Protein–RNA interactions for Protein: P51608

MECP2, Methyl-CpG-binding protein 2, humanhuman

Known RBP Predictions only

Length 486 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
MECP2P51608 CLK2-203ENST00000368361 2166 ntAPPRIS ALT1 TSL 1 (best) BASIC21.77■■□□□ 1.08
MECP2P51608 TANGO2-214ENST00000447208 2086 ntTSL 3 BASIC21.77■■□□□ 1.08
MECP2P51608 SAP30-201ENST00000296504 1108 ntAPPRIS P1 TSL 1 (best) BASIC21.77■■□□□ 1.08
MECP2P51608 MBD2-202ENST00000398398 1237 ntTSL 2 BASIC21.77■■□□□ 1.08
MECP2P51608 MBD2-205ENST00000583046 1182 ntTSL 1 (best) BASIC21.77■■□□□ 1.08
MECP2P51608 GATA3-AS1-201ENST00000355358 2214 ntTSL 2 BASIC21.77■■□□□ 1.08
MECP2P51608 SHD-201ENST00000543264 2577 ntAPPRIS P1 TSL 1 (best) BASIC21.77■■□□□ 1.08
MECP2P51608 GNAS-207ENST00000354359 1975 ntTSL 1 (best) BASIC21.76■■□□□ 1.07
MECP2P51608 GNAS-210ENST00000371085 1972 ntTSL 1 (best) BASIC21.76■■□□□ 1.07
MECP2P51608 PKM-203ENST00000389093 2279 ntTSL 5 BASIC21.76■■□□□ 1.07
MECP2P51608 AP001107.7-201ENST00000533287 272 ntTSL 2 BASIC21.76■■□□□ 1.07
MECP2P51608 MTMR1-202ENST00000370390 2755 ntAPPRIS P1 TSL 1 (best) BASIC21.76■■□□□ 1.07
MECP2P51608 SLC15A3-201ENST00000227880 2115 ntAPPRIS P1 TSL 1 (best) BASIC21.75■■□□□ 1.07
MECP2P51608 POU2F2-208ENST00000529952 1716 ntAPPRIS ALT2 TSL 1 (best) BASIC21.75■■□□□ 1.07
MECP2P51608 PPP1CC-208ENST00000551676 1581 ntTSL 2 BASIC21.74■■□□□ 1.07
MECP2P51608 PCK2-202ENST00000396973 1830 ntTSL 1 (best) BASIC21.74■■□□□ 1.07
MECP2P51608 ZNF692-201ENST00000306601 1931 ntAPPRIS P3 TSL 1 (best) BASIC21.74■■□□□ 1.07
MECP2P51608 AMZ2-201ENST00000359783 1722 ntTSL 5 BASIC21.74■■□□□ 1.07
MECP2P51608 PLEKHA8-201ENST00000258679 2293 ntTSL 1 (best) BASIC21.73■■□□□ 1.07
MECP2P51608 TRADD-201ENST00000345057 1877 ntAPPRIS P1 TSL 1 (best) BASIC21.73■■□□□ 1.07
MECP2P51608 P2RY2-202ENST00000393596 2174 ntAPPRIS P1 TSL 1 (best) BASIC21.73■■□□□ 1.07
MECP2P51608 MARCH11-201ENST00000332432 1741 ntAPPRIS P1 TSL 5 BASIC21.72■■□□□ 1.07
MECP2P51608 EBPL-203ENST00000378270 579 ntTSL 2 BASIC21.72■■□□□ 1.07
MECP2P51608 HSF1-204ENST00000528838 2142 ntAPPRIS P1 TSL 1 (best) BASIC21.72■■□□□ 1.07
MECP2P51608 AL031258.1-201ENST00000623562 325 ntBASIC21.72■■□□□ 1.07
MECP2P51608 FAM57A-202ENST00000308278 2412 ntAPPRIS P1 TSL 1 (best) BASIC21.72■■□□□ 1.07
MECP2P51608 CEBPB-201ENST00000303004 1956 ntAPPRIS P1 BASIC21.72■■□□□ 1.07
MECP2P51608 NPTXR-202ENST00000640136 1503 ntAPPRIS P2 TSL 1 (best) BASIC21.71■■□□□ 1.07
MECP2P51608 ACAA1-220ENST00000627515 1862 ntTSL 5 BASIC21.71■■□□□ 1.07
MECP2P51608 CHMP4B-201ENST00000217402 1646 ntAPPRIS P1 TSL 1 (best) BASIC21.71■■□□□ 1.07
MECP2P51608 MAGI2-217ENST00000629359 6704 ntTSL 5 BASIC21.71■■□□□ 1.07
MECP2P51608 AL355297.4-201ENST00000603191 1249 ntTSL 3 BASIC21.71■■□□□ 1.07
