (best) BASIC20.4■□□□□ 0.86
CX3CL1P78423 HSD11B1L-202ENST00000339423 1660 ntAPPRIS P3 TSL 1 (best) BASIC20.4■□□□□ 0.86
CX3CL1P78423 NME2-202ENST00000393190 866 ntAPPRIS P1 TSL 1 (best) BASIC20.4■□□□□ 0.86
CX3CL1P78423 CCDC149-203ENST00000502801 1079 ntTSL 1 (best) BASIC20.4■□□□□ 0.86
CX3CL1P78423 CALM3-209ENST00000597743 577 ntTSL 4 BASIC20.4■□□□□ 0.86
CX3CL1P78423 TESK1-201ENST00000336395 2421 ntAPPRIS P1 TSL 1 (best) BASIC20.39■□□□□ 0.86
CX3CL1P78423 ITPKA-201ENST00000260386 1824 ntAPPRIS P1 TSL 1 (best) BASIC20.39■□□□□ 0.86
CX3CL1P78423 AC135983.2-203ENST00000454486 1613 ntBASIC20.39■□□□□ 0.86
CX3CL1P78423 SOX1-201ENST00000330949 2842 ntAPPRIS P1 BASIC20.39■□□□□ 0.85
CX3CL1P78423 HINT2-201ENST00000259667 628 ntAPPRIS P1 TSL 1 (best) BASIC20.39■□□□□ 0.85
CX3CL1P78423 U2AF1L5-201ENST00000610664 897 ntAPPRIS P5 TSL 1 (best) BASIC20.39■□□□□ 0.85
CX3CL1P78423 ZNF276-202ENST00000443381 2267 ntAPPRIS P1 TSL 1 (best) BASIC20.39■□□□□ 0.85
CX3CL1P78423 CFAP73-201ENST00000335621 1514 ntAPPRIS P1 TSL 5 BASIC20.38■□□□□ 0.85
CX3CL1P78423 CHST14-202ENST00000559991 1968 ntTSL 5 BASIC20.38■□□□□ 0.85
CX3CL1P78423 MPP6-203ENST00000409761 1703 ntTSL 5 BASIC20.38■□□□□ 0.85
CX3CL1P78423 C16orf59-202ENST00000483320 1709 ntAPPRIS ALT2 TSL 2 BASIC20.38■□□□□ 0.85
CX3CL1P78423 SLC35D2-201ENST00000253270 1613 ntAPPRIS P1 TSL 1 (best) BASIC20.38■□□□□ 0.85
CX3CL1P78423 CLK2-201ENST00000355560 2120 ntAPPRIS ALT1 TSL 5 BASIC20.38■□□□□ 0.85
CX3CL1P78423 DHRS13-202ENST00000394901 2037 ntTSL 1 (best) BASIC20.37■□□□□ 0.85
CX3CL1P78423 BMP7-204ENST00000450594 1857 ntTSL 2 BASIC20.37■□□□□ 0.85
CX3CL1P78423 THAP11-201ENST00000303596 2114 ntAPPRIS P1 BASIC20.37■□□□□ 0.85
CX3CL1P78423 ANKS1B-203ENST00000341752 2115 ntTSL 2 BASIC20.37■□□□□ 0.85
CX3CL1P78423 SLC35D2-202ENST00000375257 889 ntTSL 2 BASIC20.37■□□□□ 0.85
CX3CL1P78423 MAD2L2-207ENST00000376692 1118 ntAPPRIS P1 TSL 1 (best) BASIC20.37■□□□□ 0.85
CX3CL1P78423 AC004540.2-201ENST00000451368 611 ntTSL 2 BASIC20.37■□□□□ 0.85
CX3CL1P78423 EID2-201ENST00000390658 1629 ntAPPRIS P1 BASIC20.37■□□□□ 0.85
CX3CL1P78423 PLSCR3-209ENST00000574401 2032 ntAPPRIS P1 TSL 1 (best) BASIC20.37■□□□□ 0.85
CX3CL1P78423 INPP4A-203ENST00000409463 1565 ntTSL 1 (best) BASIC20.37■□□□□ 0.85
CX3CL1P78423 ZNF775-201ENST00000329630 2257 ntAPPRIS P1 TSL 1 (best) BASIC20.37■□□□□ 0.85
CX3CL1P78423 FHL2-202ENST00000344213 1769 ntTSL 1 (best) BASIC20.36■□□□□ 0.85
CX3CL1P78423 COL13A1-213ENST00000520267 2276 ntAPPRIS ALT2 TSL 5 BASIC20.36■□□□□ 0.85
