Protein–RNA interactions for Protein: P47023

TY4A-J, Transposon Ty4-J Gag polyprotein, yeastyeast

Predictions only

Length 414 aa.

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Protein RNA Prediction (catRAPID) Interaction (RIP-Chip)
Gene UniProt Accession Gene Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score Detected Interaction
TY4A-JP47023 IPL1YPL209C 1104 nt8.33□□□□□ -1.08
TY4A-JP47023 FIT1YDR534C 1587 nt8.31□□□□□ -1.08
TY4A-JP47023 GPA1YHR005C 1419 nt8.3□□□□□ -1.08
TY4A-JP47023 SWM1YDR260C 513 nt8.3□□□□□ -1.08
TY4A-JP47023 UFD1YGR048W 1086 nt8.3□□□□□ -1.08
TY4A-JP47023 PHB2YGR231C 933 nt8.3□□□□□ -1.08
TY4A-JP47023 FSH2YMR222C 672 nt8.3□□□□□ -1.08
TY4A-JP47023 DPL1YDR294C 1770 nt8.3□□□□□ -1.08
TY4A-JP47023 FET5YFL041W 1869 nt8.3□□□□□ -1.08
TY4A-JP47023 YCP4YCR004C 744 nt8.29□□□□□ -1.08
TY4A-JP47023 RMA1YKL132C 1293 nt8.29□□□□□ -1.08
TY4A-JP47023 YNR064CYNR064C 873 nt8.29□□□□□ -1.08
TY4A-JP47023 YOR041CYOR041C 432 nt8.29□□□□□ -1.08
TY4A-JP47023 FLX1YIL134W 936 nt8.28□□□□□ -1.08
TY4A-JP47023 REC114YMR133W 1287 nt8.27□□□□□ -1.09
TY4A-JP47023 AMF1YOR378W 1548 nt8.27□□□□□ -1.09
TY4A-JP47023 RGT2YDL138W 2292 nt8.27□□□□□ -1.09
TY4A-JP47023 ITR2YOL103W 1830 nt8.26□□□□□ -1.09
TY4A-JP47023 LEU4YNL104C 1860 nt8.26□□□□□ -1.09
TY4A-JP47023 ADH3YMR083W 1128 nt8.26□□□□□ -1.09
TY4A-JP47023 BEM1YBR200W 1656 nt8.25□□□□□ -1.09
TY4A-JP47023 RIB1YBL033C 1038 nt8.25□□□□□ -1.09
TY4A-JP47023 SWT21YNL187W 1074 nt8.25□□□□□ -1.09
TY4A-JP47023 CIT3YPR001W 1461 nt8.25□□□□□ -1.09
TY4A-JP47023 YRF1-1YDR545W 5391 nt8.24□□□□□ -1.09
TY4A-JP47023 YRF1-5YLR467W 5391 nt8.24□□□□□ -1.09
TY4A-JP47023 YRF1-8YOR396W 5391 nt8.24□□□□□ -1.09
TY4A-JP47023 NMD5YJR132W 3147 nt8.24□□□□□ -1.09
TY4A-JP47023 TPC1YGR096W 945 nt8.24□□□□□ -1.09
TY4A-JP47023 SPE2YOL052C 1191 nt8.24□□□□□ -1.09
TY4A-JP47023 ORT1YOR130C 879 nt8.24□□□□□ -1.09
TY4A-JP47023 SNX3YOR357C 489 nt8.24□□□□□ -1.09
TY4A-JP47023 SAM50YNL026W 1455 nt8.24□□□□□ -1.09
TY4A-JP47023 HGH1YGR187C 1185 nt8.23□□□□□ -1.09
TY4A-JP47023 YIA6YIL006W 1122 nt8.23□□□□□ -1.09
TY4A-JP47023 KRE1YNL322C 942 nt8.23□□□□□ -1.09
TY4A-JP47023 YCR061WYCR061W 1896 nt8.23□□□□□ -1.09
TY4A-JP47023 ATG22YCL038C 1587 nt8.22□□□□□ -1.09
TY4A-JP47023 YCR025CYCR025C 411 nt8.22□□□□□ -1.09
TY4A-JP47023 LYS20YDL182W 1287 nt8.22□□□□□ -1.09
TY4A-JP47023 SHO1YER118C 1104 nt8.22□□□□□ -1.09
TY4A-JP47023 YIP4YGL198W 708 nt8.22□□□□□ -1.09
TY4A-JP47023 BNS1YGR230W 414 nt8.21□□□□□ -1.1
TY4A-JP47023 ELO1YJL196C 933 nt8.21□□□□□ -1.1
TY4A-JP47023 YNL067W-AYNL067W-A 147 nt8.21□□□□□ -1.1
TY4A-JP47023 LRO1YNR008W 1986 nt8.21□□□□□ -1.1
TY4A-JP47023 KEL3YPL263C 1956 nt8.21□□□□□ -1.1