MECP2P51608 XKR6-201ENST00000297303 1550 ntTSL 1 (best) BASIC21.7■■□□□ 1.06
MECP2P51608 MAP3K3-210ENST00000584573 2480 ntTSL 1 (best) BASIC21.7■■□□□ 1.06
MECP2P51608 KCNC3-201ENST00000376959 5447 ntAPPRIS ALT2 TSL 5 BASIC21.7■■□□□ 1.06
MECP2P51608 PRKAR1B-203ENST00000403562 1917 ntAPPRIS P1 TSL 1 (best) BASIC21.69■■□□□ 1.06
MECP2P51608 HDAC3-201ENST00000305264 1959 ntAPPRIS P1 TSL 1 (best) BASIC21.69■■□□□ 1.06
MECP2P51608 SH3GL1-201ENST00000269886 2516 ntAPPRIS P1 TSL 1 (best) BASIC21.69■■□□□ 1.06
MECP2P51608 RSG1-201ENST00000375599 1545 ntAPPRIS P1 TSL 1 (best) BASIC21.69■■□□□ 1.06
MECP2P51608 RUNX2-205ENST00000465038 1770 ntAPPRIS P4 TSL 5 BASIC21.69■■□□□ 1.06
MECP2P51608 F8A3-201ENST00000622749 1759 ntAPPRIS P1 BASIC21.69■■□□□ 1.06
MECP2P51608 CTU1-201ENST00000421832 2087 ntAPPRIS P1 TSL 2 BASIC21.68■■□□□ 1.06
MECP2P51608 MAP6D1-202ENST00000431348 890 ntAPPRIS ALT2 TSL 2 BASIC21.68■■□□□ 1.06
MECP2P51608 DERA-201ENST00000428559 1705 ntAPPRIS P1 TSL 1 (best) BASIC21.68■■□□□ 1.06
MECP2P51608 LINC01003-201ENST00000564834 1764 ntBASIC21.68■■□□□ 1.06
MECP2P51608 FSD1L-208ENST00000495708 1906 ntTSL 1 (best) BASIC21.68■■□□□ 1.06
MECP2P51608 TTBK2-207ENST00000567840 1961 ntTSL 1 (best) BASIC21.68■■□□□ 1.06
MECP2P51608 DNAH9-209ENST00000579828 1986 ntTSL 2 BASIC21.68■■□□□ 1.06
MECP2P51608 AMIGO1-201ENST00000369862 2229 ntAPPRIS P1 TSL 5 BASIC21.67■■□□□ 1.06
MECP2P51608 SNAI3-AS1-204ENST00000567997 2048 ntBASIC21.67■■□□□ 1.06
MECP2P51608 MXRA7-203ENST00000449428 1881 ntAPPRIS ALT2 TSL 1 (best) BASIC21.67■■□□□ 1.06
MECP2P51608 SLCO3A1-201ENST00000318445 5115 ntAPPRIS P1 TSL 1 (best) BASIC21.66■■□□□ 1.06
MECP2P51608 PELI3-203ENST00000524466 1671 ntTSL 1 (best) BASIC21.66■■□□□ 1.06
MECP2P51608 ABHD17C-202ENST00000558464 1976 ntTSL 1 (best) BASIC21.66■■□□□ 1.06
MECP2P51608 PICALM-224ENST00000630913 2261 ntTSL 5 BASIC21.66■■□□□ 1.06
MECP2P51608 RUNX2-203ENST00000371436 1588 ntAPPRIS ALT2 TSL 5 BASIC21.65■■□□□ 1.06
MECP2P51608 ANKRD65-205ENST00000537107 2190 ntAPPRIS P1 TSL 5 BASIC21.65■■□□□ 1.06
MECP2P51608 FAH-213ENST00000561421 1549 ntAPPRIS P1 TSL 1 (best) BASIC21.65■■□□□ 1.06
MECP2P51608 CTSA-203ENST00000372459 1972 ntTSL 1 (best) BASIC21.65■■□□□ 1.06
MECP2P51608 GLRB-203ENST00000509282 1757 ntAPPRIS P1 TSL 1 (best) BASIC21.65■■□□□ 1.06
MECP2P51608 AC091060.1-201ENST00000623524 1766 ntBASIC21.65■■□□□ 1.06
MECP2P51608 ZNF653-201ENST00000293771 2240 ntAPPRIS P1 TSL 1 (best) BASIC21.65■■□□□ 1.06
MECP2P51608 ANKS1B-203ENST00000341752 2115 ntTSL 2 BASIC21.65■■□□□ 1.06
MECP2P51608 UCK1-204ENST00000372215 2167 ntAPPRIS P1 TSL 1 (best) BASIC21.64■■□□□ 1.06
MECP2P51608 SLC35A1-203ENST00000369557 1653 ntTSL 2 BASIC21.64■■□□□ 1.05
MECP2P51608 KLF3-AS1-202ENST00000440181 2368 ntTSL 2 BASIC21.64■■□□□ 1.05
MECP2P51608 SSBP4-206ENST00000599699 793 ntTSL 2 BASIC21.64■■□□□ 1.05