CX3CL1P78423 LINC02323-201ENST00000559946 1603 ntTSL 3 BASIC20.36■□□□□ 0.85
CX3CL1P78423 PABPC1L2B-AS1-201ENST00000416989 1167 ntTSL 3 BASIC20.36■□□□□ 0.85
CX3CL1P78423 AL662864.1-201ENST00000454388 1167 ntTSL 3 BASIC20.36■□□□□ 0.85
CX3CL1P78423 TNFSF12-201ENST00000293825 1553 ntAPPRIS P1 TSL 1 (best) BASIC20.36■□□□□ 0.85
CX3CL1P78423 PLEKHJ1-201ENST00000326631 1206 ntAPPRIS P1 TSL 1 (best) BASIC20.35■□□□□ 0.85
CX3CL1P78423 HGH1-207ENST00000628266 258 ntTSL 5 BASIC20.35■□□□□ 0.85
CX3CL1P78423 WHRN-203ENST00000374057 1718 ntTSL 2 BASIC20.35■□□□□ 0.85
CX3CL1P78423 MKRN1-202ENST00000443720 1601 ntAPPRIS ALT2 TSL 1 (best) BASIC20.35■□□□□ 0.85
CX3CL1P78423 WHAMMP2-203ENST00000563942 1603 ntBASIC20.35■□□□□ 0.85
CX3CL1P78423 ARMC10-205ENST00000428183 2445 ntTSL 1 (best) BASIC20.34■□□□□ 0.85
CX3CL1P78423 GSC-201ENST00000238558 1264 ntAPPRIS P1 TSL 1 (best) BASIC20.34■□□□□ 0.85
CX3CL1P78423 MRPL9-201ENST00000368829 882 ntAPPRIS ALT2 TSL 2 BASIC20.34■□□□□ 0.85
CX3CL1P78423 AL589765.4-201ENST00000512280 382 ntTSL 3 BASIC20.34■□□□□ 0.85
CX3CL1P78423 ZNF706-207ENST00000519882 959 ntAPPRIS P1 TSL 3 BASIC20.34■□□□□ 0.85
CX3CL1P78423 ZNF706-213ENST00000521272 732 ntAPPRIS P1 TSL 5 BASIC20.34■□□□□ 0.85
CX3CL1P78423 MAZ-208ENST00000563402 1461 ntTSL 5 BASIC20.34■□□□□ 0.85
CX3CL1P78423 MAZ-210ENST00000566906 1455 ntTSL 5 BASIC20.34■□□□□ 0.85
CX3CL1P78423 CIB2-201ENST00000258930 1598 ntAPPRIS P1 TSL 1 (best) BASIC20.34■□□□□ 0.85
CX3CL1P78423 TMEM251-202ENST00000415050 1303 ntTSL 2 BASIC20.33■□□□□ 0.85
CX3CL1P78423 SLC35A1-203ENST00000369557 1653 ntTSL 2 BASIC20.33■□□□□ 0.85
CX3CL1P78423 H2AFV-204ENST00000350771 687 ntTSL 2 BASIC20.33■□□□□ 0.85
CX3CL1P78423 ZFAND2B-206ENST00000409336 944 ntAPPRIS P1 TSL 5 BASIC20.33■□□□□ 0.85
CX3CL1P78423 ZFAND2B-221ENST00000621130 1070 ntTSL 5 BASIC20.33■□□□□ 0.85
CX3CL1P78423 ADAT3-201ENST00000329478 1620 ntAPPRIS P1 TSL 1 (best) BASIC20.33■□□□□ 0.84
CX3CL1P78423 SDCCAG3-201ENST00000298537 2314 ntTSL 1 (best) BASIC20.33■□□□□ 0.84
CX3CL1P78423 NKX2-1-204ENST00000522719 1417 ntAPPRIS P1 TSL 1 (best) BASIC20.33■□□□□ 0.84
CX3CL1P78423 AC142086.6-201ENST00000621154 1765 ntBASIC20.33■□□□□ 0.84
CX3CL1P78423 FKBP1A-205ENST00000439640 1583 ntTSL 3 BASIC20.33■□□□□ 0.84
CX3CL1P78423 AC100797.4-201ENST00000631653 1827 ntBASIC20.32■□□□□ 0.84
CX3CL1P78423 MFSD12-201ENST00000355415 2124 ntAPPRIS P3 TSL 1 (best) BASIC20.32■□□□□ 0.84
Retrieved 100 of 98,524 protein–RNA pairs in 18.2 ms