TY4A-JP47023 NPP2YEL016C 1482 nt8.2□□□□□ -1.1
TY4A-JP47023 YBR226CYBR226C 411 nt8.2□□□□□ -1.1
TY4A-JP47023 ENO2YHR174W 1314 nt8.2□□□□□ -1.1
TY4A-JP47023 tE(CUC)DtE(CUC)D 72 nt8.19□□□□□ -1.1
TY4A-JP47023 tE(CUC)ItE(CUC)I 72 nt8.19□□□□□ -1.1
TY4A-JP47023 ERG6YML008C 1152 nt8.19□□□□□ -1.1
TY4A-JP47023 IDP3YNL009W 1263 nt8.19□□□□□ -1.1
TY4A-JP47023 LEU2YCL018W 1095 nt8.19□□□□□ -1.1
TY4A-JP47023 YHM2YMR241W 945 nt8.18□□□□□ -1.1
TY4A-JP47023 ADE16YLR028C 1776 nt8.17□□□□□ -1.1
TY4A-JP47023 POP2YNR052C 1302 nt8.17□□□□□ -1.1
TY4A-JP47023 NAM8YHR086W 1572 nt8.17□□□□□ -1.1
TY4A-JP47023 SDS24YBR214W 1584 nt8.17□□□□□ -1.1
TY4A-JP47023 SER2YGR208W 930 nt8.16□□□□□ -1.1
TY4A-JP47023 KDX1YKL161C 1302 nt8.16□□□□□ -1.1
TY4A-JP47023 DUS3YLR401C 2007 nt8.16□□□□□ -1.1
TY4A-JP47023 ATP4YPL078C 735 nt8.16□□□□□ -1.1
TY4A-JP47023 YDR467CYDR467C 327 nt8.15□□□□□ -1.1
TY4A-JP47023 SOD2YHR008C 702 nt8.15□□□□□ -1.1
TY4A-JP47023 ADE17YMR120C 1779 nt8.15□□□□□ -1.11
TY4A-JP47023 HXT11YOL156W 1704 nt8.15□□□□□ -1.11
TY4A-JP47023 VBA3YCL069W 1377 nt8.14□□□□□ -1.11
TY4A-JP47023 YMR265CYMR265C 1386 nt8.14□□□□□ -1.11
TY4A-JP47023 MOB1YIL106W 945 nt8.14□□□□□ -1.11
TY4A-JP47023 CYC3YAL039C 810 nt8.13□□□□□ -1.11
TY4A-JP47023 YKR012CYKR012C 378 nt8.13□□□□□ -1.11
TY4A-JP47023 ATG17YLR423C 1254 nt8.13□□□□□ -1.11
TY4A-JP47023 HAP5YOR358W 729 nt8.13□□□□□ -1.11
TY4A-JP47023 PRP2YNR011C 2631 nt8.13□□□□□ -1.11
TY4A-JP47023 FRT1YOR324C 1809 nt8.13□□□□□ -1.11
TY4A-JP47023 SRP102YKL154W 735 nt8.12□□□□□ -1.11
TY4A-JP47023 snR4snR4 186 nt8.12□□□□□ -1.11
TY4A-JP47023 CDC16YKL022C 2523 nt8.12□□□□□ -1.11
TY4A-JP47023 TRP2YER090W 1524 nt8.12□□□□□ -1.11
TY4A-JP47023 MET30YIL046W 1923 nt8.11□□□□□ -1.11
TY4A-JP47023 YER152W-AYER152W-A 567 nt8.11□□□□□ -1.11
TY4A-JP47023 YKL053WYKL053W 375 nt8.11□□□□□ -1.11
TY4A-JP47023 REX2YLR059C 810 nt8.11□□□□□ -1.11
TY4A-JP47023 ADH6YMR318C 1083 nt8.11□□□□□ -1.11
TY4A-JP47023 CRC1YOR100C 984 nt8.11□□□□□ -1.11
TY4A-JP47023 HTS1YPR033C 1641 nt8.1□□□□□ -1.11
TY4A-JP47023 SAN1YDR143C 1833 nt8.09□□□□□ -1.11
TY4A-JP47023 RPN14YGL004C 1254 nt8.08□□□□□ -1.12
TY4A-JP47023 YNL017CYNL017C 339 nt8.08□□□□□ -1.12
TY4A-JP47023 snR31snR31 225 nt8.08□□□□□ -1.12
TY4A-JP47023 PMA2YPL036W 2844 nt8.08□□□□□ -1.12
TY4A-JP47023 YMR007WYMR007W 381 nt8.07□□□□□ -1.12
TY4A-JP47023 YNL165WYNL165W 1221 nt8.07□□□□□ -1.12
TY4A-JP47023 ENO1YGR254W 1314 nt8.06□□□□□ -1.12
TY4A-JP47023 DIA4YHR011W 1341 nt8.06□□□□□ -1.12
TY4A-JP47023 YNL190WYNL190W 615 nt8.06□□□□□ -1.12
TY4A-JP47023 SRP54YPR088C 1626 nt8.06□□□□□ -1.12
TY4A-JP47023 POX1YGL205W 2247 nt8.06□□□□□ -1.12
Retrieved 100 of 7,029 protein–RNA pairs in 8.7 ms