MECP2P51608 MAZ-202ENST00000322945 2532 ntAPPRIS ALT2 TSL 1 (best) BASIC21.63■■□□□ 1.05
MECP2P51608 TOP1MT-208ENST00000519148 1868 ntTSL 2 BASIC21.63■■□□□ 1.05
MECP2P51608 GAL3ST1-204ENST00000402369 1712 ntAPPRIS P1 TSL 3 BASIC21.63■■□□□ 1.05
MECP2P51608 HMGB1-205ENST00000399494 1282 ntAPPRIS P1 TSL 2 BASIC21.62■■□□□ 1.05
MECP2P51608 PCYT2-206ENST00000571105 1628 ntTSL 5 BASIC21.62■■□□□ 1.05
MECP2P51608 EBF4-210ENST00000609451 2012 ntAPPRIS ALT1 TSL 5 BASIC21.62■■□□□ 1.05
MECP2P51608 D2HGDH-203ENST00000403782 2208 ntTSL 2 BASIC21.61■■□□□ 1.05
MECP2P51608 NELFB-201ENST00000343053 2698 ntAPPRIS ALT2 TSL 1 (best) BASIC21.61■■□□□ 1.05
MECP2P51608 CPLX1-203ENST00000505203 2011 ntTSL 2 BASIC21.61■■□□□ 1.05
MECP2P51608 HRH3-201ENST00000317393 1419 ntAPPRIS ALT2 TSL 1 (best) BASIC21.61■■□□□ 1.05
MECP2P51608 FOXP4-203ENST00000373060 5948 ntTSL 5 BASIC21.61■■□□□ 1.05
MECP2P51608 FOXP4-204ENST00000373063 5910 ntTSL 1 (best) BASIC21.61■■□□□ 1.05
MECP2P51608 NOP53-201ENST00000246802 1528 ntAPPRIS P1 TSL 1 (best) BASIC21.6■■□□□ 1.05
MECP2P51608 FHL2-202ENST00000344213 1769 ntTSL 1 (best) BASIC21.6■■□□□ 1.05
MECP2P51608 TSKU-201ENST00000333090 2712 ntAPPRIS P1 TSL 1 (best) BASIC21.6■■□□□ 1.05
MECP2P51608 CDC16-204ENST00000360383 2211 ntAPPRIS P3 TSL 5 BASIC21.6■■□□□ 1.05
MECP2P51608 MAD2L2-201ENST00000235310 1860 ntAPPRIS P1 TSL 2 BASIC21.6■■□□□ 1.05
MECP2P51608 HNRNPAB-205ENST00000506259 1674 ntAPPRIS ALT2 TSL 1 (best) BASIC21.6■■□□□ 1.05
MECP2P51608 C8orf58-206ENST00000614574 1955 ntAPPRIS ALT2 TSL 5 BASIC21.59■■□□□ 1.05
MECP2P51608 ARMC10-208ENST00000441711 2524 ntAPPRIS P1 TSL 1 (best) BASIC21.59■■□□□ 1.05
MECP2P51608 AC113189.4-201ENST00000575331 5553 ntTSL 1 (best) BASIC21.58■■□□□ 1.05
MECP2P51608 MXD3-203ENST00000439742 1483 ntAPPRIS P1 TSL 1 (best) BASIC21.58■■□□□ 1.05
MECP2P51608 AP004833.2-201ENST00000532228 1454 ntBASIC21.58■■□□□ 1.05
MECP2P51608 ALG2-203ENST00000476832 1880 ntAPPRIS P1 TSL 1 (best) BASIC21.58■■□□□ 1.05
MECP2P51608 AC020928.2-201ENST00000588717 2197 ntBASIC21.57■■□□□ 1.04
MECP2P51608 FAM89B-201ENST00000316409 1409 ntTSL 1 (best) BASIC21.57■■□□□ 1.04
MECP2P51608 NAT8L-202ENST00000423729 5870 ntAPPRIS P1 TSL 1 (best) BASIC21.57■■□□□ 1.04
MECP2P51608 ACSS1-203ENST00000432802 2438 ntTSL 2 BASIC21.57■■□□□ 1.04
MECP2P51608 PTPRM-201ENST00000332175 6095 ntAPPRIS P3 TSL 1 (best) BASIC21.56■■□□□ 1.04
MECP2P51608 HTRA1-201ENST00000368984 2120 ntAPPRIS P1 TSL 1 (best) BASIC21.56■■□□□ 1.04
MECP2P51608 ACSS1-202ENST00000376726 2244 ntTSL 2 BASIC21.56■■□□□ 1.04
MECP2P51608 PPP1R14C-201ENST00000361131 2152 ntAPPRIS P1 TSL 1 (best) BASIC21.56■■□□□ 1.04
MECP2P51608 ANAPC11-203ENST00000392376 687 ntAPPRIS P1 TSL 1 (best) BASIC21.56■■□□□ 1.04
Retrieved 100 of 98,524 protein–RNA pairs in 32.8 